FFCP PHASE1:Hg19::chr4:159094194..159094216,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25312 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UWH4,Q9NYZ0 | |||
|association_with_transcript=0bp_to_ENST00000337222,ENST00000393807,ENST00000417442,NM_001031700,NM_001128424,uc003ipq.3,uc003ipr.3,uc003ips.2_5end | |||
|cluster_id=chr4:159094194..159094216,- | |||
|description=CAGE_peak_5_at_FAM198B_5end | |||
|id=chr4:159094194..159094216,- | |||
|ontology_enrichment_celltype=CL:0002194!2.14e-15!63;CL:0000576!2.14e-15!63;CL:0000040!2.14e-15!63;CL:0000559!2.14e-15!63;CL:0002009!7.88e-15!65;CL:0002057!7.52e-14!42;CL:0000557!8.89e-13!71;CL:0000839!1.03e-12!70;CL:0000766!5.57e-12!76;CL:0000860!9.96e-12!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.21e-14;39!CL:0000234;1.21e-14;39!CL:0000860;2.88e-12;33!CL:0002057;2.88e-12;33!CL:0000576;4.41e-11;48!CL:0000766;5.67e-08;69!CL:0000235;4.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.75e-21,59;CL:0000576,2.75e-21,59;CL:0000040,2.75e-21,59;CL:0000559,2.75e-21,59;CL:0000473,6.46e-21,48;CL:0000234,6.46e-21,48;CL:0002009,5.37e-20,61;CL:0000839,3.82e-17,66;CL:0000557,1.25e-16,67;CL:0000766,1.28e-16,72;CL:0000860,5.36e-16,42;CL:0002057,5.36e-16,42;CL:0000235,4.40e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-12;42!UBERON:0006601;6.50e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-37!115;UBERON:0000468!2.19e-18!659;UBERON:0000467!1.32e-17!625;UBERON:0000480!2.23e-17!626;UBERON:0000922!1.03e-15!612;UBERON:0002050!2.50e-15!605;UBERON:0005423!2.50e-15!605;UBERON:0000923!6.63e-15!604;UBERON:0005291!6.63e-15!604;UBERON:0006598!6.63e-15!604;UBERON:0002532!6.63e-15!604;UBERON:0001049!1.64e-14!57;UBERON:0005068!1.64e-14!57;UBERON:0006241!1.64e-14!57;UBERON:0007135!1.64e-14!57;UBERON:0000062!1.78e-14!511;UBERON:0000955!1.40e-12!69;UBERON:0006238!1.40e-12!69;UBERON:0002616!1.80e-12!59;UBERON:0003081!3.04e-12!216;UBERON:0003080!1.28e-11!42;UBERON:0002405!1.85e-11!115;UBERON:0002193!2.49e-11!112;UBERON:0002780!3.72e-11!41;UBERON:0001890!3.72e-11!41;UBERON:0006240!3.72e-11!41;UBERON:0001017!5.98e-11!82;UBERON:0002371!6.10e-11!80;UBERON:0002390!1.61e-10!102;UBERON:0003061!1.61e-10!102;UBERON:0005743!1.88e-10!86;UBERON:0001893!2.12e-10!34;UBERON:0002020!2.48e-10!34;UBERON:0003528!2.48e-10!34;UBERON:0004111!2.76e-10!241;UBERON:0002791!4.36e-10!33;UBERON:0001869!2.50e-09!32;UBERON:0001474!2.68e-09!86;UBERON:0000025!5.86e-09!194;UBERON:0002619!1.20e-08!22;UBERON:0003075!1.38e-08!86;UBERON:0007284!1.38e-08!86;UBERON:0000073!2.18e-08!94;UBERON:0001016!2.18e-08!94;UBERON:0000926!4.13e-08!448;UBERON:0004120!4.13e-08!448;UBERON:0006603!4.13e-08!448;UBERON:0002346!5.60e-08!90;UBERON:0001950!1.55e-07!20;UBERON:0000479!2.10e-07!787;UBERON:0004765!5.76e-07!101;UBERON:0001434!5.76e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.88e-12;114!UBERON:0001893;1.20e-11;34!UBERON:0003528;1.73e-11;34!UBERON:0002020;1.73e-11;34!UBERON:0002791;2.78e-11;32!UBERON:0001869;4.48e-11;32!UBERON:0002780;1.03e-10;41!UBERON:0001890;1.03e-10;41!UBERON:0002619;1.49e-10;22!UBERON:0000073;1.49e-09;53!UBERON:0002616;1.49e-09;53!UBERON:0001950;4.02e-09;20!UBERON:0000956;1.55e-08;25!UBERON:0000203;1.55e-08;25!UBERON:0001017;1.67e-07;75!UBERON:0000955;2.54e-07;68!UBERON:0000125;8.10e-07;9!UBERON:0002308;8.