FFCP PHASE1:Mm9::chr12:106575405..106575435,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=159|UniProt=|association_with_transcript=0bp_to_uc007oyh.1_5end|description=CAGE_peak_1_at_uc007oyh.1_5end|id=chr12:106575405..106575435,+|ontology_enrichment_celltype=CL:0000117!2.15e-19!23;CL:0000337!2.15e-19!23;CL:0000540!7.56e-13!33;CL:0000047!7.56e-13!33;CL:0000031!7.56e-13!33;CL:0000404!7.56e-13!33;CL:0000393!5.00e-10!39;CL:0000211!5.00e-10!39;CL:0000221!4.03e-08!44;CL:0000133!4.03e-08!44;CL:0002319!1.12e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.82e-31,23;CL:0000337,3.82e-31,23;CL:0000540,4.84e-22,33;CL:0000047,4.84e-22,33;CL:0000031,4.84e-22,33;CL:0000404,4.84e-22,33;CL:0000393,1.06e-17,39;CL:0000211,1.06e-17,39;CL:0002319,1.72e-15,43;CL:0000221,5.29e-15,44;CL:0000133,5.29e-15,44;CL:0002321,2.60e-07,70;CL:0002612,5.08e-07,3;CL:0002610,6.90e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.73e-26!52;UBERON:0005068!4.73e-26!52;UBERON:0006241!4.73e-26!52;UBERON:0007135!4.73e-26!52;UBERON:0000033!1.19e-25!63;UBERON:0002346!1.54e-25!71;UBERON:0003075!1.54e-25!71;UBERON:0007284!1.54e-25!71;UBERON:0001017!1.49e-24!73;UBERON:0005743!1.49e-24!73;UBERON:0000955!5.51e-24!50;UBERON:0006238!5.51e-24!50;UBERON:0000073!2.54e-23!75;UBERON:0001016!2.54e-23!75;UBERON:0002616!3.61e-23!49;UBERON:0004121!1.81e-21!102;UBERON:0000924!1.81e-21!102;UBERON:0006601!1.81e-21!102;UBERON:0003056!4.19e-20!49;UBERON:0002020!4.71e-20!34;UBERON:0003080!1.63e-18!40;UBERON:0002780!1.34e-17!39;UBERON:0001890!1.34e-17!39;UBERON:0006240!1.34e-17!39;UBERON:0002791!1.93e-15!29;UBERON:0003528!1.93e-15!29;UBERON:0001893!1.93e-15!29;UBERON:0007811!3.11e-14!86;UBERON:0000153!1.23e-12!94;UBERON:0000956!2.05e-09!21;UBERON:0001869!2.05e-09!21;UBERON:0000203!2.05e-09!21;UBERON:0003076!4.15e-08!12;UBERON:0003057!4.15e-08!12;UBERON:0002420!1.11e-07!8;UBERON:0007245!1.11e-07!8;UBERON:0010009!1.11e-07!8;UBERON:0010011!1.11e-07!8;UBERON:0000454!1.11e-07!8;UBERON:0002619!2.45e-07!17;UBERON:0002240!4.69e-07!6;UBERON:0005174!4.69e-07!6;UBERON:0001137!4.69e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.03e-36,54;UBERON:0001017,1.14e-35,73;UBERON:0001016,1.94e-34,75;UBERON:0001049,8.98e-33,52;UBERON:0005068,8.98e-33,52;UBERON:0006241,8.98e-33,52;UBERON:0007135,8.98e-33,52;UBERON:0002020,7.09e-29,34;UBERON:0002346,2.07e-28,64;UBERON:0003075,2.07e-28,64;UBERON:0007284,2.07e-28,64;UBERON:0004121,5.72e-28,95;UBERON:0000924,5.72e-28,95;UBERON:0006601,5.72e-28,95;UBERON:0010371,2.07e-25,73;UBERON:0000955,1.28e-24,47;UBERON:0006238,1.28e-24,47;UBERON:0002616,2.69e-23,46;UBERON:0003528,1.41e-20,29;UBERON:0002791,1.41e-20,29;UBERON:0001893,1.41e-20,29;UBERON:0003080,5.87e-19,40;UBERON:0010314,3.50e-18,92;UBERON:0002780,1.61e-17,39;UBERON:0001890,1.61e-17,39;UBERON:0006240,1.61e-17,39;UBERON:0003056,2.97e-17,49;UBERON:0003076,1.90e-15,12;UBERON:0003057,1.90e-15,12;UBERON:0002420,1.72e-13,8;UBERON:0007245,1.72e-13,8;UBERON:0010009,1.72e-13,8;UBERON:0010011,1.72e-13,8;UBERON:0000454,1.72e-13,