FFCP PHASE1:Hg19::chr5:87986793..87986806,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=51bp_to_ENST00000513893_5end | |||
|cluster_id=chr5:87986793..87986806,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_7_at_LINC00461_5end | |||
|id=chr5:87986793..87986806,- | |||
|ontology_enrichment_celltype=CL:0000128!3.17e-12!7;CL:0000126!3.17e-12!7;CL:0000127!3.17e-12!7;CL:0002453!3.17e-12!7;CL:0002605!2.44e-11!3;CL:0000047!3.90e-11!8;CL:0002319!4.81e-11!25 | |||
|ontology_enrichment_celltype_v019=CL:0000128;2.99e-17;7!CL:0000126;2.99e-17;7!CL:0000127;2.99e-17;7!CL:0002319;1.35e-16;25!CL:0002605;8.68e-16;3!CL:0000047;3.58e-11;2!CL:0000540;2.60e-08;6!CL:0000404;2.60e-08;6!CL:0002603;4.40e-07;3!CL:0000243;6.05e-07;15!CL:0000125;6.05e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.24e-17,7;CL:0000126,2.24e-17,7;CL:0000127,2.24e-17,7;CL:0002453,2.24e-17,7;CL:0002319,1.18e-16,25;CL:0000047,6.77e-16,8;CL:0002605,8.92e-16,3;CL:0000540,2.61e-08,6;CL:0000031,2.61e-08,6;CL:0000404,2.61e-08,6;CL:0000133,1.09e-07,59;CL:0002603,3.32e-07,3;CL:0000243,5.41e-07,15;CL:0000125,5.41e-07,15;CL:0000030,5.41e-07,15;CL:0000339,5.41e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.11e-15;3!CL:0000031;2.60e-08;6!CL:0000339;6.05e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.44e-99!82;UBERON:0001049!1.08e-98!57;UBERON:0005068!1.08e-98!57;UBERON:0006241!1.08e-98!57;UBERON:0007135!1.08e-98!57;UBERON:0005743!2.83e-94!86;UBERON:0002616!4.77e-86!59;UBERON:0000073!2.08e-84!94;UBERON:0001016!2.08e-84!94;UBERON:0000955!5.98e-83!69;UBERON:0006238!5.98e-83!69;UBERON:0001893!1.54e-77!34;UBERON:0002020!2.41e-77!34;UBERON:0003528!2.41e-77!34;UBERON:0001869!3.29e-77!32;UBERON:0002791!1.21e-74!33;UBERON:0002780!3.92e-72!41;UBERON:0001890!3.92e-72!41;UBERON:0006240!3.92e-72!41;UBERON:0003080!2.96e-70!42;UBERON:0000956!1.10e-68!25;UBERON:0000203!1.10e-68!25;UBERON:0003075!2.05e-65!86;UBERON:0007284!2.05e-65!86;UBERON:0002346!4.73e-62!90;UBERON:0002619!6.11e-59!22;UBERON:0001950!3.21e-53!20;UBERON:0003056!4.42e-46!61;UBERON:0000033!1.49e-44!123;UBERON:0004121!2.60e-42!169;UBERON:0000153!5.36e-42!129;UBERON:0007811!5.36e-42!129;UBERON:0000924!4.51e-41!173;UBERON:0006601!4.51e-41!173;UBERON:0007023!1.59e-34!115;UBERON:0003076!4.99e-28!15;UBERON:0003057!4.99e-28!15;UBERON:0004733!1.08e-24!12;UBERON:0002028!1.08e-24!12;UBERON:0007277!1.08e-24!12;UBERON:0000025!5.75e-23!194;UBERON:0004732!1.23e-22!13;UBERON:0002680!6.12e-22!9;UBERON:0001895!6.12e-22!9;UBERON:0010092!6.12e-22!9;UBERON:0000200!3.76e-19!6;UBERON:0002021!5.29e-17!5;UBERON:0001872!8.96e-17!5;UBERON:0004111!2.10e-16!241;UBERON:0001871!1.08e-14!7;UBERON:0002037!4.60e-14!6;UBERON:0006215!4.60e-14!6;UBERON:0000477!5.08e-13!286;UBERON:0000064!5.94e-13!219;UBERON:0002308!1.23e-11!9;UBERON:0000125!1.23e-11!9;UBERON:0000483!2.80e-11!309;UBERON:0000119!4.54e-11!312;UBERON:0002771!1.39e-10!3;UBERON:0000349!1.99e-10!5;UBERON:0000988!1.17e-09!3;UBERON:0000475!2.80e-09!365;UBERON:0002298!3.40e-09!8;UBERON:0002420!2.12e-08!9;UBERON:0007245!2.12e-08!9;UBERON:0010009!2.12e-08!9;UBERON:0010011!2.12e-08!9;UBERON:0000454!2.12e-08!9;UBERON:0001870!1.61e-07!2;UBERON:0001954!2.63e-07!2;UBERON:0003022!2.63e-07!2;UBERON:0002421!2.63e-07!2;UBERON:0002600!2.63e-07!2;UBERON:0009663!4.04e-07!7;UBERON:0002148!4.82e-07!2;UBERON:0009662!4.82e-07!2;UBERON:0001875!7.70e-07!2;UBERON:0006514!7.70e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.48e-84;25!UBERON:0000203;2.48e-84;25!UBERON:0002619;1.88e-70;22!UBERON:0001950;1.37e-69;20!UBERON:0001869;7.32e-69;32!UBERON:0001893;5.81e-65;34!UBERON:0002791;9.24e-64;32!UBERON:0003528;3.73e-58;34!UBERON:0002020;3.73e-58;34!UBERON:0002780;7.22e-41;41!UBERON:0001890;7.22e-41;41!UBERON:0000073;1.91e-37;53!UBERON:0002616;1.91e-37;53!UBERON:0001017;1.58e-28;75!UBERON:0000955;3.11e-28;68!UBERON:0002021;4.32e-24;5!UBERON:0001872;7.70e-24;5!UBERON:0001016;7.80e-24;83!UBERON:0002037;1.04e-19;6!UBERON:0000200;2.72e-19;6!UBERON:0001871;6.74e-17;6!UBERON:0002680;4.50e-13;9!UBERON:0001895;4.50e-13;9!UBERON:0002771;1.77e-10;2!UBERON:0011216;6.09e-10;132!UBERON:0004733;9.61e-10;12!UBERON:0002028;9.61e-10;12!UBERON:0004732;5.65e-09;13!UBERON:0002114;1.69e-07;2!UBERON:0001870;2.