FFCP PHASE1:Hg19::chr1:234194104..234194106,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:234194104..234194106,+ | |||
|description=CAGE_peak_at_chr1:234194104..234194106,+ | |||
|id=chr1:234194104..234194106,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.14e-24;2!UBERON:0005425;5.06e-13;1 | |||
|ontology_enrichment_disease=DOID:305!4.17e-12!106;DOID:0050687!5.35e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;5.06e-13;1!DOID:3603;5.06e-13;1!DOID:3910;3.81e-07;2!DOID:4468;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.76e-13,1;DOID:3603,3.76e-13,1;DOID:3910,2.74e-07,2;DOID:4468,5.60e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.55e-32!57;UBERON:0005068!3.55e-32!57;UBERON:0006241!3.55e-32!57;UBERON:0007135!3.55e-32!57;UBERON:0001893!2.04e-30!34;UBERON:0002791!5.49e-29!33;UBERON:0002616!8.53e-29!59;UBERON:0002780!2.49e-28!41;UBERON:0001890!2.49e-28!41;UBERON:0006240!2.49e-28!41;UBERON:0001869!3.45e-28!32;UBERON:0002020!6.57e-28!34;UBERON:0003528!6.57e-28!34;UBERON:0000955!1.03e-27!69;UBERON:0006238!1.03e-27!69;UBERON:0003080!1.89e-27!42;UBERON:0001017!7.46e-26!82;UBERON:0005743!2.50e-25!86;UBERON:0003075!7.82e-24!86;UBERON:0007284!7.82e-24!86;UBERON:0000073!3.32e-23!94;UBERON:0001016!3.32e-23!94;UBERON:0002346!3.22e-22!90;UBERON:0003056!3.18e-20!61;UBERON:0000956!1.40e-17!25;UBERON:0000203!1.40e-17!25;UBERON:0000033!1.51e-15!123;UBERON:0007023!1.65e-14!115;UBERON:0000153!2.96e-14!129;UBERON:0007811!2.96e-14!129;UBERON:0004121!1.42e-13!169;UBERON:0002619!1.54e-13!22;UBERON:0000064!2.16e-13!219;UBERON:0009663!4.09e-13!7;UBERON:0001950!5.22e-13!20;UBERON:0000924!6.09e-13!173;UBERON:0006601!6.09e-13!173;UBERON:0002420!1.17e-12!9;UBERON:0007245!1.17e-12!9;UBERON:0010009!1.17e-12!9;UBERON:0010011!1.17e-12!9;UBERON:0000454!1.17e-12!9;UBERON:0002308!2.26e-12!9;UBERON:0000125!2.26e-12!9;UBERON:0000477!5.01e-09!286;UBERON:0000369!6.80e-09!4;UBERON:0002435!6.80e-09!4;UBERON:0000204!6.80e-09!4;UBERON:0010082!6.80e-09!4;UBERON:0001737!1.73e-08!9;UBERON:0000025!3.64e-08!194;UBERON:0004732!1.04e-07!13;UBERON:0000481!2.91e-07!347;UBERON:0005383!3.88e-07!3;UBERON:0005382!3.88e-07!3;UBERON:0004111!7.61e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.48e-47;4!UBERON:0002435;1.48e-47;4!UBERON:0000204;1.48e-47;4!UBERON:0009663;2.51e-42;7!UBERON:0005383;2.33e-36;3!UBERON:0005382;2.33e-36;3!UBERON:0002420;5.94e-33;9!UBERON:0000125;5.94e-33;9!UBERON:0007245;5.94e-33;9!UBERON:0002308;5.94e-33;9!UBERON:0010009;5.94e-33;9!UBERON:0010011;5.94e-33;9!UBERON:0000454;5.94e-33;9!UBERON:0001873;1.14e-24;2!UBERON:0001874;1.61e-13;1!UBERON:0001882;5.06e-13;1!UBERON:0000941;5.06e-13;1!UBERON:0001785;5.06e-13;1!UBERON:0002464;5.06e-13;1!UBERON:0004904;5.06e-13;1!UBERON:0001021;5.06e-13;1!UBERON:0005403;5.06e-13;1!UBERON:0002791;1.09e-12;32!UBERON:0001869;6.01e-12;32!UBERON:0003528;7.11e-12;34!UBERON:0002020;7.11e-12;34!UBERON:0001893;2.36e-09;34!UBERON:0000955;3.13e-08;68!UBERON:0002780;4.34e-08;41!UBERON:0001890;4.34e-08;41!UBERON:0001875;2.35e-07;2!UBERON:0006514;2.35e-07;2!UBERON:0004903;3.81e-07;2!UBERON:0003714;3.81e-07;2!UBERON:0005162;3.81e-07;2!UBERON:0000122;3.81e-07;2!UBERON:0002173;3.81e-07;2!UBERON:0002186;3.81e-07;2!UBERON:0001016;5.98e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.01e-47,4;UBERON:0002435,2.01e-47,4;UBERON:0000204,2.01e-47,4;UBERON:0010082,2.01e-47,4;UBERON:0009663,3.25