FFCP PHASE1:Hg19::chr6:89827665..89827718,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:89827665..89827718,-
|short_description=p2@SRSF12
|description=CAGE_peak_2_at_SRSF12_5end
|association_with_transcript=0bp_to_ENST00000517387_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=135295 | |EntrezGene=135295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21220 | |HGNC=21220 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFT0 | |UniProt=E5RFT0 | ||
|association_with_transcript=0bp_to_ENST00000517387_5end | |||
|cluster_id=chr6:89827665..89827718,- | |||
|description=CAGE_peak_2_at_SRSF12_5end | |||
|id=chr6:89827665..89827718,- | |||
|ontology_enrichment_celltype=CL:0002319!1.77e-09!25;CL:0000133!1.45e-08!59;CL:0000047!3.54e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.02e-10;25!CL:0000333;5.64e-09;5!CL:0002321;1.28e-08;15!CL:0002322;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.09e-11,25;CL:0000133,7.66e-11,59;CL:0000047,1.68e-09,8;CL:0000221,1.18e-07,72;CL:0002322,5.22e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-10;82!CL:0000133;8.83e-07;59 | |||
|ontology_enrichment_disease=DOID:171!2.39e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.27e-12;10!DOID:3095;4.74e-11;22!DOID:2994;4.74e-11;22!DOID:169;2.37e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.60e-12,10;DOID:3095,5.67e-11,22;DOID:2994,5.67e-11,22;DOID:169,2.76e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.90e-38!94;UBERON:0001016!2.90e-38!94;UBERON:0005743!2.17e-37!86;UBERON:0001017!6.70e-36!82;UBERON:0002346!9.78e-32!90;UBERON:0001049!1.93e-29!57;UBERON:0005068!1.93e-29!57;UBERON:0006241!1.93e-29!57;UBERON:0007135!1.93e-29!57;UBERON:0003075!7.16e-29!86;UBERON:0007284!7.16e-29!86;UBERON:0000955!2.16e-27!69;UBERON:0006238!2.16e-27!69;UBERON:0000924!2.15e-26!173;UBERON:0006601!2.15e-26!173;UBERON:0002780!3.22e-25!41;UBERON:0001890!3.22e-25!41;UBERON:0006240!3.22e-25!41;UBERON:0003056!2.13e-24!61;UBERON:0003080!3.43e-24!42;UBERON:0004121!4.69e-24!169;UBERON:0002616!1.21e-23!59;UBERON:0002020!2.01e-21!34;UBERON:0003528!2.01e-21!34;UBERON:0001893!3.99e-21!34;UBERON:0002791!1.83e-20!33;UBERON:0001869!1.88e-20!32;UBERON:0007023!1.89e-20!115;UBERON:0000033!6.12e-20!123;UBERON:0000153!2.36e-19!129;UBERON:0007811!2.36e-19!129;UBERON:0000956!3.71e-16!25;UBERON:0000203!3.71e-16!25;UBERON:0000922!1.26e-15!612;UBERON:0002619!6.38e-14!22;UBERON:0002050!7.25e-13!605;UBERON:0005423!7.25e-13!605;UBERON:0001950!1.50e-12!20;UBERON:0000923!2.01e-12!604;UBERON:0005291!2.01e-12!604;UBERON:0006598!2.01e-12!604;UBERON:0002532!2.01e-12!604;UBERON:0000481!1.66e-11!347;UBERON:0000475!1.67e-11!365;UBERON:0000119!2.01e-11!312;UBERON:0000062!2.07e-11!511;UBERON:0000483!3.31e-11!309;UBERON:0000468!5.40e-11!659;UBERON:0000064!3.26e-10!219;UBERON:0000025!5.32e-10!194;UBERON:0000489!1.88e-08!32;UBERON:0000467!3.65e-08!625;UBERON:0000480!4.78e-08!626;UBERON:0004111!1.96e-07!241;UBERON:0002420!5.76e-07!9;UBERON:0007245!5.76e-07!9;UBERON:0010009!5.76e-07!9;UBERON:0010011!5.76e-07!9;UBERON:0000454!5.76e-07!9;UBERON:0002417!6.08e-07!61;UBERON:0000916!6.08e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.77e-29;32!UBERON:0003528;3.72e-28;34!UBERON:0002020;3.72e-28;34!UBERON:0002791;9.97e-28;32!UBERON:0000956;1.75e-26;25!UBERON:0000203;1.75e-26;25!UBERON:0001893;3.06e-26;34!UBERON:0002780;1.04e-24;41!UBERON:0001890;1.04e-24;41!UBERON:0002619;1.59e-22;22!UBERON:0000073;2.65e-22;53!UBERON:0002616;2.65e-22;53!UBERON:0001950;3.70e-20;20!UBERON:0001016;2.33e-17;83!UBERON:0001017;1.17e-16;75!UBERON:0000955;2.44e-16;68!UBERON:0000922;4.66e-09;49!UBERON:0000013;5.64e-09;5!UBERON:0002410;5.64e-09;5!UBERON:0000200;1.35e-08;6!UBERON:0002050;1.94e-08;5!UBERON:0005423;1.94e-08;5!UBERON:0000349;3.88e-08;5!UBERON:0001871;8.26e-08;6!UBERON:0002420;8.89e-08;9!UBERON:0007245;8.89e-08;9!UBERON:0010009;8.89e-08;9!UBERON:0010011;8.89e-08;9!UBERON:0000454;8.89e-08;9!UBERON:0000489;1.70e-07;29!UBERON:0000125;2.18e-07;9!UBERON:0002308;2.18e-07;9!UBERON:0002113;4.17e-07;24!UBERON:0011143;4.17e-07;24!UBERON:0002346;5.59e-07;4!UBERON:0000923;5.59e-07;4!UBERON:0010316;5.59e-07;4!UBERON:0005291;5.59e-07;4!UBERON:0001894;5.63e-07;7!UBERON:0000369;9.25e-07;4!UBERON:0002435;9.25e-07;4!UBERON:0000204;9.25e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.17e-50,89;UBERON:0001017,2.30e-46,81;UBERON:0001049,1.02e-39,56;UBERON:0005068,1.02e-39,56;UBERON:0006241,1.02e-39,56;UBERON:0007135,1.02e-39,56;UBERON:0000073,2.57e-38,53;UBERON:0002616,2.57e-38,53;UBERON:0002780,6.88e-36,41;UBERON:0001890,6.88e-36,41;UBERON:0003080,6.88e-36,41;UBERON:0006240,6.88e-36,41;UBERON:0002346,2.02e-35,86;UBERON:0000955,6.58e-35,68;UBERON:0006238,6.58e-35,68;UBERON:0001869,9.70e-33,32;UBERON:0003528,1.07e-32,34;UBERON:0002020,1.07e-32,34;UBERON:0003075,5.80e-31,82;UBERON:0007284,5.80e-31,82;UBERON:0002791,2.65e-30,32;UBERON:0001893,2.70e-30,34;UBERON:0003056,1.43e-29,61;UBERON:0004121,1.53e-29,171;UBERON:0000924,1.53e-29,171;UBERON:0006601,1.53e-29,171;UBERON:0000956,7.03e-27,25;UBERON:0000203,7.03e-27,25;UBERON:0010371,1.23e-23,104;UBERON:0002619,7.26e-23,22;UBERON:0001950,2.08e-20,20;UBERON:0010314,2.26e-18,132;UBERON:0011216,4.81e-18,223;UBERON:0007023,1.29e-11,114;UBERON:0000025,3.86e-11,192;UBERON:0000013,6.80e-09,5;UBERON:0002410,6.80e-09,5;UBERON:0000200,1.08e-08,6;UBERON:0000922,1.10e-08,592;UBERON:0000349,2.72e-08,5;UBERON:0001871,7.18e-08,6;UBERON:0002420,9.23e-08,9;UBERON:0007245,9.23e-08,9;UBERON:0010009,9.23e-08,9;UBERON:0010011,9.23e-08,9;UBERON:0000454,9.23e-08,9;UBERON:0000125,2.08e-07,9;UBERON:0002308,2.08e-07,9;UBERON:0001894,6.08e-07,7;UBERON:0006222,6.08e-07,7;UBERON:0000489,7.06e-07,31;UBERON:0004111,7.99e-07,240;UBERON:0000369,8.58e-07,4;UBERON:0002435,8.58e-07,4;UBERON:0000204,8.58e-07,4;UBERON:0010082,8.58e-07,4;UBERON:0005423,9.02e-07,581 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,1.35433163884467,0,0.626909442956176,3.72106783270374,3.28498620174922,3.76627918784408,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.422510572623884,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,1.41802225746102,1.33037638477538,2.19586964232815,2.94702919869853,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,1.24484414159907,0.269421344139376,0.326923806226917,0,0,0.234321431833797,0,0,0,0.117434498643765,0.485618833104395,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.95157929807353,1.59035721985782,3.137236457477,2.38420426535352,2.27088765788066,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0.201057944823262,0.185176890317059,0.651616610620649,0,0,3.24605133930215,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.571652865261156,0,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,4.57370323600434,15.6167824629146,5.41302168944387,5.19300422536481,8.93114252314428,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.907170879989041,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.262248829