8;UBERON:0002240,2.83e-12,6;UBERON:0005174,2.83e-12,6;UBERON:0001137,2.83e-12,6;UBERON:0001948,1.62e-10,5;UBERON:0002315,1.62e-10,5;UBERON:0000956,3.82e-10,21;UBERON:0001869,3.82e-10,21;UBERON:0000203,3.82e-10,21;UBERON:0000025,4.09e-10,114;UBERON:0004111,1.02e-09,122;UBERON:0002619,2.01e-09,17;UBERON:0000369,1.28e-08,5;UBERON:0002435,1.28e-08,5;UBERON:0000204,1.28e-08,5;UBERON:0010082,1.28e-08,5;UBERON:0002950,2.69e-08,4;UBERON:0001891,2.69e-08,4;UBERON:0009616,2.69e-08,4;UBERON:0010286,2.69e-08,4;UBERON:0002257,5.08e-07,3;UBERON:0002021,5.61e-07,10;UBERON:0000411,5.61e-07,10;UBERON:0001950,5.61e-07,10;UBERON:0011216,6.43e-07,194;UBERON:0004684,6.90e-07,3;UBERON:0002275,6.90e-07,3|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.933206510776299,0.675029691658453,1.05162480675691,7.9982275633065,8.39300455616131,1.83736198822431,1.82106394934649,3.67687514644008,6.60695285996332,9.57655035638908,8.44835932909339,1.31886287730194,4.39140689291566,1.56274011167028,8.09630697104005,4.50210088025344,5.65353516774197,11.7851434189467,9.681274294339,6.71038004971082,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,7.02673912827713,9.21565509979202,0,0,0,0,9.43681028250383,2.28750301409313,11.8115090986093,1.73824320192276,2.81287003063364,7.48036960414416,5.51620294430376,0.101839363850316,0,0,1.26265113531884,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.512454881139399,0.937017245597288,3.10444044886819,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.720332286654991,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,6.21221938938677,0,0,0.315508219416257,0,0,0,0,0,0,0,0,3.21321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0.658196082408484,0.913394847343798,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.258319646955462,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,1.61484941897056,0.335769232728157,0,0,0,0,0,2.82375921308533,2.30162618253588,1.71868654031819,2.23409137046794,1.37016503954128,2.2661816921691,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0.798049746802062,0.512200817262403,0.729320151204882,0.838452650511929,1.2869045591501,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.576226371643824,0.861532034334199,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,1.17759136107518,0.685738504770831,0,0.715308569841963,1.0174249164263,0.941093804153306,0.676916863133412,0.365855945745545,0,0.950628796921032,1.68342681497322,0.237270036248348,0.985044823755635,1.63692417267876,0.309873682371932,0.578719832943424,1.49886346762768,0.701794825336225,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p1@uc007oyh.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007oyh.1_5end | |||
|cluster_id=chr12:106575405..106575435,+ | |||
|description=CAGE_peak_1_at_uc007oyh.1_5end | |||
