FFCP PHASE1:Hg19::chr17:80803529..80803573,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=B7Z407 | |||
|association_with_transcript=-280bp_to_AK296594_5end | |||
|cluster_id=chr17:80803529..80803573,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_AK296594_5end | |||
|id=chr17:80803529..80803573,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.45e-28!24;CL:0000115!9.31e-26!35;CL:0000071!1.73e-21!18;CL:0002546!1.73e-21!18;CL:0002078!2.10e-20!44;CL:0000213!3.99e-12!57;CL:0000215!3.99e-12!57;CL:1000413!2.31e-11!9;CL:0005020!2.17e-08!6;CL:0002138!2.17e-08!6;CL:0005022!2.17e-08!6;CL:0002543!2.75e-08!6;CL:0002544!5.19e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.68e-43;24!CL:0000115;1.13e-35;36!CL:0000071;2.44e-32;18!CL:0002078;1.88e-20;45!CL:1000413;1.11e-16;9!CL:0000213;3.36e-14;58!CL:0000215;3.36e-14;58!CL:0002138;4.10e-12;6!CL:0002543;6.08e-12;6!CL:0002544;1.64e-11;6!CL:0002144;5.64e-07;3!CL:0002618;8.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.87e-43,24;CL:0000115,2.13e-42,36;CL:0000071,2.43e-32,18;CL:0002546,2.43e-32,18;CL:0002078,9.05e-32,45;CL:0000213,2.49e-22,58;CL:0000215,2.49e-22,58;CL:1000413,1.12e-16,9;CL:0005020,4.26e-12,6;CL:0002138,4.26e-12,6;CL:0005022,4.26e-12,6;CL:0002543,6.14e-12,6;CL:0002544,1.63e-11,6;CL:0000222,3.10e-07,121;CL:0002144,5.51e-07,3;CL:0002618,8.96e-07,3;CL:0002188,9.99e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.44e-32;18!CL:0005022;4.10e-12;6!UBERON:0004872;7.34e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.34e-55!115;UBERON:0004111!3.12e-31!241;UBERON:0000477!2.06e-28!286;UBERON:0000025!1.11e-26!194;UBERON:0001049!2.82e-25!57;UBERON:0005068!2.82e-25!57;UBERON:0006241!2.82e-25!57;UBERON:0007135!2.82e-25!57;UBERON:0002616!1.48e-22!59;UBERON:0001986!1.73e-21!18;UBERON:0004638!1.73e-21!18;UBERON:0004852!1.73e-21!18;UBERON:0003080!7.17e-19!42;UBERON:0000955!1.51e-18!69;UBERON:0006238!1.51e-18!69;UBERON:0003075!2.96e-18!86;UBERON:0007284!2.96e-18!86;UBERON:0002020!3.48e-18!34;UBERON:0003528!3.48e-18!34;UBERON:0002780!5.79e-18!41;UBERON:0001890!5.79e-18!41;UBERON:0006240!5.79e-18!41;UBERON:0000119!1.49e-17!312;UBERON:0001893!1.69e-17!34;UBERON:0000483!4.38e-17!309;UBERON:0002791!5.89e-17!33;UBERON:0001017!7.40e-17!82;UBERON:0002346!1.06e-16!90;UBERON:0005743!2.08e-16!86;UBERON:0001869!2.53e-16!32;UBERON:0000487!3.21e-16!22;UBERON:0000073!6.11e-15!94;UBERON:0001016!6.11e-15!94;UBERON:0006914!1.25e-14!25;UBERON:0002619!3.46e-13!22;UBERON:0000467!1.98e-12!625;UBERON:0000480!2.51e-12!626;UBERON:0000956!5.79e-12!25;UBERON:0000203!5.79e-12!25;UBERON:0001950!7.39e-12!20;UBERON:0000055!8.02e-12!69;UBERON:0000468!8.54e-12!659;UBERON:0003056!2.10e-11!61;UBERON:0003915!2.31e-11!9;UBERON:0004700!2.31e-11!9;UBERON:0001917!2.31e-11!9;UBERON:0000153!3.97e-11!129;UBERON:0007811!3.97e-11!129;UBERON:0004872!2.31e-10!84;UBERON:0000033!2.33e-10!123;UBERON:0002049!3.61e-10!79;UBERON:0007798!3.61e-10!79;UBERON:0001009!9.14e-10!