FFCP PHASE1:Hg19::chr21:27462289..27462323,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:27462289..27462323,-
|short_description=p4@APP
|description=CAGE_peak_4_at_APP_5end
|association_with_transcript=52bp_to_M28373_5end
|EntrezGene=351
|HG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt=P05067 | |UniProt=P05067 | ||
|association_with_transcript=52bp_to_M28373_5end | |||
|cluster_id=chr21:27462289..27462323,- | |||
|coexpression_cluster_id=C1073 | |||
|description=CAGE_peak_4_at_APP_5end | |||
|id=chr21:27462289..27462323,- | |||
|ontology_enrichment_celltype=CL:0000066!5.09e-11!254;CL:0002321!1.98e-09!248;CL:0000220!3.70e-09!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.33e-10,253;CL:0002321,5.88e-09,250;CL:0000213,3.98e-07,58;CL:0000215,3.98e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.06e-20!659;UBERON:0000477!2.59e-17!286;UBERON:0004111!3.37e-17!241;UBERON:0000922!8.40e-16!612;UBERON:0000467!1.55e-15!625;UBERON:0000480!3.46e-15!626;UBERON:0002050!4.65e-14!605;UBERON:0005423!4.65e-14!605;UBERON:0000923!1.11e-13!604;UBERON:0005291!1.11e-13!604;UBERON:0006598!1.11e-13!604;UBERON:0002532!1.11e-13!604;UBERON:0000483!2.62e-13!309;UBERON:0000119!7.78e-13!312;UBERON:0000481!9.07e-13!347;UBERON:0000025!1.92e-12!194;UBERON:0000475!2.27e-11!365;UBERON:0001049!3.36e-11!57;UBERON:0005068!3.36e-11!57;UBERON:0006241!3.36e-11!57;UBERON:0007135!3.36e-11!57;UBERON:0002020!3.87e-11!34;UBERON:0003528!3.87e-11!34;UBERON:0001893!1.10e-10!34;UBERON:0002791!1.77e-10!33;UBERON:0000924!2.50e-10!173;UBERON:0006601!2.50e-10!173;UBERON:0002780!2.64e-10!41;UBERON:0001890!2.64e-10!41;UBERON:0006240!2.64e-10!41;UBERON:0001869!5.45e-10!32;UBERON:0004121!7.42e-10!169;UBERON:0007023!7.67e-10!115;UBERON:0002616!1.41e-09!59;UBERON:0003080!1.72e-09!42;UBERON:0001017!2.78e-09!82;UBERON:0002346!3.91e-09!90;UBERON:0005743!4.91e-09!86;UBERON:0003075!1.16e-08!86;UBERON:0007284!1.16e-08!86;UBERON:0000955!1.61e-08!69;UBERON:0006238!1.61e-08!69;UBERON:0000033!2.34e-08!123;UBERON:0002619!2.88e-08!22;UBERON:0000073!3.29e-08!94;UBERON:0001016!3.29e-08!94;UBERON:0001950!3.30e-08!20;UBERON:0000956!3.46e-08!25;UBERON:0000203!3.46e-08!25;UBERON:0000062!3.54e-08!511;UBERON:0000153!1.92e-07!129;UBERON:0007811!1.92e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.24e-09;34!UBERON:0002020;1.24e-09;34!UBERON:0002791;1.86e-09;32!UBERON:0001893;3.50e-09;34!UBERON:0001869;3.51e-09;32!UBERON:0002619;2.46e-08;22!UBERON:0000956;2.55e-08;25!UBERON:0000203;2.55e-08;25!UBERON:0001950;2.65e-08;20!UBERON:0002780;1.74e-07;41!UBERON:0001890;1.74e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.10e-16,240;UBERON:0000483,8.56e-13,306;UBERON:0000119,3.67e-12,309;UBERON:0001049,4.66e-12,56;UBERON:0005068,4.66e-12,56;UBERON:0006241,4.66e-12,56;UBERON:0007135,4.66e-12,56;UBERON:0003528,1.66e-11,34;UBERON:0002020,1.66e-11,34;UBERON:0000025,2.88e-11,192;UBERON:0000073,3.35e-11,53;UBERON:0002616,3.35e-11,53;UBERON:0001893,4.93e-11,34;UBERON:0000922,8.30e-11,592;UBERON:0004121,1.00e-10,171;UBERON:0000924,1.00e-10,171;UBERON:0006601,1.00e-10,171;UBERON:0010371,1.05e-10,104;UBERON:0002791,1.28e-10,32;UBERON:0010314,2.23e-10,132;UBERON:0002780,2.40e-10,41;UBERON:0001890,2.40e-10,41;UBERON:0003080,2.40e-10,41;UBERON:0006240,2.40e-10,41;UBERON:0001869,2.59e-10,32;UBERON:0002346,7.82e-10,86;UBERON:0002050,8.81e-10,564;UBERON:0011216,1.20e-09,223;UBERON:0001017,1.33e-09,81;UBERON:0005423,1.39e-09,581;UBERON:0003075,2.44e-09,82;UBERON:0007284,2.44e-09,82;UBERON:0000923,3.56e-09,560;UBERON:0010316,3.56e-09,560;UBERON:0005291,3.56e-09,560;UBERON:0006598,3.56e-09,560;UBERON:0010317,3.56e-09,560;UBERON:0002532,3.56e-09,560;UBERON:0007023,5.44e-09,114;UBERON:0000955,1.30e-08,68;UBERON:0006238,1.30e-08,68;UBERON:0001016,1.52e-08,89;UBERON:0002619,1.59e-08,22;UBERON:0001950,1.83e-08,20;UBERON:0000956,1.92e-08,25;UBERON:0000203,1.92e-08,25;UBERON:0003056,8.49e-07,61 | |||
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|short_description=p4@APP | |||
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Latest revision as of 23:10, 17 September 2015
Short description: | p4@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | 52bp_to_M28373_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | P05067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.33e-10 | 253 |
embryonic cell | 5.88e-09 | 250 |
lining cell | 3.98e-07 | 58 |
barrier cell | 3.98e-07 | 58 |