|id=chr12:106575405..106575435,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.15e-19!23;CL:0000337!2.15e-19!23;CL:0000540!7.56e-13!33;CL:0000047!7.56e-13!33;CL:0000031!7.56e-13!33;CL:0000404!7.56e-13!33;CL:0000393!5.00e-10!39;CL:0000211!5.00e-10!39;CL:0000221!4.03e-08!44;CL:0000133!4.03e-08!44;CL:0002319!1.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.82e-31,23;CL:0000337,3.82e-31,23;CL:0000540,4.84e-22,33;CL:0000047,4.84e-22,33;CL:0000031,4.84e-22,33;CL:0000404,4.84e-22,33;CL:0000393,1.06e-17,39;CL:0000211,1.06e-17,39;CL:0002319,1.72e-15,43;CL:0000221,5.29e-15,44;CL:0000133,5.29e-15,44;CL:0002321,2.60e-07,70;CL:0002612,5.08e-07,3;CL:0002610,6.90e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.73e-26!52;UBERON:0005068!4.73e-26!52;UBERON:0006241!4.73e-26!52;UBERON:0007135!4.73e-26!52;UBERON:0000033!1.19e-25!63;UBERON:0002346!1.54e-25!71;UBERON:0003075!1.54e-25!71;UBERON:0007284!1.54e-25!71;UBERON:0001017!1.49e-24!73;UBERON:0005743!1.49e-24!73;UBERON:0000955!5.51e-24!50;UBERON:0006238!5.51e-24!50;UBERON:0000073!2.54e-23!75;UBERON:0001016!2.54e-23!75;UBERON:0002616!3.61e-23!49;UBERON:0004121!1.81e-21!102;UBERON:0000924!1.81e-21!102;UBERON:0006601!1.81e-21!102;UBERON:0003056!4.19e-20!49;UBERON:0002020!4.71e-20!34;UBERON:0003080!1.63e-18!40;UBERON:0002780!1.34e-17!39;UBERON:0001890!1.34e-17!39;UBERON:0006240!1.34e-17!39;UBERON:0002791!1.93e-15!29;UBERON:0003528!1.93e-15!29;UBERON:0001893!1.93e-15!29;UBERON:0007811!3.11e-14!86;UBERON:0000153!1.23e-12!94;UBERON:0000956!2.05e-09!21;UBERON:0001869!2.05e-09!21;UBERON:0000203!2.05e-09!21;UBERON:0003076!4.15e-08!12;UBERON:0003057!4.15e-08!12;UBERON:0002420!1.11e-07!8;UBERON:0007245!1.11e-07!8;UBERON:0010009!1.11e-07!8;UBERON:0010011!1.11e-07!8;UBERON:0000454!1.11e-07!8;UBERON:0002619!2.45e-07!17;UBERON:0002240!4.69e-07!6;UBERON:0005174!4.69e-07!6;UBERON:0001137!4.69e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.03e-36,54;UBERON:0001017,1.14e-35,73;UBERON:0001016,1.94e-34,75;UBERON:0001049,8.98e-33,52;UBERON:0005068,8.98e-33,52;UBERON:0006241,8.98e-33,52;UBERON:0007135,8.98e-33,52;UBERON:0002020,7.09e-29,34;UBERON:0002346,2.07e-28,64;UBERON:0003075,2.07e-28,64;UBERON:0007284,2.07e-28,64;UBERON:0004121,5.72e-28,95;UBERON:0000924,5.72e-28,95;UBERON:0006601,5.72e-28,95;UBERON:0010371,2.07e-25,73;UBERON:0000955,1.28e-24,47;UBERON:0006238,1.28e-24,47;UBERON:0002616,2.69e-23,46;UBERON:0003528,1.41e-20,29;UBERON:0002791,1.41e-20,29;UBERON:0001893,1.41e-20,29;UBERON:0003080,5.87e-19,40;UBERON:0010314,3.50e-18,92;UBERON:0002780,1.61e-17,39;UBERON:0001890,1.61e-17,39;UBERON:0006240,1.61e-17,39;UBERON:0003056,2.97e-17,49;UBERON:0003076,1.90e-15,12;UBERON:0003057,1.90e-15,12;UBERON:0002420,1.72e-13,8;UBERON:0007245,1.72e-13,8;UBERON:0010009,1.72e-13,8;UBERON:0010011,1.72e-13,8;UBERON:0000454,1.72e-13,8;UBERON:0002240,2.83e-12,6;UBERON:0005174,2.83e-12,6;UBERON:0001137,2.83e-12,6;UBERON:0001948,1.62e-10,5;UBERON:0002315,1.62e-10,5;UBERON:0000956,3.82e-10,21;UBERON:0001869,3.82e-10,21;UBERON:0000203,3.82e-10,21;UBERON:0000025,4.09e-10,114;UBERON:0004111,1.02e-09,122;UBERON:0002619,2.01e-09,17;UBERON:0000369,1.28e-08,5;UBERON:0002435,1.28e-08,5;UBERON:0000204,1.28e-08,5;UBERON:0010082,1.28e-08,5;UBERON:0002950,2.69e-08,4;UBERON:0001891,2.69e-08,4;UBERON:0009616,2.69e-08,4;UBERON:0010286,2.69e-08,4;UBERON:0002257,5.08e-07,3;UBERON:0002021,5.61e-07,10;UBERON:0000411,5.61e-07,10;UBERON:0001950,5.61e-07,10;UBERON:0011216,6.43e-07,194;UBERON:0004684,6.90e-07,3;UBERON:0002275,6.90e-07,3 