FFCP PHASE1:Hg19::chr13:110775905..110775918,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:110775905..110775918,+ to FFCP PHASE1:Hg19::chr13:110775905..110775918,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283485 | |EntrezGene=283485 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=350bp_to_AK093862_5end | |||
|cluster_id=chr13:110775905..110775918,+ | |||
|coexpression_cluster_id=C256 | |||
|description=CAGE_peak_1_at_LOC283485_5end | |||
|id=chr13:110775905..110775918,+ | |||
|ontology_enrichment_celltype=CL:0002605!2.78e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.87e-20;3!UBERON:0003057;7.87e-20;3!UBERON:0006601;1.00e-11;82!UBERON:0010122;1.29e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.04e-100!57;UBERON:0005068!3.04e-100!57;UBERON:0006241!3.04e-100!57;UBERON:0007135!3.04e-100!57;UBERON:0002020!5.39e-90!34;UBERON:0003528!5.39e-90!34;UBERON:0001893!1.48e-89!34;UBERON:0001017!1.97e-87!82;UBERON:0002791!6.26e-86!33;UBERON:0002616!8.24e-86!59;UBERON:0002780!1.68e-85!41;UBERON:0001890!1.68e-85!41;UBERON:0006240!1.68e-85!41;UBERON:0003080!2.38e-83!42;UBERON:0005743!4.52e-83!86;UBERON:0001869!1.37e-81!32;UBERON:0003075!1.94e-79!86;UBERON:0007284!1.94e-79!86;UBERON:0000955!1.36e-75!69;UBERON:0006238!1.36e-75!69;UBERON:0002346!1.42e-75!90;UBERON:0000073!1.42e-74!94;UBERON:0001016!1.42e-74!94;UBERON:0003056!1.26e-63!61;UBERON:0000956!5.08e-55!25;UBERON:0000203!5.08e-55!25;UBERON:0007023!2.45e-49!115;UBERON:0000033!6.79e-47!123;UBERON:0004121!7.98e-45!169;UBERON:0000153!2.31e-44!129;UBERON:0007811!2.31e-44!129;UBERON:0002619!3.18e-44!22;UBERON:0000924!1.32e-43!173;UBERON:0006601!1.32e-43!173;UBERON:0002308!9.59e-38!9;UBERON:0000125!9.59e-38!9;UBERON:0002420!1.24e-37!9;UBERON:0007245!1.24e-37!9;UBERON:0010009!1.24e-37!9;UBERON:0010011!1.24e-37!9;UBERON:0000454!1.24e-37!9;UBERON:0001950!5.36e-37!20;UBERON:0009663!1.90e-29!7;UBERON:0002298!3.68e-26!8;UBERON:0000025!1.11e-25!194;UBERON:0000349!8.71e-22!5;UBERON:0004111!4.67e-19!241;UBERON:0001871!8.72e-19!7;UBERON:0003076!7.42e-18!15;UBERON:0003057!7.42e-18!15;UBERON:0000200!1.31e-17!6;UBERON:0000369!1.49e-17!4;UBERON:0002435!1.49e-17!4;UBERON:0000204!1.49e-17!4;UBERON:0010082!1.49e-17!4;UBERON:0000064!2.22e-17!219;UBERON:0000477!6.46e-17!286;UBERON:0000483!4.51e-16!309;UBERON:0000119!7.81e-16!312;UBERON:0001896!2.53e-14!3;UBERON:0005290!2.53e-14!3;UBERON:0010096!2.53e-14!3;UBERON:0006331!6.68e-14!3;UBERON:0005383!1.03e-13!3;UBERON:0005382!1.03e-13!3;UBERON:0000988!1.28e-13!3;UBERON:0002771!1.81e-13!3;UBERON:0004733!8