918848,2.25599806453706,3.92778219232515,0,0,3.69430701125065,1.13733384070897,0,0.431831832204279,0,0.541892875087706,0.501689773854853,1.27438136522519,3.3243040357149,1.34324852833307,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,2.38080608527693,1.98022799809411,0,0,0,0,0.154048617114644,0.460511024178389,0.275673144969061,0.322260734604821,0,0.681813019328807,0.445160178233687,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,2.67060177818683,1.92495971052672,0,0,0,0.142283686696828,0.478278818186467,0,0,0,0,1.12318871245384,0,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0,0,0,1.23087398947712,0,0,0,0,0,0.849523652246594,0,0,0,0,0.307160702099232,3.97659059106519,4.22008249231538,0,0,9.92289418201569,0.19924798825107,0.276283915531148,6.55025144421118,1.53403023753232,0,0,0,0,0,0.591860433821602,0,0,0.969332746095218,3.6179558283122,3.99227596002388,0,0,0,0,0,0,2.41320361269025,0.874813840149763,9.72299971626437,3.54296554325536,2.89431452700979,0,0.884634079449797,1.77328571372128,3.51016635446356,0,0.139423744278603,0.538651809526579,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,5.27495161320068,0.652931232636591,0.706765357169704,0.216388639742091,0,0,0.611030144933625,0,0,0,0.808813595768125,0,3.51396668588009,0,0.391329237864179,0,0,0,7.65181904076225,1.01098527405581,2.55549813004637,4.25121584728713,0,0,0,0,5.12297182853627,0,1.21491816834592,0,0,0.52418000472609,0,0,0.0730893170861856,0,0.290967049465258,0.794305140223502,2.25980740780532,0,0,3.79864775735272,0.195551382734803,0.320635281006135,0.426905989478705,0.599428828746391,0.144090417154106,1.94712213482057,3.08870996151536,0,0.49701014226173,0,0.271808412147228,0.209205692624666,0,0.577901179803038,0.600420288709789,1.09524303113594,0,0,0,0,0,0,0.599037001496973,0,0,1.00775208730089,0,2.32991899054908,0.551482276150566,0.659326867049332,1.28066733322951,1.08270229666224,0,6.36183751847443,1.90684768556206,1.44677833618517,1.65047323916681,0.83088067605837,0,0,3.76647251279753,0,0.315222829196793,2.41291105420991,0.211200673038813,0.179287339332845,0,0.714695326373367,0.662091970365432,0.76280561296425,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,2.45637617086946,2.90911723833918,0.342173675768659,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0.628216385000937,4.43034089983493,3.66078794705889,3.1297732676625,3.44045517414043,0.998361463831671,1.17983165588629,2.62862406378839,0.124980407962107,0.151649117541648,0,0,3.27834434064817,2.60857851499485,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,1.07220795687463,3.39292579554775,0.680117776536817,0.231522474323834,0,0,2.16161013012681,0.219284049578707,0,0,0.168942440653073,0,0,0.3038599561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| ||
|short_description=p2@SRSF12 | |||
}} | }} |
Latest revision as of 03:15, 20 September 2015
Short description: | p2@SRSF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRSF12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517387_5end |
EntrezGene: | SRSF12 |
HGNC: | 21220 |
UniProt: | E5RFT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.09e-11 | 25 |
neurectodermal cell | 7.66e-11 | 59 |
neuronal stem cell | 1.68e-09 | 8 |
ectodermal cell | 1.18e-07 | 72 |
embryonic stem cell | 5.22e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.60e-12 | 10 |
germ cell and embryonal cancer | 5.67e-11 | 22 |
germ cell cancer | 5.67e-11 | 22 |
neuroendocrine tumor | 2.76e-07 | 6 |