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.933206510776299,0.675029691658453,1.05162480675691,7.9982275633065,8.39300455616131,1.83736198822431,1.82106394934649,3.67687514644008,6.60695285996332,9.57655035638908,8.44835932909339,1.31886287730194,4.39140689291566,1.56274011167028,8.09630697104005,4.50210088025344,5.65353516774197,11.7851434189467,9.681274294339,6.71038004971082,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,7.02673912827713,9.21565509979202,0,0,0,0,9.43681028250383,2.28750301409313,11.8115090986093,1.73824320192276,2.81287003063364,7.48036960414416,5.51620294430376,0.101839363850316,0,0,1.26265113531884,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.512454881139399,0.937017245597288,3.10444044886819,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0.720332286654991,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,6.21221938938677,0,0,0.315508219416257,0,0,0,0,0,0,0,0,3.21321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.356737635204141,0.658196082408484,0.913394847343798,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.258319646955462,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,1.61484941897056,0.335769232728157,0,0,0,0,0,2.82375921308533,2.30162618253588,1.71868654031819,2.23409137046794,1.37016503954128,2.2661816921691,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0.798049746802062,0.512200817262403,0.729320151204882,0.838452650511929,1.2869045591501,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.576226371643824,0.861532034334199,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,1.17759136107518,0.685738504770831,0,0.715308569841963,1.0174249164263,0.941093804153306,0.676916863133412,0.365855945745545,0,0.950628796921032,1.68342681497322,0.237270036248348,0.985044823755635,1.63692417267876,0.309873682371932,0.578719832943424,1.49886346762768,0.701794825336225,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@uc007oyh.1 | |||
}} |
Latest revision as of 15:44, 4 August 2015
Short description: | p1@uc007oyh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007oyh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_uc007oyh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.82e-31 | 23 |
neuroblast (sensu Vertebrata) | 3.82e-31 | 23 |
neuron | 4.84e-22 | 33 |
neuronal stem cell | 4.84e-22 | 33 |
neuroblast | 4.84e-22 | 33 |
electrically signaling cell | 4.84e-22 | 33 |
electrically responsive cell | 1.06e-17 | 39 |
electrically active cell | 1.06e-17 | 39 |
neural cell | 1.72e-15 | 43 |
ectodermal cell | 5.29e-15 | 44 |
neurectodermal cell | 5.29e-15 | 44 |
embryonic cell | 2.60e-07 | 70 |
neuron of the ventral spinal cord | 5.08e-07 | 3 |
raphe nuclei neuron | 6.90e-07 | 3 |