FFCP PHASE1:Hg19::chr3:58552163..58552174,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:58552163..58552174,- to FFCP PHASE1:Hg19::chr3:58552163..58552174,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:58552163..58552174,- | |||
|coexpression_cluster_id=C550 | |||
|description=CAGE_peak_at_chr3:58552163..58552174,- | |||
|id=chr3:58552163..58552174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.62e-18;3!UBERON:0003057;1.62e-18;3!UBERON:0006601;8.32e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.53e-75!57;UBERON:0005068!2.53e-75!57;UBERON:0006241!2.53e-75!57;UBERON:0007135!2.53e-75!57;UBERON:0007023!2.00e-65!115;UBERON:0002616!1.20e-60!59;UBERON:0003075!1.35e-57!86;UBERON:0007284!1.35e-57!86;UBERON:0001017!2.01e-57!82;UBERON:0005743!5.00e-57!86;UBERON:0002346!1.42e-54!90;UBERON:0002780!1.79e-53!41;UBERON:0001890!1.79e-53!41;UBERON:0006240!1.79e-53!41;UBERON:0000955!5.62e-53!69;UBERON:0006238!5.62e-53!69;UBERON:0003080!4.78e-52!42;UBERON:0001893!1.25e-51!34;UBERON:0002020!1.37e-51!34;UBERON:0003528!1.37e-51!34;UBERON:0000073!1.07e-50!94;UBERON:0001016!1.07e-50!94;UBERON:0002791!4.14e-49!33;UBERON:0001869!4.17e-46!32;UBERON:0002619!7.53e-37!22;UBERON:0003056!3.43e-36!61;UBERON:0000956!4.60e-32!25;UBERON:0000203!4.60e-32!25;UBERON:0001950!3.35e-31!20;UBERON:0000033!5.75e-31!123;UBERON:0000153!4.53e-29!129;UBERON:0007811!4.53e-29!129;UBERON:0004121!1.43e-26!169;UBERON:0000924!1.04e-25!173;UBERON:0006601!1.04e-25!173;UBERON:0000025!9.95e-25!194;UBERON:0003076!1.58e-23!15;UBERON:0003057!1.58e-23!15;UBERON:0002420!1.26e-22!9;UBERON:0007245!1.26e-22!9;UBERON:0010009!1.26e-22!9;UBERON:0010011!1.26e-22!9;UBERON:0000454!1.26e-22!9;UBERON:0004111!4.56e-22!241;UBERON:0002308!8.17e-22!9;UBERON:0000125!8.17e-22!9;UBERON:0000200!1.54e-19!6;UBERON:0000477!1.01e-18!286;UBERON:0002298!1.51e-18!8;UBERON:0000349!1.18e-16!5;UBERON:0009663!1.93e-16!7;UBERON:0004733!1.45e-15!12;UBERON:0002028!1.45e-15!12;UBERON:0007277!1.45e-15!12;UBERON:0001871!5.35e-15!7;UBERON:0004732!2.94e-14!13;UBERON:0000483!1.13e-13!309;UBERON:0000119!1.98e-13!312;UBERON:0000369!4.17e-13!4;UBERON:0002435!4.17e-13!4;UBERON:0000204!4.17e-13!4;UBERON:0010082!4.17e-13!4;UBERON:0000064!3.91e-11!219;UBERON:0002771!4.05e-11!3;UBERON:0005383!1.15e-10!3;UBERON:0005382!1.15e-10!3;UBERON:0002240!1.19e-10!3;UBERON:0001896!2.24e-10!3;UBERON:0005290!2.24e-10!3;UBERON:0010096!2.24e-10!3;UBERON:0006331!3.08e-10!3;UBERON:0000988!1.31e-09!3;UBERON:0000475!3.58e-09!365;UBERON:0000062!6.77e-09!511;UBERON:0002680!2.04e-08!9;UBERON:0001895!2.04e-08!9;UBERON:0010092!2.04e-08!9;UBERON:0000467!3.24e-08!625;UBERON:0000480!3.52e-08!626;UBERON:0001876!4.63e-08!2;UBERON:0001954!7.38e-08!2;UBERON:0003022!7.38e-08!2;UBERON:0002421!7.38e-08!2;UBERON:0002600!7.38e-08!2;UBERON:0001873!1.24e-07!2;UBERON:0010122!1.24e-07!2;UBERON:0001870!2.85e-07!2;UBERON:0001905!3.14e-07!2;UBERON:0002757!3.14e-07!2;UBERON:0010134!3.14e-07!2;UBERON:0002784!3.14e-07!2;UBERON:0005408!3.14e-07!2;UBERON:0001899!3.14e-07!2;UBERON:0002148!4.02e-07!2;UBERON:0009662!4.02e-07!2;UBERON:0000923!4.41e-07!604;UBERON:0005291!4.41e-07!604;UBERON:0006598!4.41e-07!604;UBERON:0002532!4.41e-07!604;UBERON:0000468!4.62e-07!659;UBERON:0002050!4.78e-07!605;UBERON:0005423!4.78e-07!605;UBERON:0000922!8.31e-07!612;UBERON:0000481!8.49e-07!347;UBERON:0002360!8.65e-07!2;UBERON:0000094!8.65e-07!2;UBERON:0007645!8.65e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.61e-36;22!UBERON:0002791;9.99e-33;32!UBERON:0000956;6.27e-32;25!UBERON:0000203;6.27e-32;25!UBERON:0001871;9.70e-31;6!UBERON:0001950;2.44e-30;20!UBERON:0001893;3.68e-30;34!UBERON:0003528;1.55e-28;34!UBERON:0002020;1.55e-28;34!UBERON:0002771;1.22e-27;2!UBERON:0001876;1.22e-27;2!UBERON:0001869;4.11e-27;32!UBERON:0002780;1.37e-25;41!UBERON:0001890;1.37e-25;41!UBERON:0000349;7.99e-25;5!UBERON:0002420;7.98e-24;9!UBERON:0007245;7.98e-24;9!UBERON:0010009;7.98e-24;9!UBERON:0010011;7.98e-24;9!UBERON:0000454;7.98e-24;9!UBERON:0000200;1.52e-20;6!UBERON:0000073;8.40e-20;53!UBERON:0002616;8.40e-20;53!UBERON:0002240;1.62e-18;3!UBERON:0005174;1.62e-18;3!UBERON:0001137;1.62e-18;3!UBERON:0002038;1.61e-14;1!UBERON:0003112;1.61e-14;1!UBERON:0011158;1.61e-14;1!UBERON:0009661;1.61e-14;1!UBERON:0002950;1.61e-14;1!UBERON:0003128;1.61e-14;1!UBERON:0001891;1.61e-14;1!UBERON:0001703;1.61e-14;1!UBERON:0002241;1.61e-14;1!UBERON:0001016;2.70e-13;83!UBERON:0001017;9.54e-13;75!UBERON:0000955;1.45e-09;68!UBERON:0009663;1.78e-08;7!UBERON:0011216;1.91e-08;132!UBERON:0001954;3.56e-08;2!UBERON:0003022;3.56e-08;2!UBERON:0002421;3.56e-08;2!UBERON:0002600;3.56e-08;2!UBERON:0001897;4.08e-08;2!UBERON:0010225;4.08e-08;2!UBERON:0002702;6.57e-08;2!UBERON:0001875;6.57e-08;2!UBERON:0006514;6.57e-08;2!UBERON:0000125;8.83e-07;9!UBERON:0002308;8.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,5.16e-39,32;UBERON:0001049,7.69e-38,56;UBERON:0005068,7.69e-38,56;UBERON:0006241,7.69e-38,56;UBERON:0007135,7.69e-38,56;UBERON:0002780,5.40e-37,41;UBERON:0001890,5.40e-37,41;UBERON:0003080,5.40e-37,41;UBERON:0006240,5.40e-37,41;UBERON:0003528,9.87e-37,34;UBERON:0002020,9.87e-37,34;UBERON:0001893,9.87e-37,34;UBERON:0002619,3.46e-36,22;UBERON:0000956,6.03e-32,25;UBERON:0000203,6.03e-32,25;UBERON:0001869,1.25e-31,32;UBERON:0001871,5.69e-31,6;UBERON:0001950,2.34e-30,20;UBERON:0001017,8.49e-30,81;UBERON:0000073,1.56e-28,53;UBERON:0002616,1.56e-28,53;UBERON:0001876,7.10e-28,2;UBERON:0002771,8.13e-28,2;UBERON:0001016,9.49e-27,89;UBERON:0000955,5.92e-26,68;UBERON:0006238,5.92e-26,68;UBERON:0003075,1.39e-25,82;UBERON:0007284,1.39e-25,82;UBERON:0000349,5.80e-25,5;UBERON:0003056,1.05e-24,61;UBERON:0002346,2.41e-24,86;UBERON:0002420,5.95e-24,9;UBERON:0007245,5.95e-24,9;UBERON:0010009,5.95e-24,9;UBERON:0010011,5.95e-24,9;UBERON:0000454,5.95e-24,9;UBERON:0007023,2.53e-21,114;UBERON:0000200,1.52e-20,6;UBERON:0010371,6.17e-20,104;UBERON:0002240,1.62e-