FFCP PHASE1:Hg19::chr1:114696485..114696496,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148281 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18638 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T7P8 | |||
|association_with_transcript=-13bp_to_ENST00000369547,ENST00000393296,NM_001253772,NR_045589,uc001eev.2_5end | |||
|cluster_id=chr1:114696485..114696496,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_SYT6_5end | |||
|id=chr1:114696485..114696496,- | |||
|ontology_enrichment_celltype=CL:0000047!8.74e-13!8;CL:0002322!3.52e-11!5;CL:0000540!4.71e-09!6;CL:0000031!4.71e-09!6;CL:0000404!4.71e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.73e-13;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.85e-13,5;CL:0000047,1.03e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.86e-45!82;UBERON:0000073!6.72e-45!94;UBERON:0001016!6.72e-45!94;UBERON:0005743!2.84e-42!86;UBERON:0001049!8.69e-39!57;UBERON:0005068!8.69e-39!57;UBERON:0006241!8.69e-39!57;UBERON:0007135!8.69e-39!57;UBERON:0002616!2.11e-30!59;UBERON:0000955!4.09e-30!69;UBERON:0006238!4.09e-30!69;UBERON:0002780!1.05e-26!41;UBERON:0001890!1.05e-26!41;UBERON:0006240!1.05e-26!41;UBERON:0003080!6.65e-26!42;UBERON:0001893!1.67e-25!34;UBERON:0002020!3.11e-25!34;UBERON:0003528!3.11e-25!34;UBERON:0002346!7.99e-24!90;UBERON:0002791!9.17e-24!33;UBERON:0003075!1.08e-23!86;UBERON:0007284!1.08e-23!86;UBERON:0001869!2.00e-22!32;UBERON:0000924!1.29e-21!173;UBERON:0006601!1.29e-21!173;UBERON:0004121!3.07e-21!169;UBERON:0002619!1.65e-18!22;UBERON:0001950!4.39e-18!20;UBERON:0007023!2.91e-17!115;UBERON:0000956!6.86e-16!25;UBERON:0000203!6.86e-16!25;UBERON:0003056!1.08e-15!61;UBERON:0003076!4.63e-14!15;UBERON:0003057!4.63e-14!15;UBERON:0000033!1.26e-13!123;UBERON:0000153!1.51e-12!129;UBERON:0007811!1.51e-12!129;UBERON:0002298!1.43e-11!8;UBERON:0002308!2.25e-11!9;UBERON:0000125!2.25e-11!9;UBERON:0004732!4.73e-11!13;UBERON:0000369!8.45e-10!4;UBERON:0002435!8.45e-10!4;UBERON:0000204!8.45e-10!4;UBERON:0010082!8.45e-10!4;UBERON:0004733!2.53e-09!12;UBERON:0002028!2.53e-09!12;UBERON:0007277!2.53e-09!12;UBERON:0002420!1.62e-08!9;UBERON:0007245!1.62e-08!9;UBERON:0010009!1.62e-08!9;UBERON:0010011!1.62e-08!9;UBERON:0000454!1.62e-08!9;UBERON:0002021!2.34e-08!5;UBERON:0009663!3.60e-08!7;UBERON:0000025!5.22e-08!194;UBERON:0001872!1.05e-07!5;UBERON:0005383!1.13e-07!3;UBERON:0005382!1.13e-07!3;UBERON:0002240!4.44e-07!3;UBERON:0000922!4.94e-07!612;UBERON:0006331!7.18e-07!3;UBERON:0001896!9.20e-07!3;UBERON:0005290!9.20e-07!3;UBERON:0010096!9.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;8.93e-24;5!UBERON:0001869;6.09e-18;32!UBERON:0001950;3.38e-16;20!UBERON:0001893;4.46e-16;34!UBERON:0002791;5.78e-15;32!UBERON:0002619;1.02e-14;22!UBERON:0000922;6.29e-14;49!UBERON:0000956;6.30e-13;25!UBERON:0000203;6.30e-13;25!UBERON:0003528;8.05e-13;34!UBERON:0002020;8.05e-13;34!UBERON:0002780;9.28e-11;41!UBERON:0001890;9.28e-11;41!UBERON:0002902;8.13e-09;1!UBERON:0009899;8.13e-09;1!UBERON:0001874;9.44e-09;1!UBERON:0002581;2.12e-08;1!UBERON:0001882;2.12e-08;1!UBERON:0000941;2.12e-08;1!UBERON:0001785;2.12e-08;1!UBERON:0002464;2.12e-08;1!UBERON:0004904;2.12e-08;1!UBERON:0001021;2.12e-08;1!UBERON:0007190;2.12e-08;1!UBERON:0005403;2.12e-08;1!UBERON:0001017;3.58e-08;75!UBERON:0000369;3.66e-08;4!UBERON:0002435;3.66e-08;4!UBERON:0000204;3.66e-08;4!UBERON:0000955;4.11e-08;68!UBERON:0000073;3.20e-07;53!UBERON:0002616;3.20e-07;53!UBERON:0001872;9.