FFCP PHASE1:Hg19::chr19:19644945..19644969,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:19644945..19644969,+ to FFCP PHASE1:Hg19::chr19:19644945..19644969,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374887 | |EntrezGene=374887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24785 | |HGNC=24785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=455bp_to_AK094976_5end | |||
|cluster_id=chr19:19644945..19644969,+ | |||
|coexpression_cluster_id=C66 | |||
|description=CAGE_peak_3_at_YJEFN3_5end | |||
|id=chr19:19644945..19644969,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.37e-10;82!UBERON:0006215;2.54e-09;3!UBERON:0010122;3.46e-07;2 | |||
|ontology_enrichment_disease=DOID:162!2.47e-12!235;DOID:14566!3.14e-12!239;DOID:0050687!2.04e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.03e-24!57;UBERON:0005068!6.03e-24!57;UBERON:0006241!6.03e-24!57;UBERON:0007135!6.03e-24!57;UBERON:0000955!3.04e-22!69;UBERON:0006238!3.04e-22!69;UBERON:0002780!3.35e-22!41;UBERON:0001890!3.35e-22!41;UBERON:0006240!3.35e-22!41;UBERON:0003080!3.34e-21!42;UBERON:0002616!8.18e-20!59;UBERON:0002020!4.31e-19!34;UBERON:0003528!4.31e-19!34;UBERON:0001017!4.88e-19!82;UBERON:0001893!2.81e-18!34;UBERON:0002791!3.82e-18!33;UBERON:0005743!8.52e-18!86;UBERON:0000073!1.34e-17!94;UBERON:0001016!1.34e-17!94;UBERON:0001869!3.63e-17!32;UBERON:0002346!5.96e-16!90;UBERON:0003075!1.67e-14!86;UBERON:0007284!1.67e-14!86;UBERON:0007023!4.35e-14!115;UBERON:0002619!8.60e-14!22;UBERON:0000956!1.25e-12!25;UBERON:0000203!1.25e-12!25;UBERON:0001950!2.73e-12!20;UBERON:0003056!4.19e-12!61;UBERON:0000153!1.25e-10!129;UBERON:0007811!1.25e-10!129;UBERON:0000033!5.11e-10!123;UBERON:0002420!1.95e-08!9;UBERON:0007245!1.95e-08!9;UBERON:0010009!1.95e-08!9;UBERON:0010011!1.95e-08!9;UBERON:0000454!1.95e-08!9;UBERON:0000924!2.67e-08!173;UBERON:0006601!2.67e-08!173;UBERON:0002308!3.20e-08!9;UBERON:0000125!3.20e-08!9;UBERON:0004121!2.21e-07!169;UBERON:0009663!7.05e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.82e-35;34!UBERON:0002020;1.82e-35;34!UBERON:0002791;2.23e-35;32!UBERON:0001869;1.38e-32;32!UBERON:0002780;2.35e-30;41!UBERON:0001890;2.35e-30;41!UBERON:0001893;4.23e-30;34!UBERON:0000073;4.35e-29;53!UBERON:0002616;4.35e-29;53!UBERON:0002619;3.86e-27;22!UBERON:0002420;2.38e-24;9!UBERON:0007245;2.38e-24;9!UBERON:0010009;2.38e-24;9!UBERON:0010011;2.38e-24;9!UBERON:0000454;2.38e-24;9!UBERON:0000956;1.67e-23;25!UBERON:0000203;1.67e-23;25!UBERON:0000125;1.81e-23;9!UBERON:0002308;1.81e-23;9!UBERON:0001950;1.58e-22;20!UBERON:0009663;4.04e-19;7!UBERON:0000955;1.13e-17;68!UBERON:0001017;5.74e-16;75!UBERON:0000349;2.21e-14;5!UBERON:0001016;1.37e-13;83!UBERON:0000369;3.87e-12;4!UBERON:0002435;3.87e-12;4!UBERON:0000204;3.87e-12;4!UBERON:0004733;4.67e-10;12!UBERON:0002028;4.67e-10;12!UBERON:0005383;5.59e-10;3!UBERON:0005382;5.59e-10;3!UBERON:0001871;6.35e-10;6!UBERON:0004732;3.36e-09;13!UBERON:0002021;4.71e-09;5!UBERON:0000200;1.22e-07;6!UBERON:0002680;2.03e-07;9!UBERON:0001895;2.03e-07;9!UBERON:0001873;3.46e-07;2!UBERON:0002298;5.79e-07;6!UBERON:0001954;5.91e-07;2!UBERON:0003022;5.91e-07;2!UBERON:0002421;5.91e-07;2!UBERON:0002600;5.91e-07;2!UBERON:0001876;6.43e-07;2!UBERON:0002784;7.03e-07;4!UBERON:0001897;7.10e-07;2!UBERON:0010225;7.10e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.54e-51,53;UBERON:0002616,2.54e-51,53;UBERON:0001049,4.28e-48,56;UBERON:0005068,4.28e-48,56;UBERON:0006241,4.28e-48,56;UBERON:0007135,4.28e-48,56;UBERON:0003528,3.67e-44,34;UBERON:0002020,3.67e-44,34;UBERON:0002780,3.97e-42,41;UBERON:0001890,3.97e-42,41;UBERON:0003080,3.97e-42,41;UBERON:0006240,3.97e-42,41;UBERON:0000955,6.05e-40,68;UBERON:0006238,6.05e-40,68;UBERON:0002791,8.33e-40,32;UBERON:0001893,3.85e-37,34;UBERON:0001869,3.20e-36,32;UBERON:0001017,3.54e-34,81;UBERON:0002346,5.86e-34,86;UBERON:0003075,4.71e-32,82;UBERON:0007284,4.71e-32,82;UBERON:0001016,8.37e-32,89;UBERON:0002619,1.12e-27,22;UBERON:0010371,1.50e-26,104;UBERON:0003056,5.51e-26,61;UBERON:0002420,4.99e-25,9;UBERON:0007245,4.99e-25,9;UBERON:0010009,4.99e-25,9;UBERON:0010011,4.99e-25,9;UBERON:0000454,4.99e-25,9;UBERON:0000125,2.75e-24,9;UBERON:0002308,2.75e-24,9;UBERON:0000956,5.68e-24,25;UBERON:0000203,5.68e-24,25;UBERON:0001950,4.71e-23,20;UBERON:0009663,1.03e-19,7;UBERON:0007023,4.44e-19,114;UBERON:0010314,7.02e-19,132;UBERON:0004121,5.35e-17,171;UBERON:0000924,5.35e-17,171;UBERON:0006601,5.35e-17,171;UBERON:0000349,1.62e-14,5;UBERON:0000369,3.19e-12,4;UBERON:0002435,3.19e-12,4;UBERON:0000204,3.19e-12,4;UBERON:0010082,3.19e-12,4;UBERON:0000025,1.80e-11,192;UBERON:0011216,2.02e-11,223;UBERON:0004733,3.09e-10,12;UBERON:0002028,3.09e-10,12;UBERON:0007277,3.09e-10,12;UBERON:0001871,5.12e-10,6;UBERON:0005383,5.58e-10,3;UBERON:0005382,5.58e-10,3;UBERON:0004732,2.31e-09,13;UBERON:0002021,3.85e-09,5;UBERON:0003076,5.73e-08,15;UBERON:0003057,5.73e-08,15;UBERON:0000200,1.18e-07,6;UBERON:0002680,1.32e-07,9;UBERON:0001895,1.32e-07,9;UBERON:0010092,1.32e-07,9;UBERON:0004111,2.50e-07,240;UBERON:0001873,3.44e-07,2;UBERON:0010122,3.44e-07,2;UBERON:0002298,4.33e-07,6;UBERON:0001876,5.31e-07,2;UBERON:0001954,6.30e-07,2;UBERON:0003022,6.30e-07,2;UBERON:0002421,6.30e-07,2;UBERON:0002600,6.30e-07,2;UBERON:0001897,7.06e-07,2;UBERON:0010225,7.06e-07,2;UBERON:0001875,9.36e-07,2;UBERON:0006514,9.36e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.458480434487708,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0.619737604642413,1.27952309238679,0,0,0.401088894940283,0.434021741431704,0,0,0,0.581592955118259,0,0.242584061187816,0,0.822335776043652,0.619412741790207,0.575384784644301,0.768482119587302,0.236482229888585,0,0.645484683583826,2.70852973188684,0.564727018627814,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0.852449501065388,0.870627715885752,0.56738522469114,0,0.75374599577023,0.521482918420201,0.217188844705117,1.21079900526674,0,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0.260118695119756,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.759059076058509,0,0,0.950452044448374,0,0,0,0,0,0,0.534880391567015,0.868946423296794,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.348259474598534,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,1.19168262731897,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