113;UBERON:0000064!1.98e-09!219;UBERON:0002465!5.53e-09!10;UBERON:0004535!1.32e-08!110;UBERON:0000922!1.38e-08!612;UBERON:0000481!1.52e-08!347;UBERON:0003914!1.98e-08!118;UBERON:0002298!2.23e-08!8;UBERON:0002050!2.70e-08!605;UBERON:0005423!2.70e-08!605;UBERON:0004121!2.83e-08!169;UBERON:0001981!4.46e-08!60;UBERON:0007500!4.46e-08!60;UBERON:0004537!4.46e-08!60;UBERON:0006965!4.46e-08!60;UBERON:0002308!5.32e-08!9;UBERON:0000125!5.32e-08!9;UBERON:0000923!6.33e-08!604;UBERON:0005291!6.33e-08!604;UBERON:0006598!6.33e-08!604;UBERON:0002532!6.33e-08!604;UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0002420!1.13e-07!9;UBERON:0007245!1.13e-07!9;UBERON:0010009!1.13e-07!9;UBERON:0010011!1.13e-07!9;UBERON:0000454!1.13e-07!9;UBERON:0003076!1.37e-07!15;UBERON:0003057!1.37e-07!15;UBERON:0001473!1.86e-07!8;UBERON:0004536!1.86e-07!8;UBERON:0006558!1.86e-07!8;UBERON:0001871!3.78e-07!7;UBERON:0003103!9.55e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.44e-32;18!UBERON:0001986;2.44e-32;18!UBERON:0004852;2.44e-32;18!UBERON:0000487;2.49e-25;22!UBERON:0006914;1.47e-21;25!UBERON:0003915;1.11e-16;9!UBERON:0004700;1.11e-16;9!UBERON:0001917;1.11e-16;9!UBERON:0000490;8.13e-14;33!UBERON:0002465;3.38e-11;10!UBERON:0001638;9.01e-10;9!UBERON:0003920;9.01e-10;9!UBERON:0004582;9.01e-10;9!UBERON:0000055;1.19e-09;65!UBERON:0002298;2.74e-09;6!UBERON:0001473;8.50e-09;8!UBERON:0004536;8.50e-09;8!UBERON:0006558;8.50e-09;8!UBERON:0003528;6.33e-08;34!UBERON:0002020;6.33e-08;34!UBERON:0000073;7.97e-08;53!UBERON:0002616;7.97e-08;53!UBERON:0000125;1.19e-07;9!UBERON:0002308;1.19e-07;9!UBERON:0007023;1.21e-07;114!UBERON:0004733;3.62e-07;12!UBERON:0002028;3.62e-07;12!UBERON:0002791;4.29e-07;32!UBERON:0010523;5.64e-07;3!UBERON:0001915;5.64e-07;3!UBERON:0001982;5.64e-07;3!UBERON:0007500;8.45e-07;56!UBERON:0001981;8.45e-07;56!UBERON:0004537;8.45e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.84e-33,114;UBERON:0004638,2.43e-32,18;UBERON:0001986,2.43e-32,18;UBERON:0004852,2.43e-32,18;UBERON:0000487,2.48e-25,22;UBERON:0004111,8.78e-24,240;UBERON:0006914,1.46e-21,25;UBERON:0000025,1.56e-21,192;UBERON:0000055,1.23e-18,68;UBERON:0003915,1.12e-16,9;UBERON:0004700,1.12e-16,9;UBERON:0001917,1.12e-16,9;UBERON:0002049,5.49e-15,78;UBERON:0007798,5.49e-15,78;UBERON:0004872,5.96e-14,83;UBERON:0007500,2.23e-13,59;UBERON:0001981,2.23e-13,59;UBERON:0004537,2.23e-13,59;UBERON:0006965,2.23e-13,59;UBERON:0001009,2.83e-12,112;UBERON:0001049,4.23e-12,56;UBERON:0005068,4.23e-12,56;UBERON:0006241,4.23e-12,56;UBERON:0007135,4.23e-12,56;UBERON:0000073,4.77e-12,53;UBERON:0002616,4.77e-12,53;UBERON:0000483,7.95e-12,306;UBERON:0000119,1.58e-11,309;UBERON:0004535,3.45e-11,109;UBERON:0002465,4.15e-11,10;UBERON:0003914,2.84e-10,117;UBERON:0001638,7.24e-10,9;UBERON:0003920,7.24e-10,9;UBERON:0004582,7.24e-10,9;UBERON:0003075,1.43e-09,82;UBERON:0007284,1.43e-09,82;UBERON:0003528,1.73e-09,34;UBERON:0002020,1.73e-09,34;UBERON:0002298,2.57e-09,6;UBERON:0003887,7.88e-09,12;UBERON:0001473,8.74e-09,8;UBERON:0004536,8.74e-09,8;UBERON:0006558,8.74e-09,8;UBERON:0002346,8.83e-09,86;UBERON:0000955,8.03e-08,68;UBERON:0006238,8.03e-08,68;UBERON:0002791,9.43e-08,32;UBERON:0000125,1.27e-07,9;UBERON:0002308,1.27e-07,9;UBERON:0004876,2.14e-07,11;UBERON:0010314,2.22e-07,132;UBERON:0004733,2.93e-07,12;UBERON:0002028,2.93e-07,12;UBERON:0007277,2.93e-07,12;UBERON:0002780,3.65e-07,41;UBERON:0001890,3.65e-07,41;UBERON:0003080,3.65e-07,41;UBERON:0006240,3.65e-07,41;UBERON:0001893,4.19e-07,34;UBERON:0010523,5.51e-07,3;UBERON:0001915,5.51e-07,3;UBERON:0001982,5.51e-07,3;UBERON:0001017,5.69e-07,81;UBERON:0000080,6.63e-07,9;UBERON:0002120,6.63e-07,9;UBERON:0004875,6.63e-07,9;UBERON:0005721,6.63e-07,9;UBERON:0005754,6.63e-07,9;UBERON:0007297,6.63e-07,9;UBERON:0003076,6.77e-07,15;UBERON:0003057,6.77e-07,15 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0,0,0,0,0,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,7.35420907256809,7.74211135595512,11.4556365530506,3.39184765154406,11.3264847776675,12.105193845363,11.9127130925982,16.538672586837,12.4518191940349,29.7901345360556,18.1273192699116,15.9657142200888,11.7149787623121,9.55924008899259,19.4434067491622,13.2163597860438,13.4717623575702,6.53146586803269,33.7296602424943,9.49265659568129,9.70969242831159,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.808264032418128,0.163461903113459,0.605429710579726,0,0,0,2.85235910772225,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85786545549578,2.80483547606892,0.4115740113314,0,0,0,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,11.4049493731248,8.33373922637899,11.4152491340759,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.768834895534206,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,14.7853399292166,10.3757160218675,4.75015015424707,27.7609054842521,0,0,0,0.831076008928724,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0.096670718292122,0,0,0,0.537101224341368,1.0151168573996,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0,0,0.719489830333259,0,0.589062011728432,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6950970868483,0,0,0,0,0,0,0.994147647766298,1.82870241333667,0,0,0,4.38345574152353,1.10513566212459,0,0,0,0,0,0,0,1.38100767891707,0,0,0.969332746095218,0.185536196323703,0,0,0,5.79999660347835,0,0,0,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,1.65868889896837,0.886642856860642,0,0,0,3.61666214967846,0,0.23056390438806,0.269272933229316,0.217294743844016,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.973033209536731,2.4441205797345,0,0,0,0.337005664903385,3.21031058919516,0,0,0,0,0.789168805698781,1.20990716048664,1.22429104652196,2.21153028699708,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.22308667769421,0,0,0,0,1.06687918137261,4.32455020788351,2.25980740780532,0,0,0.696418755514666,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.50595916781192,0,0,0,4.46851