FFCP PHASE1:Hg19::chr11:33397623..33397662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:33397623..33397662,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_at_chr11:33397623..33397662,+ | |description=CAGE_peak_at_chr11:33397623..33397662,+ | ||
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|ontology_enrichment_celltype=CL:0000055!9.41e-22!180;CL:0000220!5.00e-14!246;CL:0002321!7.12e-14!248;CL:0000057!7.91e-12!75;CL:0000222!1.55e-11!119;CL:0000359!4.38e-09!32;CL:0000393!1.11e-08!60;CL:0000211!1.11e-08!60;CL:0000183!5.24e-08!59;CL:0000680!9.32e-08!57;CL:0000056!9.32e-08!57;CL:0000355!9.32e-08!57;CL:0000071!9.58e-08!18;CL:0002546!9.58e-08!18;CL:0000187!1.00e-07!54;CL:0002139!1.17e-07!24;CL:0002620!1.55e-07!23;CL:0000192!6.25e-07!42;CL:0000514!6.25e-07!42 | |ontology_enrichment_celltype=CL:0000055!9.41e-22!180;CL:0000220!5.00e-14!246;CL:0002321!7.12e-14!248;CL:0000057!7.91e-12!75;CL:0000222!1.55e-11!119;CL:0000359!4.38e-09!32;CL:0000393!1.11e-08!60;CL:0000211!1.11e-08!60;CL:0000183!5.24e-08!59;CL:0000680!9.32e-08!57;CL:0000056!9.32e-08!57;CL:0000355!9.32e-08!57;CL:0000071!9.58e-08!18;CL:0002546!9.58e-08!18;CL:0000187!1.00e-07!54;CL:0002139!1.17e-07!24;CL:0002620!1.55e-07!23;CL:0000192!6.25e-07!42;CL:0000514!6.25e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.45e-09;32!CL:0000071;8.02e-08;18!CL:0002139;8.18e-08;24!CL:0002620;2.58e-07;23 | |ontology_enrichment_celltype_v019=CL:0000359;2.45e-09;32!CL:0000071;8.02e-08;18!CL:0002139;8.18e-08;24!CL:0002620;2.58e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.14e-11,76;CL:0002321,2.23e-11,250;CL:0000222,3.10e-10,121;CL:0000359,9.03e-10,32;CL:0000393,3.96e-08,61;CL:0000211,3.96e-08,61;CL:0002139,5.89e-08,24;CL:0000071,7.44e-08,18;CL:0002546,7.44e-08,18;CL:0000115,2.13e-07,36;CL:0002620,2.47e-07,23;CL:0000680,3.50e-07,58;CL:0000056,3.50e-07,58;CL:0000355,3.50e-07,58;CL:0000187,4.04e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;8.02e-08;18 | |ontology_enrichment_development_v019=CL:0002546;8.02e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.67e-27!312;UBERON:0000483!2.38e-26!309;UBERON:0000025!2.77e-25!194;UBERON:0001017!1.05e-24!82;UBERON:0005743!1.66e-22!86;UBERON:0000955!5.38e-22!69;UBERON:0006238!5.38e-22!69;UBERON:0000073!1.33e-21!94;UBERON:0001016!1.33e-21!94;UBERON:0001049!2.22e-21!57;UBERON:0005068!2.22e-21!57;UBERON:0006241!2.22e-21!57;UBERON:0007135!2.22e-21!57;UBERON:0002616!9.23e-21!59;UBERON:0000475!1.04e-20!365;UBERON:0004111!2.06e-19!241;UBERON:0003075!8.98e-19!86;UBERON:0007284!8.98e-19!86;UBERON:0001869!1.10e-18!32;UBERON:0001893!1.26e-18!34;UBERON:0002780!1.94e-18!41;UBERON:0001890!1.94e-18!41;UBERON:0006240!1.94e-18!41;UBERON:0002020!2.55e-18!34;UBERON:0003528!2.55e-18!34;UBERON:0002791!6.15e-18!33;UBERON:0002049!1.66e-17!79;UBERON:0007798!1.66e-17!79;UBERON:0003080!2.11e-17!42;UBERON:0004121!7.23e-17!169;UBERON:0002346!1.32e-16!90;UBERON:0000477!1.74e-16!286;UBERON:0001981!3.04e-16!60;UBERON:0007500!3.04e-16!60;UBERON:0004537!3.04e-16!60;UBERON:0006965!3.04e-16!60;UBERON:0000055!5.56e-16!69;UBERON:0000033!1.37e-15!123;UBERON:0000924!1.64e-15!173;UBERON:0006601!1.64e-15!173;UBERON:0000956!2.57e-15!25;UBERON:0000203!2.57e-15!25;UBERON:0003056!3.16e-15!61;UBERON:0004872!5.57e-15!84;UBERON:0002619!8.46e-15!22;UBERON:0001637!1.70e-14!42;UBERON:0003509!1.70e-14!42;UBERON:0004572!1.70e-14!42;UBERON:0001950!1.16e-13!20;UBERON:0000153!1.28e-13!129;UBERON:0007811!1.28e-13!129;UBERON:0000467!8.79e-12!625;UBERON:0000480!1.49e-11!626;UBERON:0004535!1.52e-11!110;UBERON:0004573!4.87e-11!33;UBERON:0004571!4.87e-11!33;UBERON:0000468!5.45e-11!659;UBERON:0001009!7.54e-11!113;UBERON:0003914!3.50e-10!118;UBERON:0000486!6.33e-09!82;UBERON:0000064!2.25e-08!219;UBERON:0000947!2.85e-08!21;UBERON:0010191!2.85e-08!21;UBERON:0000914!4.57e-08!83;UBERON:0002329!4.57e-08!83;UBERON:0003077!4.57e-08!83;UBERON:0003059!4.57e-08!83;UBERON:0007282!4.57e-08!83;UBERON:0009618!4.57e-08!83;UBERON:0007285!4.57e-08!83;UBERON:0002199!5.69e-08!45;UBERON:0002416!5.69e-08!45;UBERON:0000487!6.70e-08!22;UBERON:0000481!7.41e-08!347;UBERON:0002097!8.43e-08!40;UBERON:0001986!9.58e-08!18;UBERON:0004638!9.58e-08!18;UBERON:0004852!9.58e-08!18;UBERON:0004290!1.32e-07!70;UBERON:0000922!5.03e-07!612;UBERON:0002050!5.80e-07!605;UBERON:0005423!5.80e-07!605;UBERON:0000923!6.13e-07!604;UBERON:0005291!6.13e-07!604;UBERON:0006598!6.13e-07!604;UBERON:0002532!6.13e-07!604;UBERON:0006914!6.21e-07!25 | |ontology_enrichment_uberon=UBERON:0000119!1.67e-27!312;UBERON:0000483!2.38e-26!309;UBERON:0000025!2.77e-25!194;UBERON:0001017!1.05e-24!82;UBERON:0005743!1.66e-22!86;UBERON:0000955!5.38e-22!69;UBERON:0006238!5.38e-22!69;UBERON:0000073!1.33e-21!94;UBERON:0001016!1.33e-21!94;UBERON:0001049!2.22e-21!57;UBERON:0005068!2.22e-21!57;UBERON:0006241!2.22e-21!57;UBERON:0007135!2.22e-21!57;UBERON:0002616!9.23e-21!59;UBERON:0000475!1.04e-20!365;UBERON:0004111!2.06e-19!241;UBERON:0003075!8.98e-19!86;UBERON:0007284!8.98e-19!86;UBERON:0001869!1.10e-18!32;UBERON:0001893!1.26e-18!34;UBERON:0002780!1.94e-18!41;UBERON:0001890!1.94e-18!41;UBERON:0006240!1.94e-18!41;UBERON:0002020!2.55e-18!34;UBERON:0003528!2.55e-18!34;UBERON:0002791!6.15e-18!33;UBERON:0002049!1.66e-17!79;UBERON:0007798!1.66e-17!79;UBERON:0003080!2.11e-17!42;UBERON:0004121!7.23e-17!169;UBERON:0002346!1.32e-16!90;UBERON:0000477!1.74e-16!286;UBERON:0001981!3.04e-16!60;UBERON:0007500!3.04e-16!60;UBERON:0004537!3.04e-16!60;UBERON:0006965!3.04e-16!60;UBERON:0000055!5.56e-16!69;UBERON:0000033!1.37e-15!123;UBERON:0000924!1.64e-15!173;UBERON:0006601!1.64e-15!173;UBERON:0000956!2.57e-15!25;UBERON:0000203!2.57e-15!25;UBERON:0003056!3.16e-15!61;UBERON:0004872!5.57e-15!84;UBERON:0002619!8.46e-15!22;UBERON:0001637!1.70e-14!42;UBERON:0003509!1.70e-14!42;UBERON:0004572!1.70e-14!42;UBERON:0001950!1.16e-13!20;UBERON:0000153!1.28e-13!129;UBERON:0007811!1.28e-13!129;UBERON:0000467!8.79e-12!625;UBERON:0000480!1.49e-11!626;UBERON:0004535!1.52e-11!110;UBERON:0004573!4.87e-11!33;UBERON:0004571!4.87e-11!33;UBERON:0000468!5.45e-11!659;UBERON:0001009!7.54e-11!113;UBERON:0003914!3.50e-10!118;UBERON:0000486!6.33e-09!82;UBERON:0000064!2.25e-08!219;UBERON:0000947!2.85e-08!21;UBERON:0010191!2.85e-08!21;UBERON:0000914!4.57e-08!83;UBERON:0002329!4.57e-08!83;UBERON:0003077!4.57e-08!83;UBERON:0003059!4.57e-08!83;UBERON:0007282!4.57e-08!83;UBERON:0009618!4.57e-08!83