.90e-13!12;UBERON:0002028!8.90e-13!12;UBERON:0007277!8.90e-13!12;UBERON:0000475!3.54e-12!365;UBERON:0004732!9.60e-12!13;UBERON:0001897!2.77e-10!2;UBERON:0002148!4.96e-10!2;UBERON:0009662!4.96e-10!2;UBERON:0001876!6.48e-10!2;UBERON:0001873!8.82e-10!2;UBERON:0001875!8.82e-10!2;UBERON:0006514!8.82e-10!2;UBERON:0010122!8.82e-10!2;UBERON:0001954!9.21e-10!2;UBERON:0003022!9.21e-10!2;UBERON:0002421!9.21e-10!2;UBERON:0002600!9.21e-10!2;UBERON:0001870!1.20e-09!2;UBERON:0002021!2.14e-08!5;UBERON:0000062!2.00e-07!511;UBERON:0000481!2.15e-07!347;UBERON:0002240!4.60e-07!3;UBERON:0000923!9.16e-07!604;UBERON:0005291!9.16e-07!604;UBERON:0006598!9.16e-07!604;UBERON:0002532!9.16e-07!604;UBERON:0002050!9.74e-07!605;UBERON:0005423!9.74e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;5.60e-22;6!UBERON:0001896;6.20e-20;3!UBERON:0005290;6.20e-20;3!UBERON:0002240;7.87e-20;3!UBERON:0005174;7.87e-20;3!UBERON:0001137;7.87e-20;3!UBERON:0001893;1.06e-18;34!UBERON:0003528;3.48e-18;34!UBERON:0002020;3.48e-18;34!UBERON:0002780;2.69e-16;41!UBERON:0001890;2.69e-16;41!UBERON:0001017;6.17e-16;75!UBERON:0002336;2.38e-15;1!UBERON:0011215;2.38e-15;1!UBERON:0001018;2.38e-15;1!UBERON:0002473;2.38e-15;1!UBERON:0005340;2.38e-15;1!UBERON:0003544;2.38e-15;1!UBERON:0005970;2.38e-15;1!UBERON:0002316;2.38e-15;1!UBERON:0001020;2.38e-15;1!UBERON:0002437;2.38e-15;1!UBERON:0001869;2.59e-15;32!UBERON:0000125;5.15e-15;9!UBERON:0002308;5.15e-15;9!UBERON:0000073;5.27e-15;53!UBERON:0002616;5.27e-15;53!UBERON:0002420;6.53e-15;9!UBERON:0007245;6.53e-15;9!UBERON:0010009;6.53e-15;9!UBERON:0010011;6.53e-15;9!UBERON:0000454;6.53e-15;9!UBERON:0002791;2.48e-14;32!UBERON:0001016;2.19e-12;83!UBERON:0000349;2.31e-12;5!UBERON:0004733;2.58e-11;12!UBERON:0002028;2.58e-11;12!UBERON:0000955;6.18e-11;68!UBERON:0004732;1.73e-10;13!UBERON:0002619;4.06e-10;22!UBERON:0009663;3.30e-09;7!UBERON:0000956;5.58e-09;25!UBERON:0000203;5.58e-09;25!UBERON:0001897;1.20e-08;2!UBERON:0010225;1.20e-08;2!UBERON:0001873;1.29e-08;2!UBERON:0001954;1.44e-08;2!UBERON:0003022;1.44e-08;2!UBERON:0002421;1.44e-08;2!UBERON:0002600;1.44e-08;2!UBERON:0002148;1.73e-08;2!UBERON:0001875;1.73e-08;2!UBERON:0006331;1.73e-08;2!UBERON:0009662;1.73e-08;2!UBERON:0006514;1.73e-08;2!UBERON:0001876;2.48e-08;2!UBERON:0005162;2.48e-08;2!UBERON:0000122;2.48e-08;2!UBERON:0007023;3.13e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.07e-40,56;UBERON:0005068,1.07e-40,56;UBERON:0006241,1.07e-40,56;UBERON:0007135,1.07e-40,56;UBERON:0001017,3.76e-32,81;UBERON:0000073,1.04e-30,53;UBERON:0002616,1.04e-30,53;UBERON