842035607,5.72901060029209,5.74298419661451,1.39775300349294,3.43380838509257,0.223171457441873,4.83721001904429,0,0,0,0,0,0,0,0.795229689809303,1.90684768556206,0,0,0,0,0,0.91124334987037,0,1.26089131678717,4.09145787452985,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,2.06852730178481,3.17358244182456,0,0,2.0289608387862,8.17462386518263,7.45630299624952,2.97699613087171,0,0,0,1.08803560673895,3.0082787282724,0.919036730290385,0.327872630709804,0,2.65820453990096,1.22026264901963,1.752673029891,2.86704597845036,2.3295100822739,1.55241007353459,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.932623203496683,0,0,0,0,1.65882483136342,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,1.27707087245721,0.205116364240755,0.756215088665154,0.829887029570615,0.807378228159255,0,0,0,0,0,0,0,0,1.72983755203292,0,1.56302802246618,0,0,0,0.742913430802341,0,2.48024155801421,0.634158101939068,1.09394961803644,0.548257766857182,5.45832296228224,0,0,0,2.01770233331294,2.42786241694653,0.91064876540519,3.45939243634291,0,0,1.42736439251347,0.591954962065642,0,0,1.72684804271131,1.57115589916002,0,0.913158720509496,0,0,4.57449882730601,0,0,0,0,0,0,0,0.430227358820278,0.591660003652827,1.27820107138737,2.9637093513365,0,0,0,0,0,0,1.94228651156368,0.821302454849976,0,1.94284397223656,0,0,0,0,0,1.35866559210006,0.617393264863557,1.09279780251979,0,0.980593287015622,0,0.785233868459781,0.594092800654172,1.2679671827502,0,4.60521198101283,14.4385669060813,0,0,0,0,0.730336388246517,0.458729283404541,1.72007499781742,0,0.747906392100062,0.436350690340377,3.1741610430924,0.371995018166751,0,0,0,0,0,0,0,0,0,1.13668047327359,0.803892390468535,0,0.620597975171371,2.77204176471275,2.85677317756488,0,1.92431614317159,0,0.572824424503484,3.43599221228973,0.435433495793923,1.36893320434112,1.01028079521881,1.29099969706817,0.665320713092027,0,0,0,0,0,10.7572470880922,4.06896178315738,5.3260541934841,1.81146414231924,0 | |||
|short_description=p1@AK296594 | |||
}} |
Latest revision as of 14:08, 18 September 2015
Short description: | p1@AK296594 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK296594_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -280bp_to_AK296594_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.87e-43 | 24 |
endothelial cell | 2.13e-42 | 36 |
blood vessel endothelial cell | 2.43e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.43e-32 | 18 |
meso-epithelial cell | 9.05e-32 | 45 |
lining cell | 2.49e-22 | 58 |
barrier cell | 2.49e-22 | 58 |
endothelial cell of artery | 1.12e-16 | 9 |
lymphangioblast | 4.26e-12 | 6 |
endothelial cell of lymphatic vessel | 4.26e-12 | 6 |
vascular lymphangioblast | 4.26e-12 | 6 |
vein endothelial cell | 6.14e-12 | 6 |
aortic endothelial cell | 1.63e-11 | 6 |
mesodermal cell | 3.10e-07 | 121 |
capillary endothelial cell | 5.51e-07 | 3 |
endothelial cell of umbilical vein | 8.96e-07 | 3 |
glomerular endothelial cell | 9.99e-07 | 5 |