FFCP PHASE1:Hg19::chr20:21503356..21503373,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:21503356..21503373,- to FFCP PHASE1:Hg19::chr20:21503356..21503373,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:21503356..21503373,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr20:21503356..21503373,- | |||
|id=chr20:21503356..21503373,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.56e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.56e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.97e-14;1!UBERON:0005425;1.97e-14;1!UBERON:0006601;3.76e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;8.31e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,8.32e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.03e-70!57;UBERON:0005068!4.03e-70!57;UBERON:0006241!4.03e-70!57;UBERON:0007135!4.03e-70!57;UBERON:0002616!7.68e-60!59;UBERON:0000955!1.18e-58!69;UBERON:0006238!1.18e-58!69;UBERON:0001017!1.40e-56!82;UBERON:0005743!1.62e-53!86;UBERON:0002780!4.21e-52!41;UBERON:0001890!4.21e-52!41;UBERON:0006240!4.21e-52!41;UBERON:0002346!3.15e-51!90;UBERON:0003080!1.04e-50!42;UBERON:0000073!2.60e-50!94;UBERON:0001016!2.60e-50!94;UBERON:0003075!1.84e-48!86;UBERON:0007284!1.84e-48!86;UBERON:0007023!1.25e-42!115;UBERON:0001893!1.99e-41!34;UBERON:0002020!2.25e-41!34;UBERON:0003528!2.25e-41!34;UBERON:0002791!5.62e-39!33;UBERON:0001869!3.29e-36!32;UBERON:0003056!7.99e-33!61;UBERON:0002619!3.68e-31!22;UBERON:0000033!6.42e-29!123;UBERON:0000924!1.39e-28!173;UBERON:0006601!1.39e-28!173;UBERON:0000153!3.91e-27!129;UBERON:0007811!3.91e-27!129;UBERON:0000956!4.33e-27!25;UBERON:0000203!4.33e-27!25;UBERON:0004121!1.96e-26!169;UBERON:0001950!4.33e-26!20;UBERON:0003076!1.19e-19!15;UBERON:0003057!1.19e-19!15;UBERON:0002298!2.73e-19!8;UBERON:0004732!9.98e-19!13;UBERON:0000025!3.58e-17!194;UBERON:0002308!4.56e-16!9;UBERON:0000125!4.56e-16!9;UBERON:0004733!5.12e-16!12;UBERON:0002028!5.12e-16!12;UBERON:0007277!5.12e-16!12;UBERON:0001894!5.39e-12!7;UBERON:0006222!5.39e-12!7;UBERON:0004111!6.69e-12!241;UBERON:0002420!1.26e-11!9;UBERON:0007245!1.26e-11!9;UBERON:0010009!1.26e-11!9;UBERON:0010011!1.26e-11!9;UBERON:0000454!1.26e-11!9;UBERON:0009663!8.49e-11!7;UBERON:0001896!9.76e-11!3;UBERON:0005290!9.76e-11!3;UBERON:0010096!9.76e-11!3;UBERON:0002021!1.73e-10!5;UBERON:0006331!2.05e-10!3;UBERON:0000064!2.33e-10!219;UBERON:0000988!3.20e-10!3;UBERON:0000349!4.73e-10!5;UBERON:0000483!7.83e-10!309;UBERON:0000119!1.22e-09!312;UBERON:0001871!1.54e-09!7;UBERON:0000477!3.24e-09!286;UBERON:0002680!1.34e-08!9;UBERON:0001895!1.34e-08!9;UBERON:0010092!1.34e-08!9;UBERON:0000200!1.88e-08!6;UBERON:0000007!3.51e-08!2;UBERON:0005162!6.88e-08!2;UBERON:0000122!6.88e-08!2;UBERON:0002148!2.02e-07!2;UBERON:0009662!2.02e-07!2;UBERON:0000062!2.29e-07!511;UBERON:0001954!2.30e-07!2;UBERON:0003022!2.30e-07!2;UBERON:0002421!2.30e-07!2;UBERON:0002600!2.30e-07!2;UBERON:0000475!2.55e-07!365;UBERON:0001897!2.61e-07!2;UBERON:0001875!3.81e-07!2;UBERON:0006514!3.81e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.41e-28;2!UBERON:0005162;4.67e-27;2!UBERON:0000122;4.67e-27;2!UBERON:0001894;8.07e-18;7!UBERON:0003296;1.61e-14;4!UBERON:0010133;1.61e-14;4!UBERON:0002336;1.97e-14;1!UBERON:0000941;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0011215;1.97e-14;1!UBERON:0001018;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0002473;1.97e-14;1!UBERON:0005340;1.97e-14;1!UBERON:0003544;1.97e-14;1!UBERON:0005970;1.97e-14;1!UBERON:0002316;1.97e-14;1!UBERON:0001020;1.97e-14;1!UBERON:0002437;1.97e-14;1!UBERON:0000073;1.43e-10;53!UBERON:0002616;1.43e-10;53!UBERON:0002780;2.70e-10;41!UBERON:0001890;2.70e-10;41!UBERON:0000002;5.43e-10;6!UBERON:0001560;5.43e-10;6!UBERON:0000955;5.74e-10;68!UBERON:0004732;9.76e-10;13!UBERON:0006955;3.56e-08;2!UBERON:0004801;3.56e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0001017;1.38e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.41e-28,2;UBERON:0005162,7.96e-27,2;UBERON:0000122,7.96e-27,2;UBERON:0001894,6.99e-18,7;UBERON:0006222,6.99e-18,7;UBERON:0001049,8.18e-18,56;UBERON:0005068,8.18e-18,56;UBERON:0006241,8.18e-18,56;UBERON:0007135,8.18e-18,56;UBERON:0001016,4.27e-16,89;UBERON:0000073,6.40e-15,53;UBERON:0002616,6.40e-15,53;UBERON:0001017,8.39e-15,81;UBERON:0003075,8.93e-15,82;UBERON:0007284,8.93e-15,82;UBERON:0003296,1.61e-14,4;UBERON:0010133,1.61e-14,4;UBERON:0000941,2.11e-14,1;UBERON:0001785,2.11e-14,1;UBERON:0002464,2.11e-14,1;UBERON:0004904,2.11e-14,1;UBERON:0001021,2.11e-14,1;UBERON:0003902,2.11e-14,1;UBERON:0005425,2.11e-14,1;UBERON:0000955,2.33e-14,68;UBERON:0006238,2.33e-14,68;UBERON:0002336,3.15e-14,1;UBERON:0011215,3.15e-14,1;UBERON:0001018,3.15e-14,1;UBERON:0002473,3.15e-14,1;UBERON:0005340,3.15e-14,1;UBERON:0003544,3.15e-14,1;UBERON:0005970,3.15e-14,1;UBERON:0002316,3.15e-14,1;UBERON:0001020,3.15e-14,1;UBERON:0002437,3.15e-14,1;UBERON:0002346,4.80e-14,86;UBERON:0010371,1.91e-11,104;UBERON:0002780,4.39e-11,41;UBERON:0001890,4.39e-11,41;UBERON:0003080,4.39e-11,41;UBERON:0006240,4.39e-11,41;UBERON:0007023,1.79e-10,114;UBERON:0000002,5.43e-10,6;UBERON:0001560,5.43e-10,6;UBERON:0003056,6.37e-10,61;UBERON:0004732,1.10e-09,13;UBERON:0010314,8.67e-09,132;UBERON:0003076,1.78e-08,15;UBERON:0003057,1.78e-08,15;UBERON:0006955,3.56e-08,2;UBERON:0004801,3.56e-08,2;UBERON:0004121,6.84e-08,171;UBERON:0000924,6.84e-08,171;UBERON:0006601,6.84e-08,171;UBERON:0003714,7.52e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,17.383359601945,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.07841812769083,0,1.87411556580271,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,4.11827994868715,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,2.29363678276028,0.554645257684261,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.123935764259002,0,0,0,0,0,0,0.256916900385838,2.8339315265117,0.319267718114302,0.41023272848151,0,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.760989722326882,0,0,0,0,0,0,0,3.64179362541979,3.18727067891817,0,0,0,0.40781839786099,0.460409414939944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57333409808316,1.79055697645231,0,0,0,0.754814217833368,0.0771741581079447,0,0.470317296361523,0,0,1.57046773691956,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,0,0.716697915757256,0.315543124386369,0.339957450954573,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,17.383359601945,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.07841812769083,0,1.87411556580271,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,4.11827994868715,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,2.29363678276028,0.554645257684261,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.123935764259002,0,0,0,0,0,0,0.256916900385838,2.8339315265117,0.319267718114302,0.41023272848151,0,0.276629009856872,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.760989722326882,0,0,0,0,0,0,0,3.64179362541979,3.18727067891817,0,0,0,0.40781839786099,0.460409414939944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57333409808316,1.79055697645231,0,0,0,0.754814217833368,0.0771741581079447,0,0.470317296361523,0,0,1.57046773691956,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,0,0.716697915757256,0.315543124386369,0.339957450954573,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:21503356..21503373,- | |||
}} | }} |
Latest revision as of 12:24, 28 July 2015
Short description: | p@chr20:21503356..21503373, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21503356..21503373, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 8.32e-12 | 5 |