FFCP PHASE1:Hg19::chr19:6502341..6502352,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20774 | |||
|TSSclassifier=strong | |||
|UniProt=P04350 | |||
|association_with_transcript=-11bp_to_ENST00000264071,NM_006087,uc002mfg.1_5end | |||
|cluster_id=chr19:6502341..6502352,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_TUBB4A_5end | |||
|id=chr19:6502341..6502352,- | |||
|ontology_enrichment_celltype=CL:0000147!5.85e-09!14;CL:0000148!3.47e-07!10;CL:0000541!3.47e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.13e-11;14!CL:0000148;2.58e-10;10!CL:0000540;5.95e-07;6!CL:0000404;5.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.29e-11,14;CL:0000148,2.92e-10,10;CL:0000541,2.92e-10,10;CL:0000047,9.43e-09,8;CL:0000540,4.92e-07,6;CL:0000031,4.92e-07,6;CL:0000404,4.92e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.28e-15;82!CL:0000031;5.95e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.94e-46!86;UBERON:0000073!2.67e-45!94;UBERON:0001016!2.67e-45!94;UBERON:0001017!4.00e-43!82;UBERON:0001049!1.90e-38!57;UBERON:0005068!1.90e-38!57;UBERON:0006241!1.90e-38!57;UBERON:0007135!1.90e-38!57;UBERON:0002346!8.74e-37!90;UBERON:0003075!1.08e-34!86;UBERON:0007284!1.08e-34!86;UBERON:0000955!1.92e-34!69;UBERON:0006238!1.92e-34!69;UBERON:0002616!8.01e-32!59;UBERON:0002780!2.46e-31!41;UBERON:0001890!2.46e-31!41;UBERON:0006240!2.46e-31!41;UBERON:0003080!4.33e-30!42;UBERON:0007023!4.38e-29!115;UBERON:0001893!1.50e-27!34;UBERON:0002020!2.08e-27!34;UBERON:0003528!2.08e-27!34;UBERON:0003056!5.30e-27!61;UBERON:0002791!1.12e-26!33;UBERON:0001869!4.55e-26!32;UBERON:0000924!3.48e-21!173;UBERON:0006601!3.48e-21!173;UBERON:0000956!1.92e-20!25;UBERON:0000203!1.92e-20!25;UBERON:0002619!7.66e-20!22;UBERON:0004121!1.42e-19!169;UBERON:0001950!2.80e-18!20;UBERON:0000153!7.26e-18!129;UBERON:0007811!7.26e-18!129;UBERON:0000033!2.11e-17!123;UBERON:0000064!1.46e-09!219;UBERON:0003076!2.12e-09!15;UBERON:0003057!2.12e-09!15;UBERON:0002420!1.45e-08!9;UBERON:0007245!1.45e-08!9;UBERON:0010009!1.45e-08!9;UBERON:0010011!1.45e-08!9;UBERON:0000454!1.45e-08!9;UBERON:0002308!2.20e-08!9;UBERON:0000125!2.20e-08!9;UBERON:0004732!4.84e-08!13;UBERON:0001871!1.05e-07!7;UBERON:0004733!2.41e-07!12;UBERON:0002028!2.41e-07!12;UBERON:0007277!2.41e-07!12;UBERON:0000489!4.75e-07!32;UBERON:0009663!6.02e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.16e-32;34!UBERON:0003528;1.82e-32;34!UBERON:0002020;1.82e-32;34!UBERON:0001869;2.04e-32;32!UBERON:0002791;3.01e-32;32!UBERON:0002780;5.95e-31;41!UBERON:0001890;5.95e-31;41!UBERON:0002619;7.10e-30;22!UBERON:0000073;6.51e-28;53!UBERON:0002616;6.51e-28;53!UBERON:0001950;1.89e-27;20!UBERON:0000956;2.75e-27;25!UBERON:0000203;2.75e-27;25!UBERON:0001016;3.11e-22;83!UBERON:0000955;4.35e-22;68!UBERON:0001017;1.35e-21;75!UBERON:0002420;2.18e-12;9!UBERON:0007245;2.18e-12;9!UBERON:0010009;2.18e-12;9!UBERON:0010011;2.18e-12;9!UBERON:0000454;2.18e-12;9!UBERON:0000125;4.18e-12;9!UBERON:0002308;4.18e-12;9!UBERON:0001871;6.69e-10;6!UBERON:0009663;6.87e-10;7!UBERON:0004732;1.68e-09;13!UBERON:0000200;2.53e-09;6!UBERON:0004733;1.81e-08;12!UBERON:0002028;1.81e-08;12!UBERON:0011216;2.25e-08;132!UBERON:0002298;2.85e-08;6!UBERON:0007023;3.62e-08;114!UBERON:0002021;7.37e-08;5!UBERON:0001872;8