FFCP PHASE1:Hg19::chr2:219246746..219246759,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:219246746..219246759,+
|short_description=p5@SLC11A1
|description=CAGE_peak_5_at_SLC11A1_5end
|association_with_transcript=0bp_to_ENST00000233202,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6556 | |EntrezGene=6556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10907 | |HGNC=10907 | ||
|TSSclassifier=strong | |||
|UniProt=P49279,Q59F11 | |UniProt=P49279,Q59F11 | ||
|association_with_transcript=0bp_to_ENST00000233202,ENST00000468221,NM_000578,uc002vhu.1,uc002vhv.2,uc002vhw.2,uc010fvp.1,uc010fvq.1,uc010zkb.1,uc010zkc.1_5end | |||
|cluster_id=chr2:219246746..219246759,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_5_at_SLC11A1_5end | |||
|id=chr2:219246746..219246759,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.36e-60!42;CL:0000766!3.50e-57!76;CL:0000860!5.34e-55!45;CL:0002194!1.63e-52!63;CL:0000576!1.63e-52!63;CL:0000040!1.63e-52!63;CL:0000559!1.63e-52!63;CL:0002009!2.36e-50!65;CL:0000839!1.71e-45!70;CL:0000557!1.33e-44!71;CL:0000763!2.33e-32!112;CL:0000049!2.33e-32!112;CL:0000738!1.50e-31!140;CL:0002087!1.96e-29!119;CL:0002031!4.88e-24!124;CL:0000037!9.97e-22!172;CL:0000566!9.97e-22!172;CL:0002032!1.04e-20!165;CL:0000837!1.04e-20!165;CL:0000988!2.07e-19!182;CL:0002393!1.54e-11!9;CL:0002397!1.54e-11!9;CL:0000094!3.49e-11!8;CL:0000081!1.23e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-71;33!CL:0002057;2.80e-71;33!CL:0000473;4.64e-66;39!CL:0000234;4.64e-66;39!CL:0000576;4.19e-49;48!CL:0000766;1.12e-38;69!CL:0000763;4.91e-17;100!CL:0000094;3.06e-13;8!CL:0002087;8.52e-12;104!CL:0000738;1.32e-10;136!CL:0000235;1.03e-09;6!CL:0000081;2.49e-09;11!CL:0002393;1.02e-08;6!CL:0002397;1.02e-08;6!CL:0000775;9.04e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.74e-95,48;CL:0000234,3.74e-95,48;CL:0000860,7.87e-87,42;CL:0002057,7.87e-87,42;CL:0000766,3.00e-82,72;CL:0002194,1.19e-76,59;CL:0000576,1.19e-76,59;CL:0000040,1.19e-76,59;CL:0000559,1.19e-76,59;CL:0002009,9.87e-74,61;CL:0000839,3.34e-67,66;CL:0000557,5.18e-66,67;CL:0000763,4.49e-50,108;CL:0000049,4.49e-50,108;CL:0000738,8.00e-42,136;CL:0002087,3.06e-38,115;CL:0002031,7.69e-33,120;CL:0000037,5.48e-31,168;CL:0002032,3.09e-30,161;CL:0000837,3.09e-30,161;CL:0000988,1.19e-28,177;CL:0000094,2.90e-13,8;CL:0002393,5.71e-11,9;CL:0002397,5.71e-11,9;CL:0000235,1.37e-09,6;CL:0000081,2.40e-09,11;CL:0000775,7.50e-08,3;CL:0000134,2.66e-07,354;CL:0002320,6.47e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.24e-62;42!CL:0000049;2.22e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-44!102;UBERON:0003061!1.67e-44!102;UBERON:0002193!5.91e-40!112;UBERON:0002371!1.31e-37!80;UBERON:0007023!8.12e-35!115;UBERON:0001474!9.05e-34!86;UBERON:0002405!2.01e-26!115;UBERON:0004765!3.23e-26!101;UBERON:0001434!3.23e-26!101;UBERON:0001049!6.26e-19!57;UBERON:0005068!6.26e-19!57;UBERON:0006241!6.26e-19!57;UBERON:0007135!6.26e-19!57;UBERON:0002616!3.65e-15!59;UBERON:0003081!7.40e-15!216;UBERON:0002780!2.54e-14!41;UBERON:0001890!2.54e-14!41;UBERON:0006240!2.54e-14!41;UBERON:0003080!8.18e-14!42;UBERON:0003075!2.22e-13!86;UBERON:0007284!2.22e-13!86;UBERON:0001017!2.11e-12!82;UBERON:0002346!2.62e-12!90;UBERON:0000955!2.71e-12!69;UBERON:0006238!2.71e-12!69;UBERON:0005743!3.64e-12!86;UBERON:0002308!6.43e-12!9;UBERON:0000125!6.43e-12!9;UBERON:0002020!1.13e-11!34;UBERON:0003528!1.13e-11!34;UBERON:0001893!3.44e-11!34;UBERON:0002791!1.42e-10!33;UBERON:0002204!2.50e-10!167;UBERON:0000073!4.49e-10!94;UBERON:0001016!4.49e-10!94;UBERON:0001869!1.38e-09!32;UBERON:0009663!1.70e-09!7;UBERON:0000062!1.94e-09!511;UBERON:0002420!6.97e-09!9;UBERON:0007245!6.97e-09!9;UBERON:0010009!6.97e-09!9;UBERON:0010011!6.97e-09!9;UBERON:0000454!6.97e-09!9;UBERON:0002298!3.01e-08!8;UBERON:0003056!3.37e-08!61;UBERON:0000178!2.31e-07!15;UBERON:0000179!2.31e-07!15;UBERON:0000463!2.31e-07!15;UBERON:0000467!6.27e-07!625;UBERON:0000480!7.21e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;7.29e-12;9!UBERON:0002308;7.29e-12;9!UBERON:0009663;2.66e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-56,76;UBERON:0002390,5.32e-56,98;UBERON:0003061,5.32e-56,98;UBERON:0001474,1.30e-51,82;UBERON:0002193,1.75e-49,108;UBERON:0004765,7.00e-46,90;UBERON:0002405,5.50e-44,93;UBERON:0001434,5.27e-40,100;UBERON:0003081,1.13e-20,203;UBERON:0002204,7.44e-19,167;UBERON:0001049,5.09e-12,56;UBERON:0005068,5.09e-12,56;UBERON:0006241,5.09e-12,56;UBERON:0007135,5.09e-12,56;UBERON:0000125,6.47e-12,9;UBERON:0002308,6.47e-12,9;UBERON:0000073,3.69e-10,53;UBERON:0002616,3.69e-10,53;UBERON:0007023,9.40e-09,114;UBERON:0000926,1.60e-08,315;UBERON:0004120,1.60e-08,315;UBERON:0006603,1.60e-08,315;UBERON:0009663,2.63e-08,7;UBERON:0003528,5.50e-08,34;UBERON:0002020,5.50e-08,34;UBERON:0000923,9.92e-08,560;UBERON:0010316,9.92e-08,560;UBERON:0005291,9.92e-08,560;UBERON:0006598,9.92e-08,560;UBERON:0010317,9.92e-08,560;UBERON:0002532,9.92e-08,560;UBERON:0002050,1.51e-07,564;UBERON:0003075,1.62e-07,82;UBERON:0007284,1.62e-07,82;UBERON:0002780,3.03e-07,41;UBERON:0001890,3.03e-07,41;UBERON:0003080,3.03e-07,41;UBERON:0006240,3.03e-07,41;UBERON:0002346,6.09e-07,86;UBERON:0002384,7.50e-07,371;UBERON:0000955,7.84e-07,68;UBERON:0006238,7.84e-07,68;UBERON:0005423,8.36e-07,581 | |||
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| ||
|short_description=p5@SLC11A1 | |||
}} | }} |
Latest revision as of 17:12, 24 September 2015
Short description: | p5@SLC11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC11A1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_ENST00000233202, ENST00000468221, NM_000578, uc002vhu.1, uc002vhv.2, uc002vhw.2, uc010fvp.1, uc010fvq.1, uc010zkb.1, uc010zkc.1_5end |
EntrezGene: | SLC11A1 |
HGNC: | 10907 |
UniProt: | P49279Q59F11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.74e-95 | 48 |
phagocyte | 3.74e-95 | 48 |
classical monocyte | 7.87e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.87e-87 | 42 |
myeloid leukocyte | 3.00e-82 | 72 |
monopoietic cell | 1.19e-76 | 59 |
monocyte | 1.19e-76 | 59 |
monoblast | 1.19e-76 | 59 |
promonocyte | 1.19e-76 | 59 |
macrophage dendritic cell progenitor | 9.87e-74 | 61 |
myeloid lineage restricted progenitor cell | 3.34e-67 | 66 |
granulocyte monocyte progenitor cell | 5.18e-66 | 67 |
myeloid cell | 4.49e-50 | 108 |
common myeloid progenitor | 4.49e-50 | 108 |
leukocyte | 8.00e-42 | 136 |
nongranular leukocyte | 3.06e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 7.69e-33 | 120 |
hematopoietic stem cell | 5.48e-31 | 168 |
hematopoietic oligopotent progenitor cell | 3.09e-30 | 161 |
hematopoietic multipotent progenitor cell | 3.09e-30 | 161 |
hematopoietic cell | 1.19e-28 | 177 |
granulocyte | 2.90e-13 | 8 |
intermediate monocyte | 5.71e-11 | 9 |
CD14-positive, CD16-positive monocyte | 5.71e-11 | 9 |
macrophage | 1.37e-09 | 6 |
blood cell | 2.40e-09 | 11 |
neutrophil | 7.50e-08 | 3 |
mesenchymal cell | 2.66e-07 | 354 |
connective tissue cell | 6.47e-07 | 361 |