FFCP PHASE1:Hg19::chr7:155437341..155437405,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:155437341..155437405,+
|short_description=p1@RBM33
|description=CAGE_peak_1_at_RBM33_5end
|association_with_transcript=0bp_to_ENST00000392759,ENST000004018...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=155435 | |EntrezGene=155435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27223 | |HGNC=27223 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTF7,Q96EV2 | |UniProt=A8MTF7,Q96EV2 | ||
|association_with_transcript=0bp_to_ENST00000392759,ENST00000401878_5end | |||
|cluster_id=chr7:155437341..155437405,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_RBM33_5end | |||
|id=chr7:155437341..155437405,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.97e-35!172;CL:0000566!2.97e-35!172;CL:0000738!7.64e-35!140;CL:0002032!7.28e-32!165;CL:0000837!7.28e-32!165;CL:0000988!1.24e-31!182;CL:0002031!3.00e-26!124;CL:0002087!4.87e-25!119;CL:0000763!5.29e-18!112;CL:0000049!5.29e-18!112;CL:0000766!1.96e-16!76;CL:0002057!4.20e-14!42;CL:0000860!1.39e-13!45;CL:0000557!1.47e-13!71;CL:0000542!3.36e-13!53;CL:0000051!3.36e-13!53;CL:0000838!6.54e-13!52;CL:0000839!8.86e-13!70;CL:0002009!2.14e-11!65;CL:0002194!1.03e-10!63;CL:0000576!1.03e-10!63;CL:0000040!1.03e-10!63;CL:0000559!1.03e-10!63;CL:0000791!1.49e-09!18;CL:0000789!1.49e-09!18;CL:0002420!1.49e-09!18;CL:0002419!1.49e-09!18;CL:0000790!1.49e-09!18;CL:0000084!2.23e-08!25;CL:0000827!2.23e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.54e-11;33!CL:0002057;3.54e-11;33!CL:0000791;1.58e-09;18!CL:0000789;1.58e-09;18!CL:0002419;1.58e-09;18!CL:0000576;3.60e-09;48!CL:0002087;7.55e-09;104!CL:0000084;2.30e-08;25!CL:0000542;3.87e-08;53!CL:0000766;4.04e-08;69!CL:0000473;1.18e-07;39!CL:0000234;1.18e-07;39!CL:0000738;1.37e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.07e-35,168;CL:0000738,1.87e-35,136;CL:0000988,1.46e-32,177;CL:0002032,2.77e-32,161;CL:0000837,2.77e-32,161;CL:0002031,9.08e-27,120;CL:0002087,1.47e-25,115;CL:0000763,2.23e-18,108;CL:0000049,2.23e-18,108;CL:0000766,5.23e-17,72;CL:0000860,4.20e-14,42;CL:0002057,4.20e-14,42;CL:0000557,4.72e-14,67;CL:0000839,3.04e-13,66;CL:0000542,3.36e-13,53;CL:0000051,3.36e-13,53;CL:0000838,6.54e-13,52;CL:0002009,7.75e-12,61;CL:0000473,1.26e-11,48;CL:0000234,1.26e-11,48;CL:0002194,3.89e-11,59;CL:0000576,3.89e-11,59;CL:0000040,3.89e-11,59;CL:0000559,3.89e-11,59;CL:0000791,1.49e-09,18;CL:0000789,1.49e-09,18;CL:0002420,1.49e-09,18;CL:0002419,1.49e-09,18;CL:0000790,1.49e-09,18;CL:0000084,2.23e-08,25;CL:0000827,2.23e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-10;42!CL:0000790;1.58e-09;18!CL:0000051;3.87e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-23!115;UBERON:0002390!4.43e-18!102;UBERON:0003061!4.43e-18!102;UBERON:0002193!4.30e-16!112;UBERON:0001049!4.46e-13!57;UBERON:0005068!4.46e