FFCP PHASE1:Hg19::chr3:9291307..9291344,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:9291307..9291344,- to FFCP PHASE1:Hg19::chr3:9291307..9291344,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9901 | |EntrezGene=9901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19744 | |HGNC=19744 | ||
|TSSclassifier=strong | |||
|UniProt=O43295 | |UniProt=O43295 | ||
|association_with_transcript=0bp_to_NM_001033117,NM_014850,uc003brf.1,uc003brg.1,uc003brk.2_5end | |||
|cluster_id=chr3:9291307..9291344,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SRGAP3_5end | |||
|id=chr3:9291307..9291344,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.72e-35!115;UBERON:0001017!1.68e-33!82;UBERON:0001049!3.35e-32!57;UBERON:0005068!3.35e-32!57;UBERON:0006241!3.35e-32!57;UBERON:0007135!3.35e-32!57;UBERON:0005743!1.10e-31!86;UBERON:0000073!1.21e-28!94;UBERON:0001016!1.21e-28!94;UBERON:0000955!2.18e-27!69;UBERON:0006238!2.18e-27!69;UBERON:0002616!8.04e-27!59;UBERON:0002780!5.98e-25!41;UBERON:0001890!5.98e-25!41;UBERON:0006240!5.98e-25!41;UBERON:0003080!8.59e-25!42;UBERON:0000153!7.39e-24!129;UBERON:0007811!7.39e-24!129;UBERON:0000033!6.08e-23!123;UBERON:0000924!1.35e-22!173;UBERON:0006601!1.35e-22!173;UBERON:0004121!1.78e-22!169;UBERON:0001893!9.84e-22!34;UBERON:0002020!1.53e-21!34;UBERON:0003528!1.53e-21!34;UBERON:0003075!4.55e-21!86;UBERON:0007284!4.55e-21!86;UBERON:0002791!4.81e-21!33;UBERON:0002346!6.47e-21!90;UBERON:0001869!1.45e-20!32;UBERON:0003056!1.23e-17!61;UBERON:0000956!1.08e-16!25;UBERON:0000203!1.08e-16!25;UBERON:0002619!4.16e-15!22;UBERON:0001950!6.58e-14!20;UBERON:0000062!4.15e-09!511;UBERON:0003076!1.66e-08!15;UBERON:0003057!1.66e-08!15;UBERON:0000922!2.08e-07!612;UBERON:0004732!2.31e-07!13;UBERON:0004733!5.62e-07!12;UBERON:0002028!5.62e-07!12;UBERON:0007277!5.62e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.15e-21;34!UBERON:0001869;4.93e-21;32!UBERON:0003528;5.90e-21;34!UBERON:0002020;5.90e-21;34!UBERON:0002791;6.76e-21;32!UBERON:0002780;2.57e-20;41!UBERON:0001890;2.57e-20;41!UBERON:0000073;4.33e-20;53!UBERON:0002616;4.33e-20;53!UBERON:0000956;8.50e-19;25!UBERON:0000203;8.50e-19;25!UBERON:0002619;5.33e-17;22!UBERON:0001950;1.23e-15;20!UBERON:0000955;6.32e-15;68!UBERON:0001017;1.80e-14;75!UBERON:0001016;6.65e-13;83!UBERON:0007023;6.82e-10;114!UBERON:0004732;1.14e-07;13!UBERON:0004733;3.03e-07;12!UBERON:0002028;3.03e-07;12!UBERON:0002420;4.54e-07;9!UBERON:0007245;4.54e-07;9!UBERON:0010009;4.54e-07;9!UBERON:0010011;4.54e-07;9!UBERON:0000454;4.54e-07;9!UBERON:0000125;5.99e-07;9!UBERON:0002308;5.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.03e-37,114;UBERON:0001017,3.19e-37,81;UBERON:0001049,7.48e-36,56;UBERON:0005068,7.48e-36,56;UBERON:0006241,7.48e-36,56;UBERON:0007135,7.48e-36,56;UBERON:0000073,5.54e-34,53;UBERON:0002616,5.54e-34,53;UBERON:0001016,1.65e-33,89;UBERON:0000955,2.56e-30,68;UBERON:0006238,2.56e-30,68;UBERON:0002780,5.24e-28,41;UBERON:0001890,5.24e-28,41;UBERON:0003080,5.24e-28,41;UBERON:0006240,5.24e-28,41;UBERON:0010371,9.25e-27,104;UBERON:0004121,2.19e-25,171;UBERON:0000924,2.19e-25,171;UBERON:0006601,2.19e-25,171;UBERON:0003075,2.74e-25,82;UBERON:0007284,2.74e-25,82;UBERON:0002346,1.78e-24,86;UBERON:0001893,2.28e-24,34;UBERON:0003528,3.77e-24,34;UBERON:0002020,3.77e-24,34;UBERON:0001869,4.79e-23,32;UBERON:0002791,6.92e-23,32;UBERON:0003056,9.59e-21,61;UBERON:0000956,1.15e-18,25;UBERON:0000203,1.15e-18,25;UBERON:0011216,6.97e-18,223;UBERON:0002619,7.15e-17,22;UBERON:0001950,1.62e-15,20;UBERON:0010314,3.52e-13,132;UBERON:0000922,4.55e-09,592;UBERON:0003076,6.03e-09,15;UBERON:0003057,6.03e-09,15;UBERON:0005423,4.39e-08,581;UBERON:0002050,8.81e-08,564;UBERON:0004732,1.15e-07,13;UBERON:0004733,3.16e-07,12;UBERON:0002028,3.16e-07,12;UBERON:0007277,3.16e-07,12;UBERON:0000923,3.45e-07,560;UBERON:0010316,3.45e-07,560;UBERON:0005291,3.45e-07,560;UBERON:0006598,3.45e-07,560;UBERON:0010317,3.45e-07,560;UBERON:0002532,3.45e-07,560;UBERON:0002420,4.72e-07,9;UBERON:0007245,4.72e-07,9;UBERON:0010009,4.72e-07,9;UBERON:0010011,4.72e-07,9;UBERON:0000454,4.72e-07,9;UBERON:0000125,6.23e-07,9;UBERON:0002308,6.23e-07,9 | |||
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| ||
|short_description=p1@SRGAP3 | |||
}} | }} |
Latest revision as of 19:38, 19 September 2015
Short description: | p1@SRGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRGAP3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001033117, NM_014850, uc003brf.1, uc003brg.1, uc003brk.2_5end |
EntrezGene: | SRGAP3 |
HGNC: | 19744 |
UniProt: | O43295 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data