:0001016,6.79e-29,89;UBERON:0003075,1.32e-27,82;UBERON:0007284,1.32e-27,82;UBERON:0002346,2.77e-26,86;UBERON:0003076,1.47e-23,15;UBERON:0003057,1.47e-23,15;UBERON:0000955,1.85e-23,68;UBERON:0006238,1.85e-23,68;UBERON:0002298,5.80e-22,6;UBERON:0010371,1.41e-21,104;UBERON:0002780,5.24e-21,41;UBERON:0001890,5.24e-21,41;UBERON:0003080,5.24e-21,41;UBERON:0006240,5.24e-21,41;UBERON:0001896,6.50e-20,3;UBERON:0005290,6.50e-20,3;UBERON:0010096,6.50e-20,3;UBERON:0007023,8.90e-20,114;UBERON:0002240,1.15e-19,3;UBERON:0005174,1.15e-19,3;UBERON:0001137,1.15e-19,3;UBERON:0003528,1.79e-19,34;UBERON:0002020,1.79e-19,34;UBERON:0001893,2.17e-19,34;UBERON:0010314,8.98e-17,132;UBERON:0002791,2.60e-15,32;UBERON:0001869,2.60e-15,32;UBERON:0002336,3.17e-15,1;UBERON:0011215,3.17e-15,1;UBERON:0001018,3.17e-15,1;UBERON:0002473,3.17e-15,1;UBERON:0005340,3.17e-15,1;UBERON:0003544,3.17e-15,1;UBERON:0005970,3.17e-15,1;UBERON:0002316,3.17e-15,1;UBERON:0001020,3.17e-15,1;UBERON:0002437,3.17e-15,1;UBERON:0000125,4.91e-15,9;UBERON:0002308,4.91e-15,9;UBERON:0002420,5.40e-15,9;UBERON:0007245,5.40e-15,9;UBERON:0010009,5.40e-15,9;UBERON:0010011,5.40e-15,9;UBERON:0000454,5.40e-15,9;UBERON:0004121,1.09e-14,171;UBERON:0000924,1.09e-14,171;UBERON:0006601,1.09e-14,171;UBERON:0003056,5.06e-14,61;UBERON:0000349,2.00e-12,5;UBERON:0004733,2.63e-11,12;UBERON:0002028,2.63e-11,12;UBERON:0007277,2.63e-11,12;UBERON:0000025,3.82e-11,192;UBERON:0011216,6.13e-11,223;UBERON:0004732,1.75e-10,13;UBERON:0002619,3.64e-10,22;UBERON:0009663,3.17e-09,7;UBERON:0000956,5.08e-09,25;UBERON:0000203,5.08e-09,25;UBERON:0001897,1.20e-08,2;UBERON:0010225,1.20e-08,2;UBERON:0004111,1.22e-08,240;UBERON:0001873,1.29e-08,2;UBERON:0010122,1.29e-08,2;UBERON:0001954,1.50e-08,2;UBERON:0003022,1.50e-08,2;UBERON:0002421,1.50e-08,2;UBERON:0002600,1.50e-08,2;UBERON:0001875,1.61e-08,2;UBERON:0006514,1.61e-08,2;UBERON:0002148,1.73e-08,2;UBERON:0006331,1.73e-08,2;UBERON:0009662,1.73e-08,2;UBERON:0001876,2.00e-08,2;UBERON:0005162,2.87e-08,2;UBERON:0000122,2.87e-08,2 | |||
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|short_description=p1@LOC283485 | |||
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Latest revision as of 12:09, 16 September 2015
Short description: | p1@LOC283485 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283485_5end |
Coexpression cluster: | C256_occipital_caudate_amygdala_medial_thalamus_hippocampus_medulla |
Association with transcript: | 350bp_to_AK093862_5end |
EntrezGene: | LOC283485 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data