;UBERON:0007285!4.57e-08!83;UBERON:0002199!5.69e-08!45;UBERON:0002416!5.69e-08!45;UBERON:0000487!6.70e-08!22;UBERON:0000481!7.41e-08!347;UBERON:0002097!8.43e-08!40;UBERON:0001986!9.58e-08!18;UBERON:0004638!9.58e-08!18;UBERON:0004852!9.58e-08!18;UBERON:0004290!1.32e-07!70;UBERON:0000922!5.03e-07!612;UBERON:0002050!5.80e-07!605;UBERON:0005423!5.80e-07!605;UBERON:0000923!6.13e-07!604;UBERON:0005291!6.13e-07!604;UBERON:0006598!6.13e-07!604;UBERON:0002532!6.13e-07!604;UBERON:0006914!6.21e-07!25 | ||
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|phase1_expression=5.08699461957559,4.28201047781966,2.25527046553554,3.00219895059391,0.893922188854576,4.36169262050184,0,3.79031924056099,1.56711376919903,3.44027511102112,0,4.15038607047327,6.06664049925443,0.123766352960047,0,8.0679017574213,7.8350288643117,3.65155045193687,7.3189919818576,14.1589216788306,10.4040352534569,2.82109249330279,5.15224776835902,8.21246550437305,5.77496142136093,0.916960868975415,0.656804715599566,1.41679406364623,0,0,0.928896739896456,0.919421224478927,3.0120591877825,1.10926203050036,13.7116945027134,3.2698923472107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,2.9408389224012,0,0,0,4.7717156823066,0,4.44313640671119,3.32594096193846,3.42555664203192,9.8889202000773,1.45718115317017,1.11235332835329,0,0.174129737299267,0,0,0,0,11.9257444420023,6.881876760849,12.1499175562658,18.6551620834923,19.7164735018656,11.5549577614828,9.61376846069329,9.04458657092651,9.96145535522789,7.69857409358742,3.62546385398232,6.84244895146661,0.732186172644509,12.5005447317595,21.8738325928075,7.23327799101046,4.26605807989723,6.64407734851601,10.7321646226118,12.3404535743857,14.839341258363,0,0,3.48875241714027,6.46063537203914,12.2831596314642,3.44263870114369,9.17877186396204,4.25602058638028,2.24271040056923,14.9448594021587,6.90669135568048,3.11211035399766,2.96363478553314,11.6057951210556,4.38936540170301,4.60940739583999,1.40592859100278,1.24864030732128,7.41613368007784,0.747243402759005,9.0424563955699,9.55050371771976,9.69110566245515,0.408308342509787,4.79053837515895,0,0,0.989067717114227,6.37112953356618,2.87447256726495,3.03005005117319,7.50711119231785,3.60183350129438,3.07284334616587,2.75839016219118,0.45071417671979,5.21788042536097,16.5038464833753,2.13557388818567,9.96079935449941,24.9075609750054,7.4197821051676,8.50213782150576,6.88632368426882,29.3670818099803,10.6206335625707,9.59248342127635,5.98324341174946,2.42469085228218,20.9455659584802,8.86618464403234,7.96934783859292,9.08326009867495,5.18217629122586,4.01526433544605,0.609868530647977,0.530119073285941,0.69716365721711,1.24393266018445,1.7662459561294,1.45990943630332,3.12899064659632,1.92972281457866,8.28809528114883,2.78620756819187,1.44375896333917,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,2.21446636387394,11.2193419042757,1.2347220339942,0,0,0,0,0,0.122988438543114,6.6911446016425,7.90202054942104,2.24803506515239,2.71428225511403,3.24059558054854,0,1.03993478527958,14.4331342025273,3.24605133930215,4.3441216867254,1.73239737313289,0,1.71228737011138,0,0,0,0,0,2.81201501960331,3.52762469217605,3.54437743105966,1.61205340865127,1.16253575405