FFCP PHASE1:Hg19::chr2:198669365..198669376,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5334 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9063 | |||
|TSSclassifier=strong | |||
|UniProt=Q15111,F8WAR2 | |||
|association_with_transcript=-49bp_to_ENST00000428675,ENST00000435320,NM_006226,uc002uuv.3,uc010fsp.2_5end | |||
|cluster_id=chr2:198669365..198669376,+ | |||
|coexpression_cluster_id=C4168 | |||
|description=CAGE_peak_3_at_PLCL1_5end | |||
|id=chr2:198669365..198669376,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.93e-10!18;CL:0000789!4.93e-10!18;CL:0002420!4.93e-10!18;CL:0002419!4.93e-10!18;CL:0000790!4.93e-10!18;CL:0000738!1.86e-09!140;CL:0000084!5.70e-08!25;CL:0000827!5.70e-08!25;CL:0000037!2.16e-07!172;CL:0000566!2.16e-07!172;CL:0000625!9.36e-07!11;CL:0002032!9.86e-07!165;CL:0000837!9.86e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.64e-14;18!CL:0000789;3.64e-14;18!CL:0002419;3.64e-14;18!CL:0000084;8.78e-12;25!CL:0000624;7.07e-09;6!CL:0000625;2.10e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-14,18;CL:0000789,3.08e-14,18;CL:0002420,3.08e-14,18;CL:0002419,3.08e-14,18;CL:0000790,3.08e-14,18;CL:0000084,8.66e-12,25;CL:0000827,8.66e-12,25;CL:0000624,7.68e-09,6;CL:0000625,1.69e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-14;18!UBERON:0006601;1.16e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.68e-41!115;UBERON:0001049!7.31e-29!57;UBERON:0005068!7.31e-29!57;UBERON:0006241!7.31e-29!57;UBERON:0007135!7.31e-29!57;UBERON:0002616!2.18e-24!59;UBERON:0003080!2.61e-23!42;UBERON:0002780!1.20e-22!41;UBERON:0001890!1.20e-22!41;UBERON:0006240!1.20e-22!41;UBERON:0002020!1.35e-21!34;UBERON:0003528!1.35e-21!34;UBERON:0001893!2.18e-21!34;UBERON:0002791!1.09e-20!33;UBERON:0001017!1.38e-20!82;UBERON:0001869!2.19e-20!32;UBERON:0000955!2.63e-20!69;UBERON:0006238!2.63e-20!69;UBERON:0005743!2.57e-19!86;UBERON:0000073!2.92e-17!94;UBERON:0001016!2.92e-17!94;UBERON:0003075!4.79e-17!86;UBERON:0007284!4.79e-17!86;UBERON:0002619!1.24e-16!22;UBERON:0000956!3.66e-16!25;UBERON:0000203!3.66e-16!25;UBERON:0001950!1.58e-15!20;UBERON:0002346!3.43e-15!90;UBERON:0003056!1.90e-13!61;UBERON:0000153!7.08e-10!129;UBERON:0007811!7.08e-10!129;UBERON:0000033!1.57e-08!123;UBERON:0000025!1.81e-07!194;UBERON:0002308!6.86e-07!9;UBERON:0000125!6.86e-07!9;UBERON:0002420!7.71e-07!9;UBERON:0007245!7.71e-07!9;UBERON:0010009!7.71e-07!9;UBERON:0010011!7.71e-07!9;UBERON:0000454!7.71e-07!9;UBERON:0003076!7.81e-07!15;UBERON:0003057!7.81e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.74e-26;34!UBERON:0002020;3.74e-26;34!UBERON:0002619;4.08e-26;22!UBERON:0001869;5.93e-26;32!UBERON:0001893;9.89e-26;34!UBERON:0002791;1.19e-25;32!UBERON:0001950;2.99e-24;20!UBERON:0002780;5.89e-24;41!UBERON:0001890;5.89e-24;41!UBERON:0000956;3.94e-22;25!UBERON:0000203;3.94e-22;25!UBERON:0000073;3.77e-21;53!UBERON:0002616;3.77e-21;53!UBERON:0000955;3.31e-14;68!UBERON:0001017;3.99e-13;75!UBERON:0007023;3.06e-11;114!UBERON:0001016;4.09e-11;83!UBERON:0000125;3.58e-10;9!UBERON:0002308;3.58e-10;9!UBERON:0002420;3.98e-10;9!UBERON:0007245;3.98e-10;9!UBERON:0010009;3.98e-10;9!UBERON:0010011;3.98e-10;9!UBERON:0000454;3.98e-10;9!UBERON:0001871;1.65e-08;6!UBERON:0000200;2.88e-08;6!UBERON:0004732;5.92e-08;13!UBERON:0009663;7.11e-08;7!UBERON:0002021;1.10e-07;5!UBERON:0002298;2.57e-07;6!UBERON:0001872;5.63e-07;5!UBERON:0004733;8.02e-07;12!UBERON:0002028;8.02e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.80e-40,56;UBERON:0005068,3.80e-40,56;UBERON:0006241,3.80e-40,56;UBERON:0007135,3.80e-40,56;UBERON:0000073,6.19e-39,53;UBERON:0002616,6.19e-39,53;UBERON:0007023,4.10e-37,114;UBERON:0002780,8.06e-34,41;UBERON:0001890,8.06e-34,41;UBERON:0003080,8.06e-34,41;UBERON:0006240,8.06e-34,41;UBERON:0003528,5.22e-31,34;UBERON:0002020,5.22e-31,34;UBERON:0000955,7.46e-31,68;UBERON:0006238,7.46e-31,68;UBERON:0001893,1.10e-30,34;UBERON:0001017,6.54e-30,81;UBERON:0001869,4.86e-29,32;UBERON:0002791,1.10e-28,32;UBERON:0001016,1.11e-26,89;UBERON:0002619,3.56e-26,22;UBERON:0003075,4.89e-26,82;UBERON:0007284,4.89e-26,82;UBERON:0001950,2.28e-24,20;UBERON:0002346,4.78e-24,86;UBERON:0000956,3.50e-22,25;UBERON:0000203,3.50e-22,25;UBERON:0003056,2.38e-21,61;UBERON:0010314,3.05e-18,132;UBERON:0010371,6.07e-18,104;UBERON:0000025,1.87e-10,192;UBERON:0000125,2.87e-10,9;UBERON:0002308,2.87e-10,9;UBERON:0002420,3.47e-10,9;UBERON:0007245,3.47e-10,9;UBERON:0010009,3.47e-10,9;UBERON:0010011,3.47e-10,9;UBERON:0000454,3.47e-10,9;UBERON:0004121,3.08e-09,171;UBERON:0000924,3.08e-09,171;UBERON:0006601,3.08e-09,171;UBERON:0001871,1.43e-08,6;UBERON:0000200,2.27e-08,6;UBERON:0011216,3.64e-08,223;UBERON:0009663,5.59e-08,7;UBERON:0003076,7.57e-08,15;UBERON:0003057,7.57e-08,15;UBERON:0004732,8.60e-08,13;UBERON:0002021,1.22e-07,5;UBERON:0002298,3.15e-07,6;UBERON:0001872,4.68e-07,5 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0.136874425072884,0.125542639594803,0.382067028739756,0.164201178899891,0.393553906568396,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0,1.66198622559563,3.40925560699241,3.47217393145363,0.895661896959697,1.29557466407592,2.31818010870768,0.290796477559129,0.755751887377619,0.727752183563449,0.464858073811369,1.6446715520873,0.309706370895104,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,1.86846674698672,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0.112328631146495,0.450530678524519,0.16072558669708,0,0.59675003159727,0.730656615058536,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0.560508562981536,0,11.80258620683,11.3973121197258,8.63526295797939,4.84840836632966,9.12582346574053,8.04861269749047,19.4826728407911,0.891283655081389,9.72199494666963,7.08908462667588,8.12411591295047,4.99556146930133,4.03183977435623,2.63100647365882,0.552700035571697,2.02862160014537,10.2317728581822,12.0393372640371,16.7256838087963,0.113309342697566,2.29932296161153,3.09264700934367,2.02415753615602,1.91139248594458,1.95325036156926,0.950452044448374,3.76437797694432,1.53583933385302,1.24930726552346,2.13099526839615,1.64225599384209,4.63695509416885,4.27904313253612,5.35850294366356,2.43806866313962,1.34140171940727,0.639312809217652,0,0,0,0,0,0,0.443458794925128,0.175669571386252,1.17881167947941,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,1.67799774483962,1.6507082516404,0.835979866147242,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.898117490504679,0.337834441449967,0,0.949265659568129,1.28241220751285,0,3.87780264148325,0,0,0.759783069987479,0,0.860509862246441,0.354668382198357,1.12135520028461,0,0,2.17847724779836,1.0776853765575,2.7788523529288,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,5.29755719297581,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,1.40402559083543,1.78357394746474,0,0,0,0,0,0,0,0.176096868026452,8.70778085271243,6.91775776401415,9.4681825069785,0.126995788584338,0,0,0,0,0,0.571652865261156,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0.179060963239896,0,4.3346767244424,7.11570997036407,4.62034930607094,0,1.30139853857622,0,0.502548796003046,1.91381625495949,1.49801404789436,5.9832291840805,2.90090859405225,0,0,0,0.623912584592421,0.713715955188647,0.157702415033935,0,0.601892199455438,0,0,1.32845119707087,0,0.0868836144680828,0,0,3.51505644408909,4.74571241800957,5.33637789017222,0,0,0,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,1.73981983154852,0.330037999682352,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,1.54016790088044,0,0,0.18532421910392,1.28812398067792,0,0.316379424718726,0,0,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0.92947049429925,0.845086807596724,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,2.85878130549347,1.64544909234478,0,0,0.79312517629427,0,0,0,0,0,8.39473751511287,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,2.46174797895425,0,0,0,0,0.439524537815682,0,0,0,0,0,0,6.95903353436409,4.07941307590487,0.222617410045812,0,0,3.18796781201712,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.690503839458535,4.7896618469388,0,5.81599647657131,4.08179631912146,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0,0,6.20018970069687,2.53252521113357,3.05163472634166,2.32216445855572,2.06883333267483,3.51016635446356,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0.0915975934018623,0,2.04386596391473,0,1.16348177330109,0.451191321234361,2.15668787749514,3.18861015254101,0.569261198172555,1.11255605286265,0,0,0,0.432777279484182,2.98578579323551,0.530745387020035,1.22206028986725,0,0.123563938946503,0,2.76344645220776,0.802577647298789,4.2167600230561,0,0,0,0.789168805698781,2.41981432097328,2.44858209304392,0.695052375913368,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0.0730893170861856,0,0.387956065953678,0,0.677942222341597,0,0,4.17851253308799,0,0,0.640358984218058,0,0,0,3.08870996151536,0,0,0,0,0,0,0,6.60462317580768,2.60120219894787,0,0.429765441419957,0,0.558564802544508,2.29160424011684,0,3.39454300848285,3.86303443322914,3.79391477651183,2.41860500952215,0,0,0,0,0,0,0,4.77137813885582,2.04305109167363,0,0,0,2.0247650239635,0.77380195455795,2.73373004961111,0,2.04894838977915,0.734364233889974,0,0,0,2.85878130549347,12.5797474369432,0,0.542999601753713,0,0,0,4.92555124496034,0,0,0,0,8.14482625077768,4.49590845925146,0,0,0.961086713109252,0.157204305099666,2.89967338743037,4.46549419630756,0,0,0,0,0.5013797880454,0,0,0,9.74674997963685,4.75902433117656,6.63511932744449,2.29363678276028,2.3295100822739,2.54595252059672,0,0,0.758245587708239,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.706756583783524,0,0,0,0,0,4.56252839300712,0.584580926518165,0.531459361253452,0.981392365535065,0,0,0,0.19998739585493,0,1.03328987796489,0,0,0,0,0.76736622782191,0,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,2.44071055366546,9.91876034279095,5.10828348982884,10.050701847797,12.6035848110859,3.18123361335402,4.19836678642813,12.8492478233239,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,4.79516850790602,8.59185908475232,4.96048311602842,3.23420631988925,5.4697480901822,0,1.98484471355718,0,0,16.0710550763486,9.41594422212707,0,0,0.354809480650555,0.345701962667338,0,4.0781839786099,3.55172977239385,0,0,0.627944742804112,2.82808061848803,0,3.65263488203798,0,0,1.6439605160631,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,1.72090943528111,0,0,0,0,0,0,0,0,0,0.647428837187895,0.718639647993729,2.3196288626764,1.94284397223656,2.33939463462106,3.18321240258189,0,0,0.109940516745429,3.77407108916684,0.771741581079447,0.437119121007915,2.35158648180761,1.47088993052343,0.942706188406504,8.2449556188277,3.56455680392503,0.8453114551668,0,0.939839179798536,0.45120521581504,0,0,0,0,4.3820183294791,0.917458566809082,2.29343333042322,0,3.80752345069122,2.61810414204226,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0,0,0,0,0,0.530450887527676,0.267964130156178,4.97501663675268,1.65492793379032,0.426467963801962,3.09483760902862,8.20279154917278,12.4770175734674,0.112131862580613,0.509177266225319,0.808468755832877,0.870866991587845,1.36893320434112,1.0776328482334,0.286888821570705,1.33064142618405,0.162806537221949,0.426909383510862,0,0,0,0.611207220914332,4.47585796147312,0.665756774185513,3.22038069745642,0.320568492303233 | |||
|short_description=p3@PLCL1 | |||
}} |
Latest revision as of 08:40, 19 September 2015
Short description: | p3@PLCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLCL1_5end |
Coexpression cluster: | C4168_optic_substantia_spinal_left_pineal_globus_thalamus |
Association with transcript: | -49bp_to_ENST00000428675, ENST00000435320, NM_006226, uc002uuv.3, uc010fsp.2_5end |
EntrezGene: | PLCL1 |
HGNC: | 9063 |
UniProt: | Q15111F8WAR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.08e-14 | 18 |
alpha-beta T cell | 3.08e-14 | 18 |
immature T cell | 3.08e-14 | 18 |
mature T cell | 3.08e-14 | 18 |
immature alpha-beta T cell | 3.08e-14 | 18 |
T cell | 8.66e-12 | 25 |
pro-T cell | 8.66e-12 | 25 |
CD4-positive, alpha-beta T cell | 7.68e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.69e-08 | 11 |