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-48,114;UBERON:0001049,8.71e-19,56;UBERON:0005068,8.71e-19,56;UBERON:0006241,8.71e-19,56;UBERON:0007135,8.71e-19,56;UBERON:0002050,5.20e-17,564;UBERON:0000923,5.66e-17,560;UBERON:0010316,5.66e-17,560;UBERON:0005291,5.66e-17,560;UBERON:0006598,5.66e-17,560;UBERON:0010317,5.66e-17,560;UBERON:0002532,5.66e-17,560;UBERON:0000073,1.01e-16,53;UBERON:0002616,1.01e-16,53;UBERON:0005423,6.88e-16,581;UBERON:0000922,2.62e-15,592;UBERON:0000955,2.66e-15,68;UBERON:0006238,2.66e-15,68;UBERON:0001017,1.55e-14,81;UBERON:0002780,2.27e-14,41;UBERON:0001890,2.27e-14,41;UBERON:0003080,2.27e-14,41;UBERON:0006240,2.27e-14,41;UBERON:0002193,4.11e-14,108;UBERON:0002371,6.05e-14,76;UBERON:0002390,6.60e-14,98;UBERON:0003061,6.60e-14,98;UBERON:0001893,1.39e-13,34;UBERON:0003081,1.59e-13,203;UBERON:0003528,1.72e-13,34;UBERON:0002020,1.72e-13,34;UBERON:0002405,4.27e-13,93;UBERON:0002791,1.72e-12,32;UBERON:0001869,3.54e-12,32;UBERON:0001474,1.00e-11,82;UBERON:0003075,1.69e-11,82;UBERON:0007284,1.69e-11,82;UBERON:0001016,2.20e-11,89;UBERON:0002619,1.36e-10,22;UBERON:0002346,3.03e-10,86;UBERON:0000926,9.99e-10,315;UBERON:0004120,9.99e-10,315;UBERON:0006603,9.99e-10,315;UBERON:0004765,2.56e-09,90;UBERON:0001950,3.68e-09,20;UBERON:0010371,5.40e-09,104;UBERON:0010314,6.32e-09,132;UBERON:0000956,1.44e-08,25;UBERON:0000203,1.44e-08,25;UBERON:0000025,2.91e-08,192;UBERON:0004111,3.16e-08,240;UBERON:0000479,4.01e-08,773;UBERON:0001434,4.82e-08,100;UBERON:0003056,7.48e-07,61;UBERON:0000125,8.14e-07,9;UBERON:0002308,8.14e-07,9 | |||
|phase1_expression=3.27021082687002,2.5692062866918,8.03440103347036,2.00146596706261,5.81049422755474,3.48935409640147,0,0.631719873426831,0,0.245733936501509,1.39560233594486,0.873765488520689,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,2.94150634300544,0,0.30120591877825,0,0,0,0.880801318004542,2.21598163412751,3.00816671205213,1.95309783644267,5.59788685599811,4.21061765824673,9.5302960024649,1.16318591023652,2.64513160582167,1.21292030593908,2.09186133215116,1.6446715520873,3.09706370895104,2.01384674625505,2.0492856522328,2.83778675866302,3.7922024881028,2.5819387343353,2.70852973188684,2.44715041405386,2.45615535052061,2.69668181334102,3.36692281607993,3.20929027076094,1.27867425159808,1.9791078011203,2.79249120670285,1.70489900213078,3.19230162491442,1.70215567407342,0.622822248995575,2.00998932205395,1.5644487552606,4.12658804939722,1.81619850790011,1.47311054395026,3.16462387440884,4.85887158517466,4.25208599930087,2.09658645508376,11.0082058523565,13.6660972485771,9.32208402843065,2.28010194992999,0.99458338599545,2.37463399894024,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0,0,0,0,4.87613732627923,4.02420515822182,0.895037932904712,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0,0,0.175669571386252,3.86388272718252,0,0,12.6573483525327,17.4129737299267,15.5560813807072,0.715471872916026,0.571994910780128,0.371457501329565,1.19257444420023,0.860234595106124,0.347140501607594,1.69592382577203,0.838998872419812,1.6507082516404,1.04497483268405,3.6178346283706,5.69226020298736,8.36801531911676,0.402829317109147,3.04108842287405,0.976248230192678,3.30896772311282,0.81014194788176,9.82297011124877,3.59246996201872,4.95490514126618,1.53316637465883,2.84779697870439,1.46561395144326,0,0,0,0,0.25326102332916,2.51577443545116,1.72101972449288,1.06400514659507,0,0,0.49333509683432,4.66816553099649,1.61652806483626,0.817309515567294,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,1.02088964844019,0,0,0.423863802319124,0,0.515262646192195,0,0.930584281657