FFCP PHASE1:Hg19::chr20:9494928..9494945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=-59bp_to_NM_001199897,NM_012261_5end | |association_with_transcript=-59bp_to_NM_001199897,NM_012261_5end | ||
|cluster_id=chr20:9494928..9494945,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_6_at_LAMP5_5end | |description=CAGE_peak_6_at_LAMP5_5end | ||
|id=chr20:9494928..9494945,+ | |id=chr20:9494928..9494945,+ | ||
|ontology_enrichment_celltype=CL:0000784!2.90e-08!3 | |ontology_enrichment_celltype=CL:0000784!2.90e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.69e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.86e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.85e-14;82!UBERON:0010122;1.25e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.35e-63!57;UBERON:0005068!3.35e-63!57;UBERON:0006241!3.35e-63!57;UBERON:0007135!3.35e-63!57;UBERON:0002616!8.95e-52!59;UBERON:0001017!1.90e-51!82;UBERON:0005743!7.89e-51!86;UBERON:0000955!1.35e-49!69;UBERON:0006238!1.35e-49!69;UBERON:0000073!3.21e-49!94;UBERON:0001016!3.21e-49!94;UBERON:0001893!3.58e-49!34;UBERON:0002020!4.95e-49!34;UBERON:0003528!4.95e-49!34;UBERON:0001869!5.01e-49!32;UBERON:0002791!4.53e-47!33;UBERON:0007023!3.46e-46!115;UBERON:0002780!3.67e-46!41;UBERON:0001890!3.67e-46!41;UBERON:0006240!3.67e-46!41;UBERON:0003080!7.20e-45!42;UBERON:0003075!2.14e-44!86;UBERON:0007284!2.14e-44!86;UBERON:0002346!7.26e-42!90;UBERON:0002619!1.30e-38!22;UBERON:0001950!4.46e-34!20;UBERON:0000956!1.88e-33!25;UBERON:0000203!1.88e-33!25;UBERON:0003056!2.31e-30!61;UBERON:0000033!4.57e-27!123;UBERON:0000153!1.39e-26!129;UBERON:0007811!1.39e-26!129;UBERON:0004121!9.82e-23!169;UBERON:0000924!6.66e-22!173;UBERON:0006601!6.66e-22!173;UBERON:0003076!9.27e-19!15;UBERON:0003057!9.27e-19!15;UBERON:0002420!5.40e-18!9;UBERON:0007245!5.40e-18!9;UBERON:0010009!5.40e-18!9;UBERON:0010011!5.40e-18!9;UBERON:0000454!5.40e-18!9;UBERON:0002308!4.81e-17!9;UBERON:0000125!4.81e-17!9;UBERON:0000200!5.67e-15!6;UBERON:0001871!7.48e-15!7;UBERON:0000349!1.65e-13!5;UBERON:0004733!1.99e-13!12;UBERON:0002028!1.99e-13!12;UBERON:0007277!1.99e-13!12;UBERON:0009663!2.64e-13!7;UBERON:0004732!2.94e-12!13;UBERON:0001872!4.91e-12!5;UBERON:0000025!5.07e-12!194;UBERON:0000369!1.95e-11!4;UBERON:0002435!1.95e-11!4;UBERON:0000204!1.95e-11!4;UBERON:0010082!1.95e-11!4;UBERON:0004111!4.50e-10!241;UBERON:0002298!1.12e-09!8;UBERON:0005383!5.23e-09!3;UBERON:0005382!5.23e-09!3;UBERON:0002771!2.70e-08!3;UBERON:0002680!2.80e-08!9;UBERON:0001895!2.80e-08!9;UBERON:0010092!2.80e-08!9;UBERON:0000477!9.01e-08!286;UBERON:0001896!2.08e-07!3;UBERON:0005290!2.08e-07!3;UBERON:0010096!2.08e-07!3;UBERON:0000988!2.13e-07!3;UBERON:0000064!2.22e-07!219;UBERON:0002240!2.49e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.35e-63!57;UBERON:0005068!3.35e-63!57;UBERON:0006241!3.35e-63!57;UBERON:0007135!3.35e-63!57;UBERON:0002616!8.95e-52!59;UBERON:0001017!1.90e-51!82;UBERON:0005743!7.89e-51!86;UBERON:0000955!1.35e-49!69;UBERON:0006238!1.35e-49!69;UBERON:0000073!3.21e-49!94;UBERON:0001016!3.21e-49!94;UBERON:0001893!3.58e-49!34;UBERON:0002020!4.95e-49!34;UBERON:0003528!4.95e-49!34;UBERON:0001869!5.01e-49!32;UBERON:0002791!4.53e-47!33;UBERON:0007023!3.46e-46!115;UBERON:0002780!3.67e-46!41;UBERON:0001890!3.67e-46!41;UBERON:0006240!3.67e-46!41;UBERON:0003080!7.20e-45!42;UBERON:0003075!2.14e-44!86;UBERON:0007284!2.14e-44!86;UBERON:0002346!7.26e-42!90;UBERON:0002619!1.30e-38!22;UBERON:0001950!4.46e-34!20;UBERON:0000956!1.88e-33!25;UBERON:0000203!1.88e-33!25;UBERON:0003056!2.31e-30!61;UBERON:0000033!4.57e-27!123;UBERON:0000153!1.39e-26!129;UBERON:0007811!1.39e-26!129;UBERON:0004121!9.82e-23!169;UBERON:0000924!6.66e-22!173;UBERON:0006601!6.66e-22!173;UBERON:0003076!9.27e-19!15;UBERON:0003057!9.27e-19!15;UBERON:0002420!5.40e-18!9;UBERON:0007245!5.40e-18!9;UBERON:0010009!5.40e-18!9;UBERON:0010011!5.40e-18!9;UBERON:0000454!5.40e-18!9;UBERON:0002308!4.81e-17!9;UBERON:0000125!4.81e-17!9;UBERON:0000200!5.67e-15!6;UBERON:0001871!7.48e-15!7;UBERON:0000349!1.65e-13!5;UBERON:0004733!1.99e-13!12;UBERON:0002028!1.99e-13!12;UBERON:0007277!1.99e-13!12;UBERON:0009663!2.64e-13!7;UBERON:0004732!2.94e-12!13;UBERON:0001872!4.91e-12!5;UBERON:0000025!5.07e-12!194;UBERON:0000369!1.95e-11!4;UBERON:0002435!1.95e-11!4;UBERON:0000204!1.95e-11!4;UBERON:0010082!1.95e-11!4;UBERON:0004111!4.50e-10!241;UBERON:0002298!1.12e-09!8;UBERON:0005383!5.23e-09!3;UBERON:0005382!5.23e-09!3;UBERON:0002771!2.70e-08!3;UBERON:0002680!2.80e-08!9;UBERON:0001895!2.80e-08!9;UBERON:0010092!2.80e-08!9;UBERON:0000477!9.01e-08!286;UBERON:0001896!2.08e-07!3;UBERON:0005290!2.08e-07!3;UBERON:0010096!2.08e-07!3;UBERON:0000988!2.13e-07!3;UBERON:0000064!2.22e-07!219;UBERON:0002240!2.49e-07!3 | ||
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|short_description=p6@LAMP5 | |short_description=p6@LAMP5 | ||
}} | }} |
Latest revision as of 17:27, 17 September 2015
Short description: | p6@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -59bp_to_NM_001199897, NM_012261_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.86e-12 | 3 |