FFCP PHASE1:Hg19::chr3:123813592..123813615,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:123813592..123813615,+ to FFCP PHASE1:Hg19::chr3:123813592..123813615,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483658_5end | |||
|cluster_id=chr3:123813592..123813615,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_KALRN_5end | |||
|id=chr3:123813592..123813615,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.68e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.21e-82!57;UBERON:0005068!1.21e-82!57;UBERON:0006241!1.21e-82!57;UBERON:0007135!1.21e-82!57;UBERON:0002780!2.12e-81!41;UBERON:0001890!2.12e-81!41;UBERON:0006240!2.12e-81!41;UBERON:0001893!3.27e-80!34;UBERON:0002020!8.44e-80!34;UBERON:0003528!8.44e-80!34;UBERON:0003080!2.47e-79!42;UBERON:0002791!2.13e-76!33;UBERON:0002616!3.70e-75!59;UBERON:0000955!2.88e-74!69;UBERON:0006238!2.88e-74!69;UBERON:0001869!1.59e-73!32;UBERON:0001017!3.53e-72!82;UBERON:0005743!1.74e-68!86;UBERON:0007023!6.86e-65!115;UBERON:0002619!3.45e-62!22;UBERON:0000073!2.74e-61!94;UBERON:0001016!2.74e-61!94;UBERON:0003075!9.67e-59!86;UBERON:0007284!9.67e-59!86;UBERON:0002346!8.95e-56!90;UBERON:0001950!1.83e-54!20;UBERON:0000956!1.92e-54!25;UBERON:0000203!1.92e-54!25;UBERON:0003056!9.92e-53!61;UBERON:0000033!8.02e-41!123;UBERON:0000153!1.52e-38!129;UBERON:0007811!1.52e-38!129;UBERON:0004121!1.40e-30!169;UBERON:0000924!1.12e-29!173;UBERON:0006601!1.12e-29!173;UBERON:0002420!3.01e-27!9;UBERON:0007245!3.01e-27!9;UBERON:0010009!3.01e-27!9;UBERON:0010011!3.01e-27!9;UBERON:0000454!3.01e-27!9;UBERON:0002308!1.55e-26!9;UBERON:0000125!1.55e-26!9;UBERON:0000200!4.08e-25!6;UBERON:0000349!5.60e-21!5;UBERON:0000025!5.99e-20!194;UBERON:0009663!7.41e-20!7;UBERON:0001871!1.24e-18!7;UBERON:0002298!2.57e-16!8;UBERON:0004111!1.75e-15!241;UBERON:0001872!6.70e-14!5;UBERON:0002021!1.02e-13!5;UBERON:0002771!1.61e-13!3;UBERON:0000477!1.17e-12!286;UBERON:0000988!5.94e-12!3;UBERON:0006331!8.73e-12!3;UBERON:0000064!2.01e-11!219;UBERON:0000483!4.85e-11!309;UBERON:0000119!7.50e-11!312;UBERON:0000369!7.54e-10!4;UBERON:0002435!7.54e-10!4;UBERON:0000204!7.54e-10!4;UBERON:0010082!7.54e-10!4;UBERON:0001870!1.36e-09!2;UBERON:0001954!1.36e-09!2;UBERON:0003022!1.36e-09!2;UBERON:0002421!1.36e-09!2;UBERON:0002600!1.36e-09!2;UBERON:0001876!2.74e-09!2;UBERON:0000007!8.84e-09!2;UBERON:0000475!9.14e-09!365;UBERON:0001875!9.95e-09!2;UBERON:0006514!9.95e-09!2;UBERON:0002360!1.12e-08!2;UBERON:0000094!1.12e-08!2;UBERON:0007645!1.12e-08!2;UBERON:0002148!1.79e-08!2;UBERON:0009662!1.79e-08!2;UBERON:0003076!1.89e-08!15;UBERON:0003057!1.89e-08!15;UBERON:0000062!3.30e-08!511;UBERON:0004733!1.24e-07!12;UBERON:0002028!1.24e-07!12;UBERON:0007277!1.24e-07!12;UBERON:0004732!5.02e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.71e-110;22!UBERON:0001869;1.31e-106;32!UBERON:0002791;1.03e-98;32!UBERON:0001893;7.06e-98;34!UBERON:0000956;9.92e-97;25!UBERON:0000203;9.92e-97;25!UBERON:0001950;4.34e-96;20!UBERON:0003528;3.85e-91;34!UBERON:0002020;3.85e-91;34!UBERON:0002780;4.33e-66;41!UBERON:0001890;4.33e-66;41!UBERON:0000200;4.33e-43;6!UBERON:0000073;4.53e-39;53!UBERON:0002616;4.53e-39;53!UBERON:0000349;1.14e-35;5!UBERON:0000955;1.60e-27;68!UBERON:0002420;1.79e-27;9!UBERON:0007245;1.79e-27;9!UBERON:0010009;1.79e-27;9!UBERON:0010011;1.79e-27;9!UBERON:0000454;1.79e-27;9!UBERON:0001017;2.06e-26;75!UBERON:0001871;1.16e-25;6!UBERON:0001872;1.51e-23;5!UBERON:0002021;3.92e-23;5!UBERON:0001870;1.22e-22;3!UBERON:0001016;6.82e-18;83!UBERON:0000369;2.19e-16;4!UBERON:0002435;2.19e-16;4!UBERON:0000204;2.19e-16;4!UBERON:0009663;3.69e-16;7!UBERON:0001954;1.20e-15;2!UBERON:0003022;1.20e-15;2!UBERON:0002421;1.20e-15;2!UBERON:0002600;1.20e-15;2!UBERON:0002771;1.45e-15;2!UBERON:0002702;1.45e-15;2!UBERON:0001876;4.14e-15;2!UBERON:0000125;1.29e-12;9!UBERON:0002308;1.29e-12;9!UBERON:0007023;1.44e-11;114!UBERON:0005383;3.01e-10;3!UBERON:0005382;3.01e-10;3!UBERON:0011216;3.00e-09;132!UBERON:0002022;6.03e-09;1!UBERON:0002581;1.23e-08;1!UBERON:0002902;1.23e-08;1!UBERON:0009899;1.23e-08;1!UBERON:0007190;1.23e-08;1!UBERON:0001882;1.77e-08;1!UBERON:0003112;1.77e-08;1!UBERON:0011158;1.77e-08;1!UBERON:0003128;1.77e-08;1!UBERON:0005403;1.77e-08;1!UBERON:0001703;1.77e-08;1!UBERON:0002241;1.77e-08;1!UBERON:0001874;2.64e-08;1!UBERON:0010314;5.66e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.58e-121,32;UBERON:0001893,6.31e-114,34;UBERON:0002791,6.83e-111,32;UBERON:0002619,7.51e-110,22;UBERON:0003528,2.45e-104,34;UBERON:0002020,2.45e-104,34;UBERON:0000956,8.70e-97,25;UBERON:0000203,8.70e-97,25;UBERON:0001950,3.87e-96,20;UBERON:0002780,2.74e-94,41;UBERON:0001890,2.74e-94,41;UBERON:0003080,2.74e-94,41;UBERON:0006240,2.74e-94,41;UBERON:0000073,1.86e-72,53;UBERON:0002616,1.86e-72,53;UBERON:0001049,1.96e-68,56;UBERON:0005068,1.96e-68,56;UBERON:0006241,1.96e-68,56;UBERON:0007135,1.96e-68,56;UBERON:0003056,1.36e-62,61;UBERON:0000955,7.30e-60,68;UBERON:0006238,7.30e-60,68;UBERON:0001017,3.95e-54,81;UBERON:0001016,1.99e-48,89;UBERON:0003075,9.91e-46,82;UBERON:0007284,9.91e-46,82;UBERON:0002346,1.94e-43,86;UBERON:0000200,5.01e-43,6;UBERON:0007023,3.23e-38,114;UBERON:0000349,1.02e-35,5;UBERON:0010371,2.75e-35,104;UBERON:0010314,1.52e-29,132;UBERON:0002420,1.88e-27,9;UBERON:0007245,1.88e-27,9;UBERON:0010009,1.88e-27,9;UBERON:0010011,1.88e-27,9;UBERON:0000454,1.88e-27,9;UBERON:0001871,1.05e-25,6;UBERON:0004121,1.38e-23,171;UBERON:0000924,1.38e-23,171;UBERON:0006601,1.38e-23,171;UBERON:0001872,1.60e-23,5;UBERON:0002021,3.40e-23,5;UBERON:0001870,1.36e-22,3;UBERON:0011216,1.08e-18,223;UBERON:0000025,2.88e-17,192;UBERON:0000369,2.25e-16,4;UBERON:0002435,2.25e-16,4;UBERON:0000204,2.25e-16,4;UBERON:0010082,2.25e-16,4;UBERON:0009663,3.92e-16,7;UBERON:0001954,1.16e-15,2;UBERON:0003022,1.16e-15,2;UBERON:0002421,1.16e-15,2;UBERON:0002600,1.16e-15,2;UBERON:0002771,1.25e-15,2;UBERON:0002702,1.67e-15,2;