FFCP PHASE1:Mm9::chr17:57220030..57220048,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:57220030..57220048,-|id=chr17:57220030..57220048,-|ontology_enrichment_celltype=CL:0000117!6.50e-16!23;CL:0000337!6.50e-16!23;CL:0000540!7.19e-14!33;CL:0000047!7.19e-14!33;CL:0000031!7.19e-14!33;CL:0000404!7.19e-14!33;CL:0000393!3.20e-12!39;CL:0000211!3.20e-12!39;CL:0000221!4.09e-12!44;CL:0000133!4.09e-12!44;CL:0002319!8.32e-12!43;CL:0000055!2.78e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.66e-25,23;CL:0000337,6.66e-25,23;CL:0000540,6.48e-16,33;CL:0000047,6.48e-16,33;CL:0000031,6.48e-16,33;CL:0000404,6.48e-16,33;CL:0002319,6.11e-14,43;CL:0000221,1.66e-13,44;CL:0000133,1.66e-13,44;CL:0000393,9.40e-13,39;CL:0000211,9.40e-13,39;CL:0002610,3.09e-07,3;CL:0002614,7.80e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.66e-33!73;UBERON:0005743!1.66e-33!73;UBERON:0000073!1.77e-33!75;UBERON:0001016!1.77e-33!75;UBERON:0000033!5.50e-30!63;UBERON:0001049!1.07e-29!52;UBERON:0005068!1.07e-29!52;UBERON:0006241!1.07e-29!52;UBERON:0007135!1.07e-29!52;UBERON:0002346!3.56e-29!71;UBERON:0003075!3.56e-29!71;UBERON:0007284!3.56e-29!71;UBERON:0004121!8.34e-29!102;UBERON:0000924!8.34e-29!102;UBERON:0006601!8.34e-29!102;UBERON:0000955!1.68e-28!50;UBERON:0006238!1.68e-28!50;UBERON:0002616!9.12e-28!49;UBERON:0003056!2.05e-27!49;UBERON:0003080!9.16e-24!40;UBERON:0002780!5.49e-23!39;UBERON:0001890!5.49e-23!39;UBERON:0006240!5.49e-23!39;UBERON:0002020!1.35e-22!34;UBERON:0002791!3.63e-19!29;UBERON:0003528!3.63e-19!29;UBERON:0001893!3.63e-19!29;UBERON:0007811!9.76e-17!86;UBERON:0000153!5.55e-14!94;UBERON:0000956!1.02e-13!21;UBERON:0001869!1.02e-13!21;UBERON:0000203!1.02e-13!21;UBERON:0002619!2.50e-11!17;UBERON:0000025!1.08e-10!114;UBERON:0002021!1.07e-09!10;UBERON:0000411!1.07e-09!10;UBERON:0001950!1.07e-09!10;UBERON:0004111!4.29e-09!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.09e-47,73;UBERON:0000073,1.30e-46,54;UBERON:0001016,1.32e-45,75;UBERON:0001049,7.27e-43,52;UBERON:0005068,7.27e-43,52;UBERON:0006241,7.27e-43,52;UBERON:0007135,7.27e-43,52;UBERON:0002020,1.18e-39,34;UBERON:0000955,4.89e-37,47;UBERON:0006238,4.89e-37,47;UBERON:0004121,7.60e-36,95;UBERON:0000924,7.60e-36,95;UBERON:0006601,7.60e-36,95;UBERON:0002616,1.64e-35,46;UBERON:0002346,2.63e-35,64;UBERON:0003075,2.63e-35,64;UBERON:0007284,2.63e-35,64;UBERON:0003528,1.79e-34,29;UBERON:0002791,1.79e-34,29;UBERON:0001893,1.79e-34,29;UBERON:0003080,2.01e-30,40;UBERON:0010371,7.38e-30,73;UBERON:0002780,7.97e-29,39;UBERON:0001890,7.97e-29,39;UBERON:0006240,7.97e-29,39;UBERON:0003056,1.59e-25,49;UBERON:0000956,2.46e-24,21;UBERON:0001869,2.46e-24,21;UBERON:0000203,2.46e-24,21;UBERON:0010314,7.41e-22,92;UBERON:0002619,2.21e-21,17;UBERON:0002021,6.74e-21,10;UBERON:0000411,6.74e-21,10;UBERON:0001950,6.74e-21,10;UBERON:0000025,8.38e-15,114;UBERON:0004111,2.90e-13,122;UBERON:0003076,3.03e-12,12;UBERON:0003057,3.03e-12,12;UBERON:0011216,1.12e-11,194;UBERON:0002420,5.42e-11,8;UBERON:0007245,5.42e-11,8;UBERON:0010009,5.42e-11,8;UBERON:0010011,5.42e-11,8;UBERON:0000454,5.42e-11,8;UBERON:0002950,1.74e-08,4;UBERON:0001891,1.74e-08,4;UBERON:0009616,1.74e-08,4;UBERON:0010286,1.74e-08,4;UBERON:0002240,5.38e-08,6;UBERON:0005174,5.38e-08,6;UBERON:0001137,5.38e-08,6;UBERON:0000483,2.07e-07,174;UBERON:0004684,3.09e-07,3;UBERON:0002275,3.09e-07,3;UBERON:0000119,3.14e-07,176;UBERON:0002038,7.80e-07,3;UBERON:0009663,7.80e-07,3;UBERON:0009661,7.80e-07,3;UBERON:0000125,7.80e-07,3;UBERON:0002308,7.80e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,1.19840044207362,1.53687322128622,0.725827286159344,1.21505344498522,1.05162480675691,1.99955689082663,2.65