.05e-08;5!UBERON:0000349;8.72e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.14e-62,89;UBERON:0001017,4.84e-61,81;UBERON:0001049,2.32e-53,56;UBERON:0005068,2.32e-53,56;UBERON:0006241,2.32e-53,56;UBERON:0007135,2.32e-53,56;UBERON:0000073,6.76e-50,53;UBERON:0002616,6.76e-50,53;UBERON:0000955,9.19e-48,68;UBERON:0006238,9.19e-48,68;UBERON:0002346,3.91e-43,86;UBERON:0002780,7.61e-43,41;UBERON:0001890,7.61e-43,41;UBERON:0003080,7.61e-43,41;UBERON:0006240,7.61e-43,41;UBERON:0003075,3.48e-41,82;UBERON:0007284,3.48e-41,82;UBERON:0001893,3.61e-38,34;UBERON:0003528,5.83e-38,34;UBERON:0002020,5.83e-38,34;UBERON:0001869,7.04e-36,32;UBERON:0002791,1.16e-35,32;UBERON:0003056,3.07e-35,61;UBERON:0002619,7.72e-30,22;UBERON:0004121,1.10e-29,171;UBERON:0000924,1.10e-29,171;UBERON:0006601,1.10e-29,171;UBERON:0010371,2.87e-29,104;UBERON:0001950,2.05e-27,20;UBERON:0000956,3.15e-27,25;UBERON:0000203,3.15e-27,25;UBERON:0007023,9.25e-25,114;UBERON:0010314,1.60e-22,132;UBERON:0011216,2.36e-22,223;UBERON:0002420,2.21e-12,9;UBERON:0007245,2.21e-12,9;UBERON:0010009,2.21e-12,9;UBERON:0010011,2.21e-12,9;UBERON:0000454,2.21e-12,9;UBERON:0000125,4.19e-12,9;UBERON:0002308,4.19e-12,9;UBERON:0003076,1.55e-11,15;UBERON:0003057,1.55e-11,15;UBERON:0000025,1.37e-10,192;UBERON:0009663,6.83e-10,7;UBERON:0001871,7.20e-10,6;UBERON:0004732,1.66e-09,13;UBERON:0000200,2.50e-09,6;UBERON:0004733,1.79e-08,12;UBERON:0002028,1.79e-08,12;UBERON:0007277,1.79e-08,12;UBERON:0002298,2.82e-08,6;UBERON:0002021,7.41e-08,5;UBERON:0001872,8.14e-08,5;UBERON:0000349,8.95e-08,5;UBERON:0000966,3.24e-07,6;UBERON:0005388,3.24e-07,6;UBERON:0001802,3.24e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.572471974262113,0.958120975510189,1.25542639594803,0.916960868975415,1.06730766284929,0.787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20118796110804,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.891283655081389,0,0,0,1.5370958367081,0.260118695119756,0.328875809207352,0,0,0,0.267540828089713,0,0.339928028092699,0,0,0,1.27426165729639,0,0,0.301150238155546,1.02389288923535,0,0.710331756132051,1.64225599384209,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.702678285545008,14.5386773802461,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5614478287215,2.65059536642971,4.53156377191122,2.59152637538426,2.77552935963191,1.82488679537915,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.404493924480493,0.588664395376038,0,0.738155454624648,0,0.4115740113314,0,0,0,1.18157981336281,1.32438929824395,1.10689594688802,0.514703430895577,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,4.69884417762051,4.20187268114105,7.03304683260282,10.2643467613623,4.62723717164956,4.20480280981484,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,5.22920075160176,3.29910870900788,1.2162378064119,0,0,0,0,0,0,0,0,1.00876629594175,0,0.431255149719035,0.256686072559497,1.52456774533478,39.0419561572865,17.0123538811093,27.1376349841645,17.2243462946354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0.902399225814824,2.0794141018192,3.13739907670742,4.38417673959782,1.68882606228601,0,0,0.215915916102139,1.54227252690289,1.89662506280697,9.03041592938736,0.509752546090077,0.831076008928724,1.56712328305525,0,0,4.10320200186