UBERON:0001876,3.99e-15,2;UBERON:0004111,5.79e-13,240;UBERON:0000125,1.35e-12,9;UBERON:0002308,1.35e-12,9;UBERON:0005383,3.16e-10,3;UBERON:0005382,3.16e-10,3;UBERON:0000483,3.15e-09,306;UBERON:0000119,4.28e-09,309;UBERON:0002022,6.03e-09,1;UBERON:0002902,9.46e-09,1;UBERON:0009899,9.46e-09,1;UBERON:0007190,1.18e-08,1;UBERON:0002581,1.48e-08,1;UBERON:0001882,1.71e-08,1;UBERON:0005403,1.71e-08,1;UBERON:0003112,1.84e-08,1;UBERON:0011158,1.84e-08,1;UBERON:0003128,1.84e-08,1;UBERON:0001703,1.84e-08,1;UBERON:0002241,1.84e-08,1;UBERON:0004761,1.84e-08,1;UBERON:0009617,1.84e-08,1;UBERON:0001874,2.84e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,6.33012373847307,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0.969332746095218,3.24688343566479,0,0,0,0,0,0,0,0,0,0,0,2.17073589525734,0,0,0,2.4132393686937,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74752658790234,4.08610218334727,0,0,0,0,0,8.56568748878148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2024772597689,6.9554970994119,6.88550118885749,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49814649913135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84485948377782,7.08482881627925,4.31011419454308,1.23069818544453,0,6.98488249888601,5.00574501458738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82129604645786,1.56215619722769,7.64741147054381,8.3708869455957,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.475788130837822,6.24841348847066,0,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,7.27508945042787,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977931553462932,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,6.33012373847307,0,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0.969332746095218,3.24688343566479,0,0,0,0,0,0,0,0,0,0,0,2.17073589525734,0,0,0,2.4132393686937,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74752658790234,4.08610218334727,0,0,0,0,0,8.56568748878148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2024772597689,6.9554970994119,6.88550118885749,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49814649913135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84485948377782,7.08482881627925,4.31011419454308,1.23069818544453,0,6.98488249888601,5.00574501458738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82129604645786,1.56215619722769,7.64741147054381,8.3708869455957,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0.475788130837822,6.24841348847066,0,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,7.27508945042787,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977931553462932,0.813792356631477,0,0,0 | ||
|short_description=p9@KALRN | |||
}} | }} |
Latest revision as of 02:13, 20 September 2015
Short description: | p9@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KALRN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000483658_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data