e-42,7;UBERON:0005383,2.08e-36,3;UBERON:0005382,2.08e-36,3;UBERON:0002420,7.27e-33,9;UBERON:0000125,7.27e-33,9;UBERON:0007245,7.27e-33,9;UBERON:0002308,7.27e-33,9;UBERON:0010009,7.27e-33,9;UBERON:0010011,7.27e-33,9;UBERON:0000454,7.27e-33,9;UBERON:0001873,1.02e-24,2;UBERON:0010122,1.02e-24,2;UBERON:0001874,1.61e-13,1;UBERON:0000941,6.82e-13,1;UBERON:0001785,6.82e-13,1;UBERON:0002464,6.82e-13,1;UBERON:0004904,6.82e-13,1;UBERON:0001021,6.82e-13,1;UBERON:0003902,6.82e-13,1;UBERON:0005425,6.82e-13,1;UBERON:0001882,7.68e-13,1;UBERON:0005403,7.68e-13,1;UBERON:0002791,1.53e-12,32;UBERON:0001869,1.53e-12,32;UBERON:0003528,8.34e-12,34;UBERON:0002020,8.34e-12,34;UBERON:0001893,8.34e-12,34;UBERON:0000073,4.42e-10,53;UBERON:0002616,4.42e-10,53;UBERON:0000955,6.14e-10,68;UBERON:0006238,6.14e-10,68;UBERON:0002780,8.89e-10,41;UBERON:0001890,8.89e-10,41;UBERON:0003080,8.89e-10,41;UBERON:0006240,8.89e-10,41;UBERON:0001049,1.62e-09,56;UBERON:0005068,1.62e-09,56;UBERON:0006241,1.62e-09,56;UBERON:0007135,1.62e-09,56;UBERON:0001016,2.75e-09,89;UBERON:0003056,1.09e-08,61;UBERON:0001017,3.04e-08,81;UBERON:0003075,3.35e-08,82;UBERON:0007284,3.35e-08,82;UBERON:0002346,8.77e-08,86;UBERON:0001875,2.43e-07,2;UBERON:0006514,2.43e-07,2;UBERON:0004903,2.74e-07,2;UBERON:0002173,2.74e-07,2;UBERON:0002186,2.74e-07,2;UBERON:0003714,4.42e-07,2;UBERON:0005162,4.42e-07,2;UBERON:0000122,4.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.958120975510189,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,1.09493207722749,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.55146986366197,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,1.98895302764489,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,1.97710372524119,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0.227586896570999,0,0.472775363535873,0,0,0.347249989866585,2.65722415744152,1.5677537021303,1.52581736317083,0.442317039724898,0.886642856860642,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0.822251547880505,0.397429223405979,0.379864775735272,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.621262677827163,0,0,0,0,0,2.40168115483916,0.273810757783986,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.485996453264197,0,0,0,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.310482014706917,0.553394539744923,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,1.90180911022764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,0,0.319267718114302,0.41023272848151,1.26035848110859,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0.405225507710368,0,0.206686796501184,0.697573912132975,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.475788130837822,0.526182188502793,0.236387681767936,0.222462803784138,0,3.14231179832004,0,1.82631744101899,0.431855182437243,1.43325506366115,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0,0,0,0,0.672791175483681,0,0.202117188958219,0,0,0,0,0,0.244209805832924,0,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr1:234194104..234194106,+ | |||
}} |
Latest revision as of 05:08, 28 July 2015
Short description: | p@chr1:234194104..234194106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:234194104..234194106, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.76e-13 | 1 |
mucinous cystadenocarcinoma | 3.76e-13 | 1 |
lung adenocarcinoma | 2.74e-07 | 2 |
clear cell adenocarcinoma | 5.60e-07 | 2 |