223,3.93617574839647,3.57916234130733,0.206082023295445,0.732555718546747,1.32015199872941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.854592569019785,3.84991942105343,0.735120647943095,4.83088255326869,2.59684583357601,0,3.50737800003409,0.59873811429845,0,0.846694330895531,1.94773164164733,0,2.05411211129873,0,0,0,0.481764225311099,1.00899853595524,0,0.343505344755765,0,0,0.333698283423817,0.586164286206121,6.96015434738106,0,0,0.66614393599564,0,0,0,4.85442086998054,2.67464122265948,0.568272293612826,0,0,0,87.4849930034342,43.3261802544379,0,0,7.38938928447977,0.19924798825107,1.10513566212459,0,0.920418142519393,0.492339221844278,0,0,0,0,0.0986434056369336,2.3948309234694,0,107.595934816569,82.4708392658858,83.8377951605016,0,0,0,0,0,0,0.344743373241465,6.70690610781485,0.520874984799877,56.6874486920857,44.9824716072772,123.591206416837,67.8956655977719,84.5266190207146,60.3309842173424,0,0.139423744278603,0.153900517007594,0,0,0,0.434589487688032,0,0,0,0,0.156980256395025,0.166211681900156,0.902382642468723,0.392125068635479,0.503464760927528,0,0.317873157960757,0.632994193584081,0.326465616318295,0.706765357169704,4.760550074326,1.99052386215701,0.530745387020035,0.611030144933625,0.296521128680622,1.35920332841153,1.35748534357092,27.7018656550583,0,44.0417157963638,2.73682183823499,0.391329237864179,1.21390189767046,0,2.41981432097328,49.2777146225089,1.95878396848313,0.300646838828985,0.72581733978073,0,0.330991955875499,0,0,3.13070500632772,2.4961441142365,0.173559738335131,0,0,0.698906672968121,0.51595809741485,0,0,0,0.193978032976839,1.059073520298,9.7171718535629,0,0,75.3398471874956,0.195551382734803,0.0801588202515337,0.213452994739353,1.79828648623917,0.432271251462318,0.916292769327325,0,0,0.745515213392595,0.235694034616795,4.34893459435565,6.38077362505233,0,0,28.8201738580699,13.2798217525233,0,0.859530882839914,4.99485973130698,0.279282401272254,0,0,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0.0787831823072236,0,0,0.196854963029498,0,62.8231454949349,32.0078004362203,1.44677833618517,2.88832816854191,3.73896304226267,0,0,84.0773864147061,0,0.630445658393585,3.09482069996489,0.105600336519406,2.51002275065983,0,0.714695326373367,1.32418394073086,2.28841683889275,0,0,0,1.19730191562487,0.164185041498678,0,0.679872549120754,0.146552233678082,0,27.5372697050103,23.6696357119415,1.19760786519031,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0.395223263795889,0,0,0,0,0,0,0,94.8092952564675,101.525852398433,43.8168257472749,11.4681839138014,18.0814354005069,27.8191885177398,4.56550495289562,0,0.454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| |||
|short_description=p2@TUBB4A | |||
}} |
Latest revision as of 16:59, 24 September 2015
Short description: | p2@TUBB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBB4A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -11bp_to_ENST00000264071, NM_006087, uc002mfg.1_5end |
EntrezGene: | TUBB4A |
HGNC: | 20774 |
UniProt: | P04350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.29e-11 | 14 |
melanocyte | 2.92e-10 | 10 |
melanoblast | 2.92e-10 | 10 |
neuronal stem cell | 9.43e-09 | 8 |
neuron | 4.92e-07 | 6 |
neuroblast | 4.92e-07 | 6 |
electrically signaling cell | 4.92e-07 | 6 |