FFCP PHASE1:Hg19::chr10:13043705..13043720,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23813 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BQI4 | |||
|association_with_transcript=-1bp_to_NM_031455,uc001ilq.1_5end | |||
|cluster_id=chr10:13043705..13043720,- | |||
|description=CAGE_peak_1_at_CCDC3_5end | |||
|id=chr10:13043705..13043720,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.43e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-39!115;UBERON:0001017!4.75e-27!82;UBERON:0005743!5.17e-26!86;UBERON:0000073!8.19e-26!94;UBERON:0001016!8.19e-26!94;UBERON:0000955!8.88e-24!69;UBERON:0006238!8.88e-24!69;UBERON:0002616!1.97e-22!59;UBERON:0001049!7.23e-21!57;UBERON:0005068!7.23e-21!57;UBERON:0006241!7.23e-21!57;UBERON:0007135!7.23e-21!57;UBERON:0000924!6.93e-20!173;UBERON:0006601!6.93e-20!173;UBERON:0004121!9.28e-20!169;UBERON:0000153!6.23e-19!129;UBERON:0007811!6.23e-19!129;UBERON:0000033!4.95e-18!123;UBERON:0003080!6.43e-17!42;UBERON:0003075!1.37e-16!86;UBERON:0007284!1.37e-16!86;UBERON:0002346!1.58e-16!90;UBERON:0002780!3.10e-16!41;UBERON:0001890!3.10e-16!41;UBERON:0006240!3.10e-16!41;UBERON:0001893!8.83e-15!34;UBERON:0002020!1.66e-14!34;UBERON:0003528!1.66e-14!34;UBERON:0001869!2.55e-14!32;UBERON:0000468!2.60e-14!659;UBERON:0002791!3.05e-14!33;UBERON:0000481!5.03e-14!347;UBERON:0000475!1.12e-13!365;UBERON:0000922!1.13e-13!612;UBERON:0002050!1.35e-12!605;UBERON:0005423!1.35e-12!605;UBERON:0000119!2.38e-12!312;UBERON:0000477!2.97e-12!286;UBERON:0000923!3.00e-12!604;UBERON:0005291!3.00e-12!604;UBERON:0006598!3.00e-12!604;UBERON:0002532!3.00e-12!604;UBERON:0000956!4.32e-12!25;UBERON:0000203!4.32e-12!25;UBERON:0000064!7.89e-12!219;UBERON:0000483!1.50e-11!309;UBERON:0003056!1.67e-11!61;UBERON:0002619!1.90e-11!22;UBERON:0000480!3.45e-11!626;UBERON:0000467!4.95e-11!625;UBERON:0001950!6.69e-11!20;UBERON:0000062!5.64e-10!511;UBERON:0004111!2.51e-09!241;UBERON:0000025!7.07e-08!194;UBERON:0004119!7.80e-07!169;UBERON:0000925!7.80e-07!169;UBERON:0006595!7.80e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.04e-16;32!UBERON:0001893;1.02e-15;34!UBERON:0002791;1.56e-15;32!UBERON:0003528;1.96e-15;34!UBERON:0002020;1.96e-15;34!UBERON:0000956;1.12e-14;25!UBERON:0000203;1.12e-14;25!UBERON:0002619;6.08e-14;22!UBERON:0002780;6.43e-14;41!UBERON:0001890;6.43e-14;41!UBERON:0001950;2.98e-13;20!UBERON:0007023;4.27e-13;114!UBERON:0000073;8.50e-13;53!UBERON:0002616;8.50e-13;53!UBERON:0001017;1.18e-12;75!UBERON:0000955;3.35e-11;68!UBERON:0001016;1.01e-10;83!UBERON:0000922;7.75e-08;49!UBERON:0011216;9.12e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.04e-49,114;UBERON:0001017,6.34e-28,81;UBERON:0001016,1.23e-27,89;UBERON:0011216,3.22e-26,223;UBERON:0000955,1.10e-25,68;UBERON:0006238,1.10e-25,68;UBERON:0001049,3.69e-24,56;UBERON:0005068,3.69e-24,56;UBERON:0006241,3.69e-24,56;UBERON:0007135,3.69e-24,56;UBERON:0000073,1.04e-22,53;UBERON:0002616,1.04e-22,53;UBERON:0002780,3.63e-19,41;UBERON:0001890,3.63e-19,41;UBERON:0003080,3.63e-19,41;UBERON:0006240,3.63e-19,41;UBERON:0001893,3.44e-18,34;UBERON:0003528,7.64e-18,34;UBERON:0002020,7.64e-18,34;UBERON:0001869,1.31e-17,32;UBERON:0003075,1.46e-17,82;UBERON:0007284,1.46e-17,82;UBERON:0002346,2.36e-17,86;UBERON:0002791,3.81e-17,32;UBERON:0004121,3.83e-17,171;UBERON:0000924,3.83e-17,171;UBERON:0006601,3.83e-17,171;UBERON:0000956,8.35e-15,25;UBERON:0000203,8.35e-15,25;UBERON:0002619,5.37e-14,22;UBERON:0010314,1.67e-13,132;UBERON:0001950,2.62e-13,20;UBERON:0010371,1.29e-12,104;UBERON:0003056,6.19e-11,61;UBERON:0000923,3.85e-10,560;UBERON:0010316,3.85e-10,560;UBERON:0005291,3.85e-10,560;UBERON:0006598,3.85e-10,560;UBERON:0010317,3.85e-10,560;UBERON:0002532,3.85e-10,560;UBERON:0002050,4.11e-10,564;UBERON:0005423,1.46e-09,581;UBERON:0000922,3.37e-09,592;UBERON:0004111,1.38e-08,240;UBERON:0000479,1.78e-08,773;UBERON:0000119,1.97e-08,309;UBERON:0000025,2.71e-08,192;UBERON:0000483,1.06e-07,306 | |||