,1.07633781413317,0,0,0.600182192168805,0,0,0,0.168776332241266,0,1.00973509697646,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.365921118388786,0.265059536642971,0.580969714347592,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.674338760312407,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.761016608938393,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0.144781306667579,0.410952645100767,0,0.224170287987055,0,0.646882724578552,0.513372145118994,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0.184161977871793,0.229628896329213,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.618246069886334,0.27470839445503,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0.638063562472921,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0,1.11481905075431,0.721346064882224,0.497992903438899,0.637705090915289,0.798317485731266,0,1.2700414963433,0,0.280797178113459,2.05411211129873,0.313359791546046,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0.687010689511529,0.307240764308458,0.894704431569664,0,0.19538809540204,0.278406173895242,0,0.811367035427949,0,0,0.561421621224659,0.293016358543788,0.485442086998054,0.111443384277478,0,0,0,0,2.98244294329889,4.22008249231538,1.22439575525196,0.659215496907038,0.844501632511974,0.19924798825107,0.276283915531148,0.503865495708552,0.102268682502155,0.246169610922139,0,0.359473404589307,0.537063524026827,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0.520855522170466,0.349839999984783,0,0.341380344856499,0.254253650292766,0,0.689486746482929,0,2.08349993919951,4.42870692906919,9.28592577415641,3.05163472634166,9.62039561401654,1.47773809476774,0.438770794307945,0.21787692703798,0.139423744278603,0.230850775511391,0.455768223388005,0.23056390438806,0.987334088507493,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0.421996129056054,0,0,0,0,0.176915129006678,0.611030144933625,0.593042257361244,0,0.208843899010911,0.606610196826093,0,0.702793337176017,2.55436704901932,0,1.21390189767046,0.394584402849391,0,1.83643656978294,0,0.300646838828985,0.622129148383483,0,0,0,0,0.284609546029793,1.10939738410511,0.520679215005393,0,0.174118413160805,0.873633341210151,1.20390222730132,0.19351266257817,0.292357268344742,0.0821154570532092,0,0.353024506766001,0,0.548167698587004,0,0.443175571691151,1.17330829640882,0,0.213452994739353,2.19790570540343,0.432271251462318,0,0.857974989309823,1.29649318189335,0.248505071130865,0.235694034616795,0.135904206073614,0.627617077873999,0.407992870545287,0.866851769704557,1.80126086612937,3.9702559878678,0,0.429765441419957,0,0,2.06244381610515,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|short_description=p3@YJEFN3 | |||
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Latest revision as of 20:16, 16 September 2015
Short description: | p3@YJEFN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YJEFN3_5end |
Coexpression cluster: | C66_cerebellum_middle_occipital_parietal_medial_amygdala_hippocampus |
Association with transcript: | 455bp_to_AK094976_5end |
EntrezGene: | YJEFN3 |
HGNC: | 24785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data