042249141936,0.489963196859816,1.15014565221884,1.83843757322004,6.60695285996332,6.51205424234457,7.68032666281217,1.18697658957174,3.11057988248193,0.52091337055676,7.53794097303729,4.50210088025344,4.27835093775068,4.12480019663135,3.27454865837937,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0,0,0,4.34392854273986,6.40500843946077,1.13088916901578,4.34560800480691,4.60287823194595,6.2336413367868,4.05603157669394,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.544291993210623,0.640568601424249,0.749613796477831,2.58703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0.439100230582101,0,3.57492912559016,2.6755199218614,0,0.264450566663544,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.316182685621286,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0,0,0,0,0,5.77982123956051,7.03270119553219,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0,2.57057053137446,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,8.52956389248344,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,15.2482997506608,11.9684561491866,12.0308057822273,7.04598047609119,1.37016503954128,9.06472676867641,5.40018000185445,7.65546045481175,8.60970577069989,11.39072685854,0.31136204275253,0,0,0.486213434136588,0.419226325255965,0.367687016900028,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.394017929502254,0,0,0,0.499621155875892,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr17:57220030..57220048,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:57220030..57220048,- | |||
|description=CAGE_peak_at_chr17:57220030..57220048,- | |||
|id=chr17:57220030..57220048,- | |||
|ontology_enrichment_celltype=CL:0000117!6.50e-16!23;CL:0000337!6.50e-16!23;CL:0000540!7.19e-14!33;CL:0000047!7.19e-14!33;CL:0000031!7.19e-14!33;CL:0000404!7.19e-14!33;CL:0000393!3.20e-12!39;CL:0000211!3.20e-12!39;CL:0000221!4.09e-12!44;CL:0000133!4.09e-12!44;CL:0002319!8.32e-12!43;CL:0000055!2.78e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.66e-25,23;CL:0000337,6.66e-25,23;CL:0000540,6.48e-16,33;CL:0000047,6.48e-16,33;CL:0000031,6.48e-16,33;CL:0000404,6.48e-16,33;CL:0002319,6.11e-14,43;CL:0000221,1.66e-13,44;CL:0000133,1.66e-13,44;CL:0000393,9.40e-13,39;CL:0000211,9.40e-13,39;CL:0002610,3.09e-07,3;CL:0002614,7.80e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-33!73;UBERON:0005743!1.66e-33!73;UBERON:0000073!1.77e-33!75;UBERON:0001016!1.77e-33!75;UBERON:0000033!5.50e-30!63;UBERON:0001049!1.07e-29!52;UBERON:0005068!1.07e-29!52;UBERON:0006241!1.07e-29!52;UBERON:0007135!1.07e-29!52;UBERON:0002346!3.56e-29!71;UBERON:0003075!3.56e-29!71;UBERON:0007284!3.56e-29!71;UBERON:0004121!8.34e-29!102;UBERON:0000924!8.34e-29!102;UBERON:0006601!8.34e-29!102;UBERON:0000955!1.68e-28!50;UBERON:0006238!1.68e-28!50;UBERON:0002616!9.12e-28!49;UBERON:0003056!2.05e-27!49;UBERON:0003080!9.16e-24!40;UBERON:0002780!5.49e-23!39;UBERON:0001890!5.49e-23!39;UBERON:0006240!5.49e-23!39;UBERON:0002020!1.35e-22!34;UBERON:0002791!3.63e-19!29;UBERON:0003528!3.63e-19!29;UBERON:0001893!3.63e-19!29;UBERON:0007811!9.76e-17!86;UBERON:0000153!5.55e-14!94;UBERON:0000956!1.02e-13!21;UBERON:0001869!1.02e-13!21;UBERON:0000203!1.02e-13!21;UBERON:0002619!2.50e-11!17;UBERON:0000025!1.08e-10!114;UBERON:0002021!1.07e-09!10;UBERON:0000411!1.07e-09!10;UBERON:0001950!1.07e-09!10;UBERON:0004111!4.29e-09!