18,3;UBERON:0005174,1.62e-18,3;UBERON:0001137,1.62e-18,3;UBERON:0010314,4.68e-18,132;UBERON:0002038,1.61e-14,1;UBERON:0009661,1.61e-14,1;UBERON:0002950,1.61e-14,1;UBERON:0001891,1.61e-14,1;UBERON:0009616,1.61e-14,1;UBERON:0010286,1.61e-14,1;UBERON:0003112,2.11e-14,1;UBERON:0011158,2.11e-14,1;UBERON:0003128,2.11e-14,1;UBERON:0001703,2.11e-14,1;UBERON:0002241,2.11e-14,1;UBERON:0004761,2.11e-14,1;UBERON:0009617,2.11e-14,1;UBERON:0004121,1.90e-13,171;UBERON:0000924,1.90e-13,171;UBERON:0006601,1.90e-13,171;UBERON:0011216,1.32e-11,223;UBERON:0000025,3.64e-10,192;UBERON:0009663,1.72e-08,7;UBERON:0001954,3.56e-08,2;UBERON:0003022,3.56e-08,2;UBERON:0002421,3.56e-08,2;UBERON:0002600,3.56e-08,2;UBERON:0001897,3.82e-08,2;UBERON:0010225,3.82e-08,2;UBERON:0001875,6.15e-08,2;UBERON:0006514,6.15e-08,2;UBERON:0005253,7.52e-08,2;UBERON:0002702,8.04e-08,2;UBERON:0004111,8.08e-08,240;UBERON:0000125,8.59e-07,9;UBERON:0002308,8.59e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.774054819518572,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,3.54128855890097,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.68457782784319,1.251909307065,0.573409195690071,0.887432412294818,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.75597244962866,0.41023272848151,0,0.138314504928436,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,1.03343398250592,0.317079050969534,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.135939465953663,0.526182188502793,0,0,0,0.942693539496011,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.18818560130834,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,1.57673541466596,0,0.475940431336403,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,2.68925789240928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.774054819518572,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,3.54128855890097,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.68457782784319,1.251909307065,0.573409195690071,0.887432412294818,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,1.75597244962866,0.41023272848151,0,0.138314504928436,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,1.03343398250592,0.317079050969534,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.135939465953663,0.526182188502793,0,0,0,0.942693539496011,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.18818560130834,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,1.57673541466596,0,0.475940431336403,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,2.68925789240928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:58552163..58552174,- | |||
}} | }} |
Latest revision as of 22:57, 29 July 2015
Short description: | p@chr3:58552163..58552174, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:58552163..58552174, - |
Coexpression cluster: | C550_hippocampus_amygdala_globus_medial_occipital_thalamus_middle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data