FFCP PHASE1:Mm9::chr2:156439379..156439397,+: Difference between revisions
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{{FFCP|EntrezGene=228836|HGNC=|MCL_coexpression_id=1|UniProt=B1AZP2|association_with_transcript=-43bp_to_ENSMUST00000109567,ENSMUST00000139136,ENSMUST00000169464,NM_146128,uc008nnr.1_5end|description=CAGE_peak_12_at_Dlgap4_5end|id=chr2:156439379..156439397,+|ontology_enrichment_celltype=CL:0000117!3.12e-16!23;CL:0000337!3.12e-16!23;CL:0002319!5.55e-12!43;CL:0000540!8.53e-12!33;CL:0000047!8.53e-12!33;CL:0000031!8.53e-12!33;CL:0000404!8.53e-12!33;CL:0000221!1.97e-11!44;CL:0000133!1.97e-11!44;CL:0000055!1.05e-09!50;CL:0000393!1.34e-09!39;CL:0000211!1.34e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-24,23;CL:0000337,2.22e-24,23;CL:0000540,1.54e-15,33;CL:0000047,1.54e-15,33;CL:0000031,1.54e-15,33;CL:0000404,1.54e-15,33;CL:0000393,1.97e-12,39;CL:0000211,1.97e-12,39;CL:0002319,7.51e-11,43;CL:0000221,1.68e-10,44;CL:0000133,1.68e-10,44;CL:0002610,7.08e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.96e-30!73;UBERON:0005743!2.96e-30!73;UBERON:0000073!9.31e-29!75;UBERON:0001016!9.31e-29!75;UBERON:0001049!1.71e-27!52;UBERON:0005068!1.71e-27!52;UBERON:0006241!1.71e-27!52;UBERON:0007135!1.71e-27!52;UBERON:0000955!2.74e-26!50;UBERON:0006238!2.74e-26!50;UBERON:0002616!2.26e-25!49;UBERON:0004121!2.35e-25!102;UBERON:0000924!2.35e-25!102;UBERON:0006601!2.35e-25!102;UBERON:0002346!2.16e-24!71;UBERON:0003075!2.16e-24!71;UBERON:0007284!2.16e-24!71;UBERON:0002020!3.33e-24!34;UBERON:0000033!1.11e-22!63;UBERON:0002791!2.23e-20!29;UBERON:0003528!2.23e-20!29;UBERON:0001893!2.23e-20!29;UBERON:0003080!3.95e-19!40;UBERON:0002780!2.39e-18!39;UBERON:0001890!2.39e-18!39;UBERON:0006240!2.39e-18!39;UBERON:0003056!8.44e-18!49;UBERON:0000956!1.37e-14!21;UBERON:0001869!1.37e-14!21;UBERON:0000203!1.37e-14!21;UBERON:0007811!2.46e-12!86;UBERON:0002619!5.38e-12!17;UBERON:0000153!2.68e-10!94;UBERON:0002021!4.41e-10!10;UBERON:0000411!4.41e-10!10;UBERON:0001950!4.41e-10!10;UBERON:0003076!6.40e-09!12;UBERON:0003057!6.40e-09!12;UBERON:0002420!5.75e-07!8;UBERON:0007245!5.75e-07!8;UBERON:0010009!5.75e-07!8;UBERON:0010011!5.75e-07!8;UBERON:0000454!5.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.31e-48,54;UBERON:0001049,4.73e-44,52;UBERON:0005068,4.73e-44,52;UBERON:0006241,4.73e-44,52;UBERON:0007135,4.73e-44,52;UBERON:0002020,1.12e-42,34;UBERON:0001017,1.37e-41,73;UBERON:0001016,3.18e-40,75;UBERON:0000955,3.41e-36,47;UBERON:0006238,3.41e-36,47;UBERON:0002616,2.20e-34,46;UBERON:0003528,2.64e-34,29;UBERON:0002791,2.64e-34,29;UBERON:0001893,2.64e-34,29;UBERON:0002346,4.19e-34,64;UBERON:0003075,4.19e-34,64;UBERON:0007284,4.19e-34,64;UBERON:0003080,3.21e-30,40;UBERON:0004121,1.02e-29,95;UBERON:0000924,1.02e-29,95;UBERON:0006601,1.02e-29,95;UBERON:0010371,8.66e-29,73;UBERON:0002780,1.31e-28,39;UBERON:0001890,1.31e-28,39;UBERON:0006240,1.31e-28,39;UBERON:0000956,2.89e-24,21;UBERON:0001869,2.89e-24,21;UBERON:0000203,2.89e-24,21;UBERON:0003056,2.36e-23,49;UBERON:0002619,4.74e-21,17;UBERON:0010314,5.53e-21,92;UBERON:0002021,1.08e-20,10;UBERON:0000411,1.08e-20,10;UBERON:0001950,1.08e-20,10;UBERON:0000025,3.34e-15,114;UBERON:0003076,1.08e-13,12;UBERON:0003057,1.08e-13,12;UBERON:0004111,1.28e-13,122;UBERON:0002420,6.78e-11,8;UBERON:0007245,6.78e-11,8;UBERON:0010009,6.78e-11,8;UBERON:0010011,6.78e-11,8;UBERON:0000454,6.78e-11,8;UBERON:0002240,7.36e-11,6;UBERON:0005174,7.36e-11,6;UBERON:0001137,7.36e-11,6;UBERON:0011216,1.56e-09,194;UBERON:0001948,2.39e-09,5;UBERON:0002315,2.39e-09,5;UBERON:0002950,6.28e-08,4;UBERON:0001891,6.28e-08,4;UBERON:0009616,6.28e-08,4;UBERON:0010286,6.28e-08,4;UBERON:0000483,6.31e-07,174;UBERON:0004684,7.08e-07,3;UBERON:0002275,7.08e-07,3;UBERON:0000119,9.46e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,0.439372365468944,0,0.839918529752175,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,1.03689612308478,1.4850653216486,0.630974884054146,2.85650984403804,3.53389665522582,0.367472397644862,1.0543001812006,1.83843757322004,4.40463523997555,4.72443150915195,2.91852413186863,0.791317726381163,1.9212405156506,1.56274011167028,1.3959149950069,3.93933827022176,3.0559649555362,1.47314292736834,2.56269025438385,2.23679334990361,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0.608930956624282,0.230615497256059,0,0,0.376999773989026,0,0,0,0,0,0,0,2.34224637609238,2.93225389538837,0,0,0,0,3.14560342750128,6.8625090422794,2.76439574648302,7.99591872884472,8.18289463457058,2.0778804455956,4.54275536589721,0.101839363850316,0,0,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.243206428637567,0.438599962275997,0,0.402619256281115,3.99550902271842,1.23485534855141,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.99259867206745,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,5.14114106274891,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,1.69107881605257,0,0.330916980914195,0.388902376688095,0.516639293910924,0,0.352071715937262,0.911430693907651,1.15345278868282,1.44950472495604,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0,7.34177395402186,4.14292712856459,4.01026859407578,6.35856774671644,6.16574267793578,6.0431511791176,4.72515750162264,8.55610286126019,3.17199686288943,9.83744592328458,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.367687016900028,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.448176066834085,0.402048282689293,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.338458431566706,0,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p12@Dlgap4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228836 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1AZP2 | |||
|association_with_transcript=-43bp_to_ENSMUST00000109567,ENSMUST00000139136,ENSMUST00000169464,NM_146128,uc008nnr.1_5end | |||
|cluster_id=chr2:156439379..156439397,+ | |||
|description=CAGE_peak_12_at_Dlgap4_5end | |||