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.09e-47,73;UBERON:0000073,1.30e-46,54;UBERON:0001016,1.32e-45,75;UBERON:0001049,7.27e-43,52;UBERON:0005068,7.27e-43,52;UBERON:0006241,7.27e-43,52;UBERON:0007135,7.27e-43,52;UBERON:0002020,1.18e-39,34;UBERON:0000955,4.89e-37,47;UBERON:0006238,4.89e-37,47;UBERON:0004121,7.60e-36,95;UBERON:0000924,7.60e-36,95;UBERON:0006601,7.60e-36,95;UBERON:0002616,1.64e-35,46;UBERON:0002346,2.63e-35,64;UBERON:0003075,2.63e-35,64;UBERON:0007284,2.63e-35,64;UBERON:0003528,1.79e-34,29;UBERON:0002791,1.79e-34,29;UBERON:0001893,1.79e-34,29;UBERON:0003080,2.01e-30,40;UBERON:0010371,7.38e-30,73;UBERON:0002780,7.97e-29,39;UBERON:0001890,7.97e-29,39;UBERON:0006240,7.97e-29,39;UBERON:0003056,1.59e-25,49;UBERON:0000956,2.46e-24,21;UBERON:0001869,2.46e-24,21;UBERON:0000203,2.46e-24,21;UBERON:0010314,7.41e-22,92;UBERON:0002619,2.21e-21,17;UBERON:0002021,6.74e-21,10;UBERON:0000411,6.74e-21,10;UBERON:0001950,6.74e-21,10;UBERON:0000025,8.38e-15,114;UBERON:0004111,2.90e-13,122;UBERON:0003076,3.03e-12,12;UBERON:0003057,3.03e-12,12;UBERON:0011216,1.12e-11,194;UBERON:0002420,5.42e-11,8;UBERON:0007245,5.42e-11,8;UBERON:0010009,5.42e-11,8;UBERON:0010011,5.42e-11,8;UBERON:0000454,5.42e-11,8;UBERON:0002950,1.74e-08,4;UBERON:0001891,1.74e-08,4;UBERON:0009616,1.74e-08,4;UBERON:0010286,1.74e-08,4;UBERON:0002240,5.38e-08,6;UBERON:0005174,5.38e-08,6;UBERON:0001137,5.38e-08,6;UBERON:0000483,2.07e-07,174;UBERON:0004684,3.09e-07,3;UBERON:0002275,3.09e-07,3;UBERON:0000119,3.14e-07,176;UBERON:0002038,7.80e-07,3;UBERON:0009663,7.80e-07,3;UBERON:0009661,7.80e-07,3;UBERON:0000125,7.80e-07,3;UBERON:0002308,7.80e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,1.19840044207362,1.53687322128622,0.725827286159344,1.21505344498522,1.05162480675691,1.99955689082663,2.65042249141936,0.489963196859816,1.15014565221884,1.83843757322004,6.60695285996332,6.51205424234457,7.68032666281217,1.18697658957174,3.11057988248193,0.52091337055676,7.53794097303729,4.50210088025344,4.27835093775068,4.12480019663135,3.27454865837937,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0,0,0,4.34392854273986,6.40500843946077,1.13088916901578,4.34560800480691,4.60287823194595,6.2336413367868,4.05603157669394,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.544291993210623,0.640568601424249,0.749613796477831,2.58703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0.439100230582101,0,3.57492912559016,2.6755199218614,0,0.264450566663544,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.316182685621286,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0,0,0,0,0,5.77982123956051,7.03270119553219,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0,2.57057053137446,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,8.52956389248344,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,15.2482997506608,11.9684561491866,12.0308057822273,7.04598047609119,1.37016503954128,9.06472676867641,5.40018000185445,7.65546045481175,8.60970577069989,11.39072685854,0.31136204275253,0,0,0.486213434136588,0.419226325255965,0.367687016900028,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.394017929502254,0,0,0,0.499621155875892,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr17:57220030..57220048,- | |||
}} |
Latest revision as of 04:06, 5 August 2015
Short description: | p@chr17:57220030..57220048, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57220030..57220048, - |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.66e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.66e-25 | 23 |
neuron | 6.48e-16 | 33 |
neuronal stem cell | 6.48e-16 | 33 |
neuroblast | 6.48e-16 | 33 |
electrically signaling cell | 6.48e-16 | 33 |
neural cell | 6.11e-14 | 43 |
ectodermal cell | 1.66e-13 | 44 |
neurectodermal cell | 1.66e-13 | 44 |
electrically responsive cell | 9.40e-13 | 39 |
electrically active cell | 9.40e-13 | 39 |
raphe nuclei neuron | 3.09e-07 | 3 |
neuron of the substantia nigra | 7.80e-07 | 3 |