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.97e-84,25;UBERON:0000203,2.97e-84,25;UBERON:0001869,9.68e-78,32;UBERON:0001017,6.60e-77,81;UBERON:0001893,5.51e-73,34;UBERON:0002791,2.27e-71,32;UBERON:0002619,2.18e-70,22;UBERON:0001950,1.54e-69,20;UBERON:0001049,5.96e-69,56;UBERON:0005068,5.96e-69,56;UBERON:0006241,5.96e-69,56;UBERON:0007135,5.96e-69,56;UBERON:0001016,1.14e-68,89;UBERON:0000073,5.62e-68,53;UBERON:0002616,5.62e-68,53;UBERON:0003528,5.46e-67,34;UBERON:0002020,5.46e-67,34;UBERON:0002780,6.60e-60,41;UBERON:0001890,6.60e-60,41;UBERON:0003080,6.60e-60,41;UBERON:0006240,6.60e-60,41;UBERON:0000955,4.01e-59,68;UBERON:0006238,4.01e-59,68;UBERON:0003075,2.65e-45,82;UBERON:0007284,2.65e-45,82;UBERON:0002346,6.43e-43,86;UBERON:0003056,8.33e-39,61;UBERON:0010371,1.96e-34,104;UBERON:0004121,8.24e-33,171;UBERON:0000924,8.24e-33,171;UBERON:0006601,8.24e-33,171;UBERON:0011216,2.70e-28,223;UBERON:0010314,8.53e-28,132;UBERON:0002021,5.01e-24,5;UBERON:0001872,1.08e-23,5;UBERON:0002037,6.34e-20,6;UBERON:0006215,6.34e-20,6;UBERON:0000200,2.95e-19,6;UBERON:0001871,4.90e-17,6;UBERON:0007023,1.55e-16,114;UBERON:0000025,9.87e-16,192;UBERON:0002680,3.26e-13,9;UBERON:0001895,3.26e-13,9;UBERON:0010092,3.26e-13,9;UBERON:0004111,2.67e-11,240;UBERON:0003076,4.54e-11,15;UBERON:0003057,4.54e-11,15;UBERON:0002771,1.95e-10,2;UBERON:0004733,7.59e-10,12;UBERON:0002028,7.59e-10,12;UBERON:0007277,7.59e-10,12;UBERON:0004732,4.55e-09,13;UBERON:0000483,1.71e-07,306;UBERON:0002114,2.26e-07,2;UBERON:0000119,2.33e-07,309;UBERON:0001870,3.11e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60057375499824,0,1.56727360739044,11.7356754723733,5.33810257784248,5.52387614217132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4342580900109,7.8083912314573,24.7452420088863,15.9140452067631,22.3278563078607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.74214478529481,19.9613798001194,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,4.75490817704266,5.6154047601174,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.702793337176017,0,0,0,0,0,19.5886567443514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0,0,0,0,0,2.36923270966296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,1.502291168478,0,0.554645257684261,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,1.41696576325585,2.07524016774297,2.66651273512982,41.5918298765835,1.52145955421279,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,2.34323429584154,1.2401207790071,1.14148458349032,46.4928587665487,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,1.71009211263408,0,0,0,1.09980912941201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,4.226557275834,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,35.7807566079109,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@LINC00461 | |||
}} |
Latest revision as of 03:25, 19 September 2015
Short description: | p7@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LINC00461_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 51bp_to_ENST00000513893_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.24e-17 | 7 |
macroglial cell | 2.24e-17 | 7 |
astrocyte | 2.24e-17 | 7 |
oligodendrocyte precursor cell | 2.24e-17 | 7 |
neural cell | 1.18e-16 | 25 |
neuronal stem cell | 6.77e-16 | 8 |
astrocyte of the cerebral cortex | 8.92e-16 | 3 |
neuron | 2.61e-08 | 6 |
neuroblast | 2.61e-08 | 6 |
electrically signaling cell | 2.61e-08 | 6 |
neurectodermal cell | 1.09e-07 | 59 |
astrocyte of the cerebellum | 3.32e-07 | 3 |
glial cell (sensu Vertebrata) | 5.41e-07 | 15 |
glial cell | 5.41e-07 | 15 |
glioblast | 5.41e-07 | 15 |
glioblast (sensu Vertebrata) | 5.41e-07 | 15 |