FFCP PHASE1:Hg19::chr19:46405999..46406008,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20178 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VE0 | |||
|association_with_transcript=-137bp_to_ENST00000322217,NM_001012643,uc002pdt.2_5end | |||
|cluster_id=chr19:46405999..46406008,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_MYPOP_5end | |||
|id=chr19:46405999..46406008,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;4.33e-07;1!CL:0000557;4.33e-07;1!CL:0002591;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.19e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.31e-08;82!UBERON:0001045;4.33e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-22!115;UBERON:0001893!9.90e-16!34;UBERON:0002020!1.05e-15!34;UBERON:0003528!1.05e-15!34;UBERON:0001869!2.08e-15!32;UBERON:0002791!6.42e-15!33;UBERON:0002619!1.45e-14!22;UBERON:0002780!5.59e-14!41;UBERON:0001890!5.59e-14!41;UBERON:0006240!5.59e-14!41;UBERON:0003080!2.44e-13!42;UBERON:0001950!6.54e-13!20;UBERON:0001049!3.79e-12!57;UBERON:0005068!3.79e-12!57;UBERON:0006241!3.79e-12!57;UBERON:0007135!3.79e-12!57;UBERON:0000956!8.95e-12!25;UBERON:0000203!8.95e-12!25;UBERON:0002616!3.03e-11!59;UBERON:0000955!7.61e-10!69;UBERON:0006238!7.61e-10!69;UBERON:0002346!1.16e-09!90;UBERON:0003075!1.23e-09!86;UBERON:0007284!1.23e-09!86;UBERON:0003056!5.09e-09!61;UBERON:0001017!1.41e-08!82;UBERON:0005743!4.16e-08!86;UBERON:0000073!3.59e-07!94;UBERON:0001016!3.59e-07!94;UBERON:0000153!6.67e-07!129;UBERON:0007811!6.67e-07!129;UBERON:0000200!9.62e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.17e-72;22!UBERON:0001869;3.23e-66;32!UBERON:0000956;1.75e-63;25!UBERON:0000203;1.75e-63;25!UBERON:0002791;8.48e-62;32!UBERON:0001950;1.02e-61;20!UBERON:0001893;1.27e-60;34!UBERON:0003528;9.99e-56;34!UBERON:0002020;9.99e-56;34!UBERON:0002780;1.23e-40;41!UBERON:0001890;1.23e-40;41!UBERON:0000200;2.85e-35;6!UBERON:0000073;3.87e-26;53!UBERON:0002616;3.87e-26;53!UBERON:0002021;6.37e-20;5!UBERON:0000349;1.51e-19;5!UBERON:0001870;2.91e-18;3!UBERON:0001017;5.80e-18;75!UBERON:0000955;4.66e-17;68!UBERON:0001871;5.16e-14;6!UBERON:0002771;6.90e-13;2!UBERON:0001954;6.90e-13;2!UBERON:0003022;6.90e-13;2!UBERON:0002421;6.90e-13;2!UBERON:0002600;6.90e-13;2!UBERON:0002370;1.63e-12;2!UBERON:0002702;1.63e-12;2!UBERON:0005058;1.63e-12;2!UBERON:0009113;1.63e-12;2!UBERON:0001016;6.64e-12;83!UBERON:0001872;1.01e-11;5!UBERON:0007023;4.40e-11;114!UBERON:0002420;9.12e-11;9!UBERON:0007245;9.12e-11;9!UBERON:0010009;9.12e-11;9!UBERON:0010011;9.12e-11;9!UBERON:0000454;9.12e-11;9!UBERON:0009663;4.07e-08;7!UBERON:0002902;1.02e-07;1!UBERON:0009899;1.02e-07;1!UBERON:0002022;1.19e-07;1!UBERON:0007190;1.19e-07;1!UBERON:0002581;1.79e-07;1!UBERON:0001882;1.79e-07;1!UBERON:0005403;1.79e-07;1!UBERON:0001874;4.33e-07;1!UBERON:0001154;4.33e-07;1!UBERON:0001153;4.33e-07;1!UBERON:0009854;4.33e-07;1!UBERON:0011216;4.92e-07;132!UBERON:0000369;7.30e-07;4!UBERON:0002435;7.30e-07;4!UBERON:0000204;7.30e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.59e-76,32;UBERON:0002619,1.65e-72,22;UBERON:0001893,1.05e-71,34;UBERON:0002791,7.15e-69,32;UBERON:0003528,1.07e-64,34;UBERON:0002020,1.07e-64,34;UBERON:0000956,9.86e-64,25;UBERON:0000203,9.86e-64,25;UBERON:0001950,6.56e-62,20;UBERON:0002780,5.01e-59,41;UBERON:0001890,5.01e-59,41;UBERON:0003080,5.01e-59,41;UBERON:0006240,5.01e-59,41;UBERON:0000073,1.82e-49,53;UBERON:0002616,1.82e-49,53;UBERON:0001049,1.27e-46,56;UBERON:0005068,1.27e-46,56;UBERON:0006241,1.27e-46,56;UBERON:0007135,1.27e-46,56;UBERON:0000955,7.99e-41,68;UBERON:0006238,7.99e-41,68;UBERON:0003056,1.45e-38,61;UBERON:0001017,7.24e-37,81;UBERON:0000200,1.32e-35,6;UBERON:0003075,1.39e-33,82;UBERON:0007284,1.39e-33,82;UBERON:0001016,8.87e-33,89;UBERON:0002346,8.06e-32,86;UBERON:0007023,2.32e-30,114;UBERON:0010371,1.52e-25,104;UBERON:0002021,9.18e-20,5;UBERON:0000349,1.71e-19,5;UBERON:0010314,3.72e-19,132;UBERON:0001870,1.76e-18,3;UBERON:0004121,1.70e-16,171;UBERON:0000924,1.70e-16,171;UBERON:0006601,1.70e-16,171;UBERON:0011216,3.25e-15,223;UBERON:0001871,4.45e-14,6;UBERON:0002771,4.68e-13,2;UBERON:0001954,5.28e-13,2;UBERON:0003022,5.28e-13,2;UBERON:0002421,5.28e-13,2;UBERON:0002600,5.28e-13,2;UBERON:0000025,5.35e-13,192;UBERON:0002702,1.29e-12,2;UBERON:0001872,8.74e-12,5;UBERON:0002420,9.37e-11,9;UBERON:0007245,9.37e-11,9;UBERON:0010009,9.37e-11,9;UBERON:0010011,9.37e-11,9;UBERON:0000454,9.37e-11,9;UBERON:0004111,2.02e-09,240;UBERON:0003351,2.92e-09,6;UBERON:0009663,3.74e-08,7;UBERON:0000483,5.77e-08,306;UBERON:0000119,7.75e-08,309;UBERON:0002902,1.06e-07,1;UBERON:0009899,1.06e-07,1;UBERON:0002022,1.12