949,0,0.292311015483596,0,0.460249493211497,0.646584227275248,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0.8231480226628,0,0,0,0.590789906681404,0,1.22988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0.288732895522148,0.462985512576611,1.14152491340759,0,0,21.9133135417784,35.1006397708856,14.1199604174292,0,0.16798212819886,0.141775097242386,1.79117045405697,1.74380363108377,0,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,1.58390374586686,4.22015127883421,0,0.599837947092342,7.29742683847143,5.52482800575339,18.9750545534728,0,0,0,2.46128221334885,0.410952645100767,4.65558504423729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,1.86091223510599,2.37285620900479,1.60091336705167,0.606255142892519,1.66435439510497,0,2.72918588600655,0.920771839728375,0.561320188866147,4.74114852246094,5.11707249066703,1.12597744800525,0,0.154209693802656,0.710246901252508,2.79232330446951,1.03850885836724,1.97557643381931,1.20859449591622,0.200506470303285,0.0920809889358963,0.918515585316854,0.546273504020151,0.786746489756545,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.863663664408557,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.33953315142039,0.366277859273374,0.247528499761764,0,0.650060246036521,6.42735719376638,0,0.154048617114644,0.15350367472613,0,0.644521469209642,0.435050081742686,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.382838137483752,0,0,0.94443704049192,0.6970372701606,0.924100740528266,0,0.869932992075073,0,0.286249773483982,0,0.949138274156178,1.14378116354295,0,0,0.636406495851874,0,1.43897966066652,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,0,0.682499557039929,2.68670320712054,0,0,0.66343897524122,0,0,0.655894752046633,0,0.92947049429925,0,0.573645408816206,0.589494246078727,0,0.709522128141196,0.844430541190656,2.63435914367922,0,0,0.0962221127255121,0,0,2.16530741786592,0,0,0,0,1.01489521846434,3.0585488285695,1.70894156152249,1.42939065274673,2.46817363851717,2.59389324477087,1.08006287447623,0,1.92283328029452,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0.403599414382095,0.851692475380653,0,0,0,0,0.19538809540204,0,0,0,0,0,0,5.56731081233197,2.18448939149124,0,0,4.7748896947538,2.37571744666111,3.68592842519078,1.9882952955326,4.22008249231538,0,0,0,24.3082545666305,2.76283915531148,0,0.20453736500431,0,0,0.0898683511473268,0.179021174675609,0,2.86065876347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| |||
|short_description=p5@FAM198B | |||
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Latest revision as of 10:23, 16 September 2015
Short description: | p5@FAM198B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM198B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337222, ENST00000393807, ENST00000417442, NM_001031700, NM_001128424, uc003ipq.3, uc003ipr.3, uc003ips.2_5end |
EntrezGene: | FAM198B |
HGNC: | 25312 |
UniProt: | Q6UWH4Q9NYZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.75e-21 | 59 |
monocyte | 2.75e-21 | 59 |
monoblast | 2.75e-21 | 59 |
promonocyte | 2.75e-21 | 59 |
defensive cell | 6.46e-21 | 48 |
phagocyte | 6.46e-21 | 48 |
macrophage dendritic cell progenitor | 5.37e-20 | 61 |
myeloid lineage restricted progenitor cell | 3.82e-17 | 66 |
granulocyte monocyte progenitor cell | 1.25e-16 | 67 |
myeloid leukocyte | 1.28e-16 | 72 |
classical monocyte | 5.36e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.36e-16 | 42 |
macrophage | 4.40e-07 | 6 |