|phase1_expression=51.0516245750264,91.6350242253408,11.4173067317737,103.075497303724,11.6209884551095,31.4041868676133,0,0,0,1.22866968250754,0,0,0.791300934685361,0,0,0,0,0,0,5.29420549730188,2.24400760368678,3.76145665773705,2.86235987131057,1.77936752594749,9.66678324879982,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.42938867502708,0,0,0.434539556882471,0,0.486634870302636,0,0.443458794925128,0.790513071238134,16.7653216637072,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0,0,0,0,1.25849830862972,6.32771496462155,0.208994966536811,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0.982297011124877,1.57170560838319,0.900891843866578,0,0,0.366403487860815,0,0,5.66922267785295,0,0,0.662045904066094,0.573673241497627,0,2.80338800071154,0,0.74000264525148,0.933633106199299,3.63718814588158,2.45192854670188,155.141363336055,69.1411109375999,0,0,0,0,0.117434498643765,1.78060238804945,2.52811452064047,0,0.122834317311768,0,1.18800285728205,0,0,0,2.52504170931099,1.87677779807946,0,1.31693286264251,0,0.751190294532984,3.17610112848059,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0.243947412259191,0,0.813357600086629,0.932949495138334,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0,0.591534000199219,0.674338760312407,0.482022059766964,0.110293972732394,1.08939722046203,0.474541238222193,0.539325232640658,0.588664395376038,0,2.21446636387394,18.231430594448,2.8810180793198,2.94017422771084,1.26755034821831,0,17.1329072937607,0,0.491953754172454,0,0.219500570817251,0,1.00528972411631,0.555530670951178,0,0,0,0.231860809950154,4.81375646366869,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,0.581267877027924,1.15014803749563,0,0,1.4512968087854,0.432359860250884,1.13618190083742,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,16.2590072300773,10.0270815831654,8.28722629776735,0.775630294546667,0,0.845302752556,0,0,0.514414748524284,0,0.266422179016099,7.14889968290738,0,0,0,7.10783897485092,0,0,0,0,0,0,0,8.86611965318856,0,0,12.3064110667442,2.4657158706046,39.0352899862972,0,0,0,0,1.52456774533478,1.30139853857622,4.63973287666617,2.17771144934653,5.10351001322531,0,0,0,0,0.500170521059677,0,0.415941723061614,0.178428988797162,0,4.09994952474496,2.10662269809403,0,2.0694614258501,0,0.553107505625109,0,9.20265440074881,10.6374461381365,0,0,0,1.21251028578504,0,0.604780586659361,27.5399666678842,144.254254890779,80.268787007859,5.76626171650654,95.6892555754736,4.98647155545183,14.8418066444991,0,0,0,0,0.116210378459959,1.69203229428271,0.40101294060657,0.184161977871793,1.7222167224691,0.182091168006717,0.524497659837696,0.451199612907412,0,0.784349769176855,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,14.9409466889197,127.189986632679,169.309493837047,0.574265537996172,0.650060246036521,0,1.35339005608971,1.54048617114644,1.84204409671355,6.34048233428841,0.322260734604821,1.74020032697074,3.74997160630844,15.8477023451192,1.15699440752685,1.34533047155574,1.14851441245126,1.4162089319777,0,0,0,0.308033580176089,0.532306030317022,0,0,0.715624433709956,11.16475108079,32.9034601707475,4.5751246541718,0.767693373934002,0,0,0,1.97859703341646,0.274537029736055,0.824686816419805,0.606547444719948,0,0,10.2403085208814,0,0,0,0.141405431953713,0,0,15.2590964305481,9.64591947558278,0,0,0.405820753925408,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,0.699869440489966,0.192444225451024,2.68120910214315,0,16.192733733606,1.72202149068492,0,39.0218535112275,2.75668080248351,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,9.36861722918718,0,0,0,0,0,0,0,0,0,0,0,65.9286806723523,0.121360521749513,0,71.3181728484097,0,0.593929361665277,0,13.9180670687282,13.3635945589987,0.556543525114529,21.7541113979323,0.422250816255987,152.424711012068,5.52567831062295,0,6.74973304514222,0,0,0,0,0,29.4943782854432,0,0,14.5399911914283,15.6778085893529,15.9691038400955,0,0,84.8249503258708,3.07242310370849,0,0.236387681767936,0.689486746482929,0.291604613383254,2.95162491386597,5.31444831488303,2.77371808838438,1.52581736317083,1.87984741883082,1.18219047581419,18.4283733609337,0,35.4136310467652,33.3964121906479,23.1302373369412,0.69169171316418,0,0.325942115766024,4.46601623624687,0,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0.141353071433941,30.5107982036348,14.9289289661776,9.19958670834