585,2.68367875415648,0,0,0,0,0.37872730027914,5.71481048629521,10.3136874900735,2.34434894420094,8.55362230113526,4.11309970813294,0,10.5755780073314,18.950153254366,3.92364061949952,15.5477165940414,5.94649892485778,3.57656445851882,8.45302752556,1.59562869950922,0,8.74505072491283,4.25547396069835,12.7882645927728,0.714889968290738,0,3.29296134712308,3.90883421152482,0,0.791951872933429,6.33022691825131,0.871533458600294,5.49851451501314,0,0,0,3.35474797688216,1.14861935834114,8.5582143024431,2.31650090668127,1.64381058040307,2.86497541183833,0,0,0,0,9.90969034467607,24.7265722329481,11.5993321916654,15.0764638800914,8.93114252314428,0,0,0,0,1.00034104211935,0.542530047399471,3.53550464602372,2.49800584316026,0.946214490203608,3.63138386477411,2.10662269809403,2.27407504055985,1.03473071292505,7.3064815838898,6.0841825618762,3.82287903659565,1.37060810223918,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,13.8940372378515,11.6631099698927,10.9457436828899,5.76626171650654,10.7458522304008,11.7423362434833,4.45254199334973,11.2573076475939,8.34540108971697,7.47357119725663,10.3850885836724,9.18061989833678,0.362578348774867,12.6319076291069,2.4861867012692,0,0,0,3.15839729035188,3.54270550680308,6.27479815341484,2.92278449306521,4.74982330017941,4.54933536283586,10.7159034324205,6.90930931526846,6.16909010761157,4.6060894382455,2.00675909541941,1.52925763827023,0.831076008928724,5.59686886805446,0,0,0.256450125116389,0,0,0,0,0.247528499761764,9.76251414593493,4.55042172225565,14.4615536859744,1.64340221096607,1.54048617114644,2.6095624703442,3.30807773962873,2.68550612170684,3.0453505721988,4.60223788046945,3.56128142586949,4.95854746082934,2.49847087574638,11.4851441245126,2.2254711788221,7.43752878875657,30.8516099894027,11.1525963225696,7.08477234405004,6.91997839412128,10.4391959049009,6.67167188774112,4.15062171551775,1.48863347743867,1.89827654831236,1.14378116354295,1.535386747868,0.42793898803392,5.40945521474092,6.27958912159384,0.899362287916574,0.274537029736055,1.17812402345686,9.50257663394585,9.5106192703805,6.7401352998237,0,5.36169677188826,5.28250733783777,0.136499911407986,0.565621727814851,15.821136326834,4.4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| ||
|short_description=p@chr11:33397623..33397662,+ | |short_description=p@chr11:33397623..33397662,+ | ||
}} | }} |
Latest revision as of 21:38, 23 July 2015
Short description: | p@chr11:33397623..33397662, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:33397623..33397662, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.14e-11 | 76 |
embryonic cell | 2.23e-11 | 250 |
mesodermal cell | 3.10e-10 | 121 |
vascular associated smooth muscle cell | 9.03e-10 | 32 |
electrically responsive cell | 3.96e-08 | 61 |
electrically active cell | 3.96e-08 | 61 |
endothelial cell of vascular tree | 5.89e-08 | 24 |
blood vessel endothelial cell | 7.44e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.44e-08 | 18 |
endothelial cell | 2.13e-07 | 36 |
skin fibroblast | 2.47e-07 | 23 |
muscle precursor cell | 3.50e-07 | 58 |
myoblast | 3.50e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-07 | 58 |
muscle cell | 4.04e-07 | 55 |