FFCP PHASE1:Hg19::chr4:176733617..176733629,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:176733617..176733629,-
|short_description=p15@GPM6A
|description=CAGE_peak_15_at_GPM6A_5end
|association_with_transcript=-202bp_to_ENST00000505375_5end
|E...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2823 | |EntrezGene=2823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |HGNC=4460 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBH3 | |UniProt=D6RBH3 | ||
|association_with_transcript=-202bp_to_ENST00000505375_5end | |||
|cluster_id=chr4:176733617..176733629,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_15_at_GPM6A_5end | |||
|id=chr4:176733617..176733629,- | |||
|ontology_enrichment_celltype=CL:0000047!3.95e-09!8;CL:0002605!1.48e-08!3;CL:0002319!1.54e-08!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.78e-15;3!UBERON:0006601;4.54e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.71e-108!57;UBERON:0005068!4.71e-108!57;UBERON:0006241!4.71e-108!57;UBERON:0007135!4.71e-108!57;UBERON:0001017!1.66e-107!82;UBERON:0005743!1.18e-105!86;UBERON:0000073!6.33e-98!94;UBERON:0001016!6.33e-98!94;UBERON:0002616!6.41e-91!59;UBERON:0000955!3.32e-90!69;UBERON:0006238!3.32e-90!69;UBERON:0002780!1.96e-85!41;UBERON:0001890!1.96e-85!41;UBERON:0006240!1.96e-85!41;UBERON:0003080!3.27e-83!42;UBERON:0001893!1.53e-82!34;UBERON:0002020!2.08e-82!34;UBERON:0003528!2.08e-82!34;UBERON:0002791!1.21e-79!33;UBERON:0001869!9.19e-78!32;UBERON:0003075!3.47e-74!86;UBERON:0007284!3.47e-74!86;UBERON:0002346!2.29e-70!90;UBERON:0000956!2.08e-69!25;UBERON:0000203!2.08e-69!25;UBERON:0002619!2.39e-62!22;UBERON:0003056!9.78e-58!61;UBERON:0001950!2.22e-56!20;UBERON:0000033!2.48e-50!123;UBERON:0004121!3.66e-49!169;UBERON:0000924!9.94e-48!173;UBERON:0006601!9.94e-48!173;UBERON:0000153!1.94e-47!129;UBERON:0007811!1.94e-47!129;UBERON:0007023!2.58e-46!115;UBERON:0000025!8.64e-25!194;UBERON:0003076!1.72e-24!15;UBERON:0003057!1.72e-24!15;UBERON:0001871!2.92e-19!7;UBERON:0000200!4.56e-19!6;UBERON:0004111!1.32e-17!241;UBERON:0004733!1.52e-17!12;UBERON:0002028!1.52e-17!12;UBERON:0007277!1.52e-17!12;UBERON:0000349!2.24e-16!5;UBERON:0004732!4.60e-16!13;UBERON:0001872!5.45e-16!5;UBERON:0002298!7.14e-16!8;UBERON:0002021!7.38e-16!5;UBERON:0002420!8.54e-16!9;UBERON:0007245!8.54e-16!9;UBERON:0010009!8.54e-16!9;UBERON:0010011!8.54e-16!9;UBERON:0000454!8.54e-16!9;UBERON:0002308!6.18e-15!9;UBERON:0000125!6.18e-15!9;UBERON:0000477!7.02e-14!286;UBERON:0000064!1.77e-13!219;UBERON:0000483!1.17e-12!309;UBERON:0000119!2.02e-12!312;UBERON:0000475!1.27e-11!365;UBERON:0002680!4.10e-11!9;UBERON:0001895!4.10e-11!9;UBERON:0010092!4.10e-11!9;UBERON:0002771!1.23e-10!3;UBERON:0009663!2.55e-10!7;UBERON:0000988!4.70e-09!3;UBERON:0002240!5.12e-09!3;UBERON:0006331!6.98e-09!3;UBERON:0001896!1.16e-08!3;UBERON:0005290!1.16e-08!3;UBERON:0010096!1.16e-08!3;UBERON:0001876!8.88e-08!2;UBERON:0001954!1.52e-07!2;UBERON:0003022!1.52e-07!2;UBERON:0002421!1.52e-07!2;UBERON:0002600!1.52e-07!2;UBERON:0000369!1.55e-07!4;UBERON:0002435!1.55e-07!4;UBERON:0000204!1.55e-07!4;UBERON:0010082!1.55e-07!4;UBERON:0001870!2.35e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.21e-106;22!UBERON:0001950;2.61e-96;20!UBERON:0000956;9.00e-94;25!UBERON:0000203;9.00e-94;25!UBERON:0001869;2.60e-90;32!UBERON:0002791;4.10e-84;32!UBERON:0001893;1.52e-82;34!UBERON:0003528;3.02e-77;34!UBERON:0002020;3.02e-77;34!UBERON:0002780;3.38e-56;41!UBERON:0001890;3.38e-56;41!UBERON:0000073;1.09e-42;53!UBERON:0002616;1.09e-42;53!UBERON:0000200;2.26e-31;6!UBERON:0000955;2.39e-27;68!UBERON:0001871;2.45e-27;6!UBERON:0001017;3.81e-27;75!UBERON:0000349;5.78e-27;5!UBERON:0001872;3.04e-26;5!UBERON:0002021;3.94e-26;5!UBERON:0001016;1.38e-23;83!UBERON:0001870;1.69e-16;3!UBERON:0002420;1.43e-14;9!UBERON:0007245;1.43e-14;9!UBERON:0010009;1.43e-14;9!UBERON:0010011;1.43e-14;9!UBERON:0000454;1.43e-14;9!UBERON:0001876;3.73e-12;2!UBERON:0000369;3.83e-12;4!UBERON:0002435;3.83e-12;4!UBERON:0000204;3.83e-12;4!UBERON:0002771;4.04e-12;2!UBERON:0001954;7.72e-12;2!UBERON:0003022;7.72e-12;2!UBERON:0002421;7.72e-12;2!UBERON:0002600;7.72e-12;2!UBERON:0002702;1.54e-11;2!UBERON:0011216;1.41e-10;132!UBERON:0007023;2.56e-10;114!UBERON:0002037;6.77e-08;6!UBERON:0005383;8.77e-08;3!UBERON:0005382;8.77e-08;3!UBERON:0010314;3.33e-07;132!UBERON:0009663;3.92e-07;7!UBERON:0003112;7.77e-07;1!UBERON:0011158;7.77e-07;1!UBERON:0003128;7.77e-07;1!UBERON:0001703;7.77e-07;1!UBERON:0002241;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.74e-107,22;UBERON:0001869,2.21e-102,32;UBERON:0001950,2.05e-96,20;UBERON:0001893,3.27e-96,34;UBERON:0002791,1.76e-94,32;UBERON:0000956,7.41e-94,25;UBERON:0000203,7.41e-94,25;UBERON:0003528,9.02e-89,34;UBERON:0002020,9.02e-89,34;UBERON:0002780,3.07e-79,41;UBERON:0001890,3.07e-79,41;UBERON:0003080,3.07e-79,41;UBERON:0006240,3.07e-79,41;UBERON:0001049,2.65e-76,56;UBERON:0005068,2.65e-76,56;UBERON:0006241,2.65e-76,56;UBERON:0007135,2.65e-76,56;UBERON:0000073,1.68e-75,53;UBERON:0002616,1.68e-75,53;UBERON:0001017,3.35e-70,81;UBERON:0001016,1.10e-62,89;UBERON:0000955,3.44e-61,68;UBERON:0006238,3.44e-61,68;UBERON:0003056,7.51e-52,61;UBERON:0003075,1.85e-50,82;UBERON:0007284,1.85e-50,82;UBERON:0002346,7.50e-48,86;UBERON:0010371,1.42e-38,104;UBERON:0007023,1.68e-32,114;UBERON:0000200,1.27e-31,6;UBERON:0010314,1.77e-31,132;UBERON:0004121,5.61e-30,171;UBERON:0000924,5.61e-30,171;UBERON:0006601,5.61e-30,171;UBERON:0001871,2.51e-27,6;UBERON:0000349,5.49e-27,5;UBERON:0001872,2.53e-26,5;UBERON:0002021,4.27e-26,5;UBERON:0011216,1.25e-24,223;UBERON:0000025,4.19e-18,192;UBERON:0001870,1.52e-16,3;UBERON:0002420,1.50e-14,9;UBERON:0007245,1.50e-14,9;UBERON:0010009,1.50e-14,9;UBERON:0010011,1.50e-14,9;UBERON:0000454,1.50e-14,9;UBERON:0004111,3.11e-13,240;UBERON:0001876,3.17e-12,2;UBERON:0002771,4.39e-12,2;UBERON:0000369,4.56e-12,4;UBERON:0002435,4.56e-12,4;UBERON:0000204,4.56e-12,4;UBERON:0010082,4.56e-12,4;UBERON:0001954,7.93e-12,2;UBERON:0003022,7.93e-12,2;UBERON:0002421,7.93e-12,2;UBERON:0002600,7.93e-12,2;UBERON:0002702,1.21e-11,2;UBERON:0000483,4.99e-09,306;UBERON:0000119,7.03e-09,309;UBERON:0002037,5.50e-08,6;UBERON:0006215,5.50e-08,6;UBERON:0005383,9.72e-08,3;UBERON:0005382,9.72e-08,3;UBERON:0009663,4.32e-07,7;UBERON:0003112,7.77e-07,1;UBERON:0011158,7.77e-07,1;UBERON:0003128,7.77e-07,1;UBERON:0001703,7.77e-07,1;UBERON:0002241,7.77e-07,1;UBERON:0004761,7.77e-07,1;UBERON:0009617,7.77e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0.773288812777695,1.34013012267479,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96488588659779,9.98752856514641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.71072392647405,0,0,0,0,0,0,0,0,0,1.04174996959975,0,2.29133233388275,1.52581736317083,1.87984741883082,1.77328571372128,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,3.10222900183806,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,5.0395260261283,0,0,0,0,0,3.82722206945555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,7.44360215901975,4.38168257472749,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0.127894371303652,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,2.24802287837608,7.08482881627925,3.51194489925733,3.48697819209284,2.26864526599546,1.59061680667701,5.16722066021924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,5.46754669029693,5.1671699125296,2.28296916698065,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.611727596791485,2.95977481032821,0,0,0,2.04250266890802,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,2.03974470572744,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0.773288812777695,1.34013012267479,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96488588659779,9.98752856514641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.71072392647405,0,0,0,0,0,0,0,0,0,1.04174996959975,0,2.29133233388275,1.52581736317083,1.87984741883082,1.77328571372128,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,3.10222900183806,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,5.0395260261283,0,0,0,0,0,3.82722206945555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,7.44360215901975,4.38168257472749,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0.127894371303652,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,2.24802287837608,7.08482881627925,3.51194489925733,3.48697819209284,2.26864526599546,1.59061680667701,5.16722066021924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,5.46754669029693,5.1671699125296,2.28296916698065,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.611727596791485,2.95977481032821,0,0,0,2.04250266890802,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,2.03974470572744,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@GPM6A | |||
}} | }} |
Latest revision as of 21:49, 16 September 2015
Short description: | p15@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GPM6A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -202bp_to_ENST00000505375_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | D6RBH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data