-13!57;UBERON:0006241!4.46e-13!57;UBERON:0007135!4.46e-13!57;UBERON:0002371!2.78e-11!80;UBERON:0002780!3.31e-11!41;UBERON:0001890!3.31e-11!41;UBERON:0006240!3.31e-11!41;UBERON:0003080!3.89e-11!42;UBERON:0001474!1.65e-10!86;UBERON:0001893!1.54e-09!34;UBERON:0002405!1.89e-09!115;UBERON:0002020!2.00e-09!34;UBERON:0003528!2.00e-09!34;UBERON:0002791!2.37e-09!33;UBERON:0000955!2.63e-09!69;UBERON:0006238!2.63e-09!69;UBERON:0002616!2.68e-09!59;UBERON:0001869!1.07e-08!32;UBERON:0001017!1.13e-08!82;UBERON:0000073!7.07e-08!94;UBERON:0001016!7.07e-08!94;UBERON:0005743!1.04e-07!86;UBERON:0002619!1.26e-07!22;UBERON:0002346!1.86e-07!90;UBERON:0001950!2.71e-07!20;UBERON:0003075!5.76e-07!86;UBERON:0007284!5.76e-07!86;UBERON:0000178!5.86e-07!15;UBERON:0000179!5.86e-07!15;UBERON:0000463!5.86e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0001893;3.52e-08;34!UBERON:0002791;3.82e-08;32!UBERON:0003528;4.70e-08;34!UBERON:0002020;4.70e-08;34!UBERON:0001869;6.77e-08;32!UBERON:0000073;1.08e-07;53!UBERON:0002616;1.08e-07;53!UBERON:0002619;1.19e-07;22!UBERON:0001950;2.56e-07;20!UBERON:0000178;5.78e-07;15!UBERON:0000179;5.78e-07;15!UBERON:0000463;5.78e-07;15!UBERON:0007023;7.17e-07;114 | |||
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| ||
|short_description=p1@RBM33 | |||
}} | }} |
Latest revision as of 10:06, 17 September 2015
Short description: | p1@RBM33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM33_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000392759, ENST00000401878_5end |
EntrezGene: | RBM33 |
HGNC: | 27223 |
UniProt: | A8MTF7Q96EV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.89e-22 | 114 |
hematopoietic system | 1.63e-18 | 98 |
blood island | 1.63e-18 | 98 |
hemolymphoid system | 2.04e-16 | 108 |
neural tube | 3.97e-13 | 56 |
neural rod | 3.97e-13 | 56 |
future spinal cord | 3.97e-13 | 56 |
neural keel | 3.97e-13 | 56 |
regional part of nervous system | 3.69e-12 | 53 |
regional part of brain | 3.69e-12 | 53 |
bone marrow | 1.31e-11 | 76 |
immune system | 1.54e-11 | 93 |
regional part of forebrain | 3.31e-11 | 41 |
forebrain | 3.31e-11 | 41 |
anterior neural tube | 3.31e-11 | 41 |
future forebrain | 3.31e-11 | 41 |
bone element | 8.93e-11 | 82 |
telencephalon | 1.54e-09 | 34 |
brain grey matter | 2.00e-09 | 34 |
gray matter | 2.00e-09 | 34 |
brain | 2.63e-09 | 68 |
future brain | 2.63e-09 | 68 |
regional part of telencephalon | 6.13e-09 | 32 |
nervous system | 8.89e-09 | 89 |
cerebral hemisphere | 1.07e-08 | 32 |
central nervous system | 1.16e-08 | 81 |
regional part of cerebral cortex | 1.26e-07 | 22 |
skeletal element | 1.32e-07 | 90 |
neurectoderm | 1.37e-07 | 86 |
neocortex | 2.71e-07 | 20 |
neural plate | 4.29e-07 | 82 |
presumptive neural plate | 4.29e-07 | 82 |
blood | 5.86e-07 | 15 |
haemolymphatic fluid | 5.86e-07 | 15 |
organism substance | 5.86e-07 | 15 |