|id=chr2:156439379..156439397,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.12e-16!23;CL:0000337!3.12e-16!23;CL:0002319!5.55e-12!43;CL:0000540!8.53e-12!33;CL:0000047!8.53e-12!33;CL:0000031!8.53e-12!33;CL:0000404!8.53e-12!33;CL:0000221!1.97e-11!44;CL:0000133!1.97e-11!44;CL:0000055!1.05e-09!50;CL:0000393!1.34e-09!39;CL:0000211!1.34e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-24,23;CL:0000337,2.22e-24,23;CL:0000540,1.54e-15,33;CL:0000047,1.54e-15,33;CL:0000031,1.54e-15,33;CL:0000404,1.54e-15,33;CL:0000393,1.97e-12,39;CL:0000211,1.97e-12,39;CL:0002319,7.51e-11,43;CL:0000221,1.68e-10,44;CL:0000133,1.68e-10,44;CL:0002610,7.08e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.96e-30!73;UBERON:0005743!2.96e-30!73;UBERON:0000073!9.31e-29!75;UBERON:0001016!9.31e-29!75;UBERON:0001049!1.71e-27!52;UBERON:0005068!1.71e-27!52;UBERON:0006241!1.71e-27!52;UBERON:0007135!1.71e-27!52;UBERON:0000955!2.74e-26!50;UBERON:0006238!2.74e-26!50;UBERON:0002616!2.26e-25!49;UBERON:0004121!2.35e-25!102;UBERON:0000924!2.35e-25!102;UBERON:0006601!2.35e-25!102;UBERON:0002346!2.16e-24!71;UBERON:0003075!2.16e-24!71;UBERON:0007284!2.16e-24!71;UBERON:0002020!3.33e-24!34;UBERON:0000033!1.11e-22!63;UBERON:0002791!2.23e-20!29;UBERON:0003528!2.23e-20!29;UBERON:0001893!2.23e-20!29;UBERON:0003080!3.95e-19!40;UBERON:0002780!2.39e-18!39;UBERON:0001890!2.39e-18!39;UBERON:0006240!2.39e-18!39;UBERON:0003056!8.44e-18!49;UBERON:0000956!1.37e-14!21;UBERON:0001869!1.37e-14!21;UBERON:0000203!1.37e-14!21;UBERON:0007811!2.46e-12!86;UBERON:0002619!5.38e-12!17;UBERON:0000153!2.68e-10!94;UBERON:0002021!4.41e-10!10;UBERON:0000411!4.41e-10!10;UBERON:0001950!4.41e-10!10;UBERON:0003076!6.40e-09!12;UBERON:0003057!6.40e-09!12;UBERON:0002420!5.75e-07!8;UBERON:0007245!5.75e-07!8;UBERON:0010009!5.75e-07!8;UBERON:0010011!5.75e-07!8;UBERON:0000454!5.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.31e-48,54;UBERON:0001049,4.73e-44,52;UBERON:0005068,4.73e-44,52;UBERON:0006241,4.73e-44,52;UBERON:0007135,4.73e-44,52;UBERON:0002020,1.12e-42,34;UBERON:0001017,1.37e-41,73;UBERON:0001016,3.18e-40,75;UBERON:0000955,3.41e-36,47;UBERON:0006238,3.41e-36,47;UBERON:0002616,2.20e-34,46;UBERON:0003528,2.64e-34,29;UBERON:0002791,2.64e-34,29;UBERON:0001893,2.64e-34,29;UBERON:0002346,4.19e-34,64;UBERON:0003075,4.19e-34,64;UBERON:0007284,4.19e-34,64;UBERON:0003080,3.21e-30,40;UBERON:0004121,1.02e-29,95;UBERON:0000924,1.02e-29,95;UBERON:0006601,1.02e-29,95;UBERON:0010371,8.66e-29,73;UBERON:0002780,1.31e-28,39;UBERON:0001890,1.31e-28,39;UBERON:0006240,1.31e-28,39;UBERON:0000956,2.89e-24,21;UBERON:0001869,2.89e-24,21;UBERON:0000203,2.89e-24,21;UBERON:0003056,2.36e-23,49;UBERON:0002619,4.74e-21,17;UBERON:0010314,5.53e-21,92;UBERON:0002021,1.08e-20,10;UBERON:0000411,1.08e-20,10;UBERON:0001950,1.08e-20,10;UBERON:0000025,3.34e-15,114;UBERON:0003076,1.08e-13,12;UBERON:0003057,1.08e-13,12;UBERON:0004111,1.28e-13,122;UBERON:0002420,6.78e-11,8;UBERON:0007245,6.78e-11,8;UBERON:0010009,6.78e-11,8;UBERON:0010011,6.78e-11,8;UBERON:0000454,6.78e-11,8;UBERON:0002240,7.36e-11,6;UBERON:0005174,7.36e-11,6;UBERON:0001137,7.36e-11,6;UBERON:0011216,1.56e-09,194;UBERON:0001948,2.39e-09,5;UBERON:0002315,2.39e-09,5;UBERON:0002950,6.28e-08,4;UBERON:0001891,6.28e-08,4;UBERON:0009616,6.28e-08,4;UBERON:0010286,6.28e-08,4;UBERON:0000483,6.31e-07,174;UBERON:0004684,7.08e-07,3;UBERON:0002275,7.08e-07,3;UBERON:0000119,9.46e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,0.439372365468944,0,0.839918529752175,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,1.03689612308478,1.4850653216486,0.630974884054146,2.85650984403804,3.53389665522582,0.367472397644862,1.0543001812006,1.83843757322004,4.40463523997555,4.72443150915195,2.91852413186863,0.791317726381163,1.9212405156506,1.56274011167028,1.3959149950069,3.93933827022176,3.0559649555362,1.47314292736834,2.56269025438385,2.23679334990361,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0.608930956624282,0.230615497256059,0,0,0.376999773989026,0,0,0,0,0,0,0,2.34224637609238,2.93225389538837,0,0,0,0,3.14560342750128,6.8625090422794,2.76439574648302,7.99591872884472,8.18289463457058,2.0778804455956,4.54275536589721,0.101839363850316,0,0,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.243206428637567,0.438599962275997,0,0.402619256281115,3.99550902271842,1.23485534855141,0,0,0.426576501070468,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.99259867206745,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,5.14114106274891,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,1.69107881605257,0,0.330916980914195,0.388902376688095,0.516639293910924,0,0.352071715937262,0.911430693907651,1.15345278868282,1.44950472495604,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0,7.34177395402186,4.14292712856459,4.01026859407578,6.35856774671644,6.16574267793578,6.0431511791176,4.72515750162264,8.55610286126019,3.17199686288943,9.83744592328458,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.367687016900028,0,0.412070114477788,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.448176066834085,0.402048282689293,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.338458431566706,0,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p12@Dlgap4 | |||
}} |
Latest revision as of 00:01, 26 September 2015
Short description: | p12@Dlgap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Dlgap4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -43bp_to_ENSMUST00000109567, ENSMUST00000139136, ENSMUST00000169464, NM_146128, uc008nnr.1_5end |
EntrezGene: | Dlgap4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.22e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.22e-24 | 23 |
neuron | 1.54e-15 | 33 |
neuronal stem cell | 1.54e-15 | 33 |
neuroblast | 1.54e-15 | 33 |
electrically signaling cell | 1.54e-15 | 33 |
electrically responsive cell | 1.97e-12 | 39 |
electrically active cell | 1.97e-12 | 39 |
neural cell | 7.51e-11 | 43 |
ectodermal cell | 1.68e-10 | 44 |
neurectodermal cell | 1.68e-10 | 44 |
raphe nuclei neuron | 7.08e-07 | 3 |