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.33e-24,5;UBERON:0001869,2.71e-20,32;UBERON:0001893,4.86e-19,34;UBERON:0001016,4.34e-17,89;UBERON:0001017,8.38e-17,81;UBERON:0002791,1.84e-16,32;UBERON:0001950,3.16e-16,20;UBERON:0002780,1.37e-15,41;UBERON:0001890,1.37e-15,41;UBERON:0003080,1.37e-15,41;UBERON:0006240,1.37e-15,41;UBERON:0003528,1.93e-15,34;UBERON:0002020,1.93e-15,34;UBERON:0002619,9.57e-15,22;UBERON:0000956,5.98e-13,25;UBERON:0000203,5.98e-13,25;UBERON:0000955,8.94e-13,68;UBERON:0006238,8.94e-13,68;UBERON:0003056,3.53e-12,61;UBERON:0000073,9.39e-12,53;UBERON:0002616,9.39e-12,53;UBERON:0001049,4.78e-11,56;UBERON:0005068,4.78e-11,56;UBERON:0006241,4.78e-11,56;UBERON:0007135,4.78e-11,56;UBERON:0004121,5.41e-10,171;UBERON:0000924,5.41e-10,171;UBERON:0006601,5.41e-10,171;UBERON:0002346,8.80e-10,86;UBERON:0002902,8.15e-09,1;UBERON:0009899,8.15e-09,1;UBERON:0001874,1.02e-08,1;UBERON:0003075,1.30e-08,82;UBERON:0007284,1.30e-08,82;UBERON:0001882,1.71e-08,1;UBERON:0005403,1.71e-08,1;UBERON:0000941,1.84e-08,1;UBERON:0001785,1.84e-08,1;UBERON:0002464,1.84e-08,1;UBERON:0004904,1.84e-08,1;UBERON:0001021,1.84e-08,1;UBERON:0003902,1.84e-08,1;UBERON:0005425,1.84e-08,1;UBERON:0007190,1.98e-08,1;UBERON:0002581,2.29e-08,1;UBERON:0000369,3.41e-08,4;UBERON:0002435,3.41e-08,4;UBERON:0000204,3.41e-08,4;UBERON:0010082,3.41e-08,4;UBERON:0011216,7.00e-08,223;UBERON:0001872,9.98e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.132529768321485,0.929551542956147,1.14027160516907,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,2.31986643833309,0.837581326671744,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0.551346289938122,0,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,9.98068990005971,0,0,0,0,0,0,0.344743373241465,0,0.868124974666461,0.885741385813839,0.723578631752448,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0,0,0,0.971992906528395,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.807253238237985,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0,1.86705782949428,0,0,0.558644917973244,0,0,0,0,0,1.47727217721857,0,1.59633859057151,2.87162909937057,7.56215088665154,3.66533438060355,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.41828927698629,0,0.413373593002368,0.887821342714695,6.01672289920042,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.24968269769413,0,0,0,2.19961825882403,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,1.64910775118144,0,0,0,0,0,0,0.785233868459781,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.611923411718232,4.79985759374415,0.5290268405154,0,0,0,0.378499274505237,0.655593431782173,0,0.305966489225945,0,8.73001545581027,0,0,0,0.829169439458779,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SYT6 | |||
}} |
Latest revision as of 06:56, 16 September 2015
Short description: | p2@SYT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYT6_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -13bp_to_ENST00000369547, ENST00000393296, NM_001253772, NR_045589, uc001eev.2_5end |
EntrezGene: | SYT6 |
HGNC: | 18638 |
UniProt: | Q5T7P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.85e-13 | 5 |
neuronal stem cell | 1.03e-08 | 8 |