e-07,1;UBERON:0007190,1.27e-07,1;UBERON:0002581,1.44e-07,1;UBERON:0001882,2.09e-07,1;UBERON:0005403,2.09e-07,1;UBERON:0001874,2.67e-07,1;UBERON:0001154,6.20e-07,1;UBERON:0001153,6.20e-07,1;UBERON:0001045,6.20e-07,1;UBERON:0000369,6.22e-07,4;UBERON:0002435,6.22e-07,4;UBERON:0000204,6.22e-07,4;UBERON:0010082,6.22e-07,4;UBERON:0002370,9.11e-07,4;UBERON:0005058,9.11e-07,4;UBERON:0009113,9.11e-07,4;UBERON:0003295,9.11e-07,4;UBERON:0005562,9.11e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0,0.334372990781356,0.651844533267181,0.473447805734733,0,0,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0.328875809207352,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0.113309342697566,0,0.34362744548263,0,0.637130828648193,0,0,0,0.127986611154418,0,0.947109008176067,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,1.0478326039817,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,1.32438929824395,0.245976877086227,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.576479813667846,0.6312121671319,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.448340575974109,0.788123040807709,0.646882724578552,0.641715181398742,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.431428401637234,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0.309123034943167,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,2.11004124615769,0.222617410045812,0,0,0,1.10513566212459,0,0.102268682502155,0.246169610922139,0,0,0.358042349351218,0,0.197286811273867,0,0,0.969332746095218,2.22643435588443,0,0,0.0874599999961957,0,0.227586896570999,0,0,0,0.583209226766509,0,0,0.964771509003264,0,1.3269511191747,0,1.31631238292384,0.10893846351899,0,0.461701551022782,0.341826167541004,0,0.0897576444097721,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0.652931232636591,0,0,0,0.442287822516696,0,0,0,0.104421949505455,0.202203398942031,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.91821828489147,0.252746318513952,0,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0.261177619741208,0.17472666824203,0,0.0967563312890851,0.219267951258557,0,0.0969890164884194,0.264768380074501,1.12990370390266,0.137041924646751,0,2.9756074099263,0.195551382734803,0.160317640503067,0.640358984218058,0.19980960958213,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,1.20084057741958,0.547621515567972,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,2.31545790389679,0,0,0.415440338029185,0,0,3.28047605953333,0,0.0788057072991982,0.262272940674991,0.105600336519406,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.314108192500469,1.77213635993397,1.70836770862748,1.1267183763585,0,0.110929051536852,0.434674820589684,0,0,0.151649117541648,0.285465333544967,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,2.35039341457942,0,0.132864840313363,0,0.327609848846413,0.245772908753719,0.633936370075881,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0,0.637724760305049,0,0,0.318004350653419,0,0,0,0,2.24802287837608,4.25089728976755,2.55414174491442,1.02558182120378,0.504143392443436,4.01112064292464,0.645902582527404,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0.147856086217045,3.03919130782776,0,2.48024155801421,3.10737469950143,0.546974809018219,0.548257766857182,0.496211178389294,0.175871244359621,0,0,0,0.606965604236632,0.227662191351298,0.354809480650555,0.230467975111559,0.342976018874837,0.543757863814654,2.89400203676536,0,0.111231401892069,0.156986185701028,1.72827148907602,0,0.913158720509496,0,0,0.428859265059938,0,0,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0.487671699929078,0,0.205325613712494,0,0.485710993059139,0.467878926924211,0,0,0,0,0,0.463044948647668,0,0,0.245148321753905,0.235676547101626,0,0,0,0.169927114687817,0.187967835959707,0,0,0.357107877211315,0.352894871715692,0.561689566824178,0,0,0.143339583151451,0,2.85564258801842,0.872701380680755,0.5290268405154,0,0,0,0.126166424835079,0,0.126698501011437,0,0.26721740526556,0,0,0.757786982182394,0.803892390468535,0,0.20686599172379,0,0.23806443146374,1.35636710655613,1.36564371450887,0.112131862580613,0.0636471582781649,0.404234377916439,0.217716747896961,0.342233301085281,0.404112318087525,0,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p3@MYPOP | |||
}} |
Latest revision as of 19:38, 18 September 2015
Short description: | p3@MYPOP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYPOP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -137bp_to_ENST00000322217, NM_001012643, uc002pdt.2_5end |
EntrezGene: | MYPOP |
HGNC: | 20178 |
UniProt: | Q86VE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.19e-07 | 1 |