727,17.7198742030751,23.4251691657691,18.7817187198684,24.0170483862547,5.52689290441552,28.0902176554576,0.937057782901357,0,0.391329237864179,0.971121518136371,7.10251925128903,18.1486074072996,5.81538247097931,65.9667891321414,3.30711522711884,3.62908669890365,0,0,0.313932918407225,0,0,0,0.173559738335131,8.91730816470837,0,42.4585803828133,0,0,0,0,24.9261772375238,0.0882561266915003,21.6941511149311,0,0,18.803306398896,0.195551382734803,0,219.643131586794,8.79162282161373,0,0.80175617316141,0,0,0,0.942776138467182,0,0.104602846312333,0.611989305817931,0.288950589901519,8.40588404193705,4.79168826121976,0,0.429765441419957,23.9227492394176,42.7302073946549,55.6859830348391,28.7149209830726,6.58940701646671,14.1644595885068,17.1842022230242,17.2661524290886,3.96329871896644,0,0,0,0,0,0,5.56660782866512,5.44813624446302,0.643012593860077,0.550157746388935,0.415440338029185,0.2249738915515,10.0594254092533,21.9305899535469,12.7465181287721,7.80176502262062,7.81573363211472,0.105600336519406,0,0,42.881719582402,10.5934715258469,0,0,0,0,0,0.328370082997356,0.170388021785422,2.03961764736226,14.9483278351644,10.6005511129777,5.81773303626977,4.49590845925146,0,0,20.289608387862,15.7204305099666,17.8122793799294,29.2737952869051,0.988058159489721,0,0,90.3069553593327,281.023371199447,110.897098788373,30.8200272867216,0.157054096250234,11.5188863395708,12.3246527550983,13.270238654889,4.0138643698305,5.54645257684261,8.81768921767645,7.74752355642893,14.2477665076802,0.151649117541648,0,0,9.36669811613763,1.44921028610825,0,0.701139929541673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,2.52369796457302,0,0,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0.353378291891762,0,0,0,0,1.21543982470953,14.1023604874765,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0.139879507719444,1.86623178009892,5.24366922344972,69.115704105273,0.943595651135378,4.47759516587257,1.01839517972415,0,17.2270712320013,0,1.90802610392051,1.34064966502131,0,1.41070377476274,1.8374728641192,13.1669911447742,9.91876034279095,9.73766540248623,16.6144255035012,5.5455773168778,17.7042566308398,16.1475645631851,7.13847101295772,0,1.76954585021611,4.4022863645203,0.231051332300676,0,5.52287940848081,176.239772795019,83.2578334826278,1.21023041222112,4.68908406739856,0,0.327543835020193,0,17.8299223392562,7.81078098613847,12.6078945865722,16.6783580809975,5.4697480901822,4.93431990171464,111.647515137591,0.175871244359621,0.255524855279191,4.82131652290458,4.70797211106354,4.85572483389305,4.09791944432336,16.6760455905761,0,0,5.16569970623921,18.1532855033463,0.827356886187777,0,34.6154539470767,3.61365856806804,0,8.21842848458546,0,0,21.8003459738802,0.790068058663633,0,0.869291361512897,4.00855682365126,6.42370108905414,3.7558064960669,6.91259661814092,5.59295566466361,0,0,8.89112805400951,0.68732060563215,0,0,0,0,0,11.6537190693821,26.7949925894805,27.8355463521168,30.1140815696666,3.9769708788558,1.39265542612958,0.475680363110274,8.01917182476616,0,0.301925687133347,9.87829223781692,12.6764545092295,0,25.985722105914,0,9.42280642151737,2.0793248022896,23.6687207446704,0,16.8231213183938,13.6006143624248,0,1.96409332466223,0.352894871715692,0,13.1460549884373,7.79839781787719,2.58011249672612,0.157771562193185,23.7290300766292,7.85431242612679,13.7546978534004,0,1.84870251452567,0,0,1.96678029534652,35.8556757862367,0.61193297845189,0.801652215796681,1.74600309116205,0.752122617877125,35.0097585768266,8.03892390468535,4.1458471972939,2.79269088827117,17.2719525339795,15.7122524766069,19.6350285901459,21.415776432071,0,11.6474299649042,23.041359541237,21.5539580417992,16.7694317531788,4.24317933991901,20.8711617692688,17.9636592534847,0.244209805832924,0,0,0,42.2353696326218,40.5841594687117,16.2758471326295,31.2905683867191,64.2063401555374,0 | |||
|short_description=p1@CCDC3 | |||
}} |
Latest revision as of 02:29, 17 September 2015
Short description: | p1@CCDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_031455, uc001ilq.1_5end |
EntrezGene: | CCDC3 |
HGNC: | 23813 |
UniProt: | Q9BQI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data