FFCP PHASE1:Hg19::chr4:81118647..81118666,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:81118647..81118666,+ to FFCP PHASE1:Hg19::chr4:81118647..81118666,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56978 | |EntrezGene=56978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13993 | |HGNC=13993 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQV8,Q05CA1 | |UniProt=Q9NQV8,Q05CA1 | ||
|association_with_transcript=0bp_to_ENST00000415738,NM_001099403,uc003hmc.3_5end | |||
|cluster_id=chr4:81118647..81118666,+ | |||
|coexpression_cluster_id=C4432 | |||
|description=CAGE_peak_1_at_PRDM8_5end | |||
|id=chr4:81118647..81118666,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.31e-07;33!CL:0002057;6.31e-07;33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.86e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.58e-27!115;UBERON:0001049!2.81e-27!57;UBERON:0005068!2.81e-27!57;UBERON:0006241!2.81e-27!57;UBERON:0007135!2.81e-27!57;UBERON:0000073!1.78e-26!94;UBERON:0001016!1.78e-26!94;UBERON:0001017!2.76e-23!82;UBERON:0005743!1.04e-22!86;UBERON:0002616!1.25e-22!59;UBERON:0002780!3.90e-21!41;UBERON:0001890!3.90e-21!41;UBERON:0006240!3.90e-21!41;UBERON:0000955!4.53e-20!69;UBERON:0006238!4.53e-20!69;UBERON:0003080!4.58e-20!42;UBERON:0002346!4.09e-19!90;UBERON:0003075!4.18e-19!86;UBERON:0007284!4.18e-19!86;UBERON:0001893!8.56e-18!34;UBERON:0002020!1.12e-17!34;UBERON:0003528!1.12e-17!34;UBERON:0002791!3.59e-17!33;UBERON:0001869!1.38e-16!32;UBERON:0002619!2.19e-16!22;UBERON:0001950!5.55e-15!20;UBERON:0000956!2.66e-13!25;UBERON:0000203!2.66e-13!25;UBERON:0003056!4.12e-13!61;UBERON:0000924!5.83e-13!173;UBERON:0006601!5.83e-13!173;UBERON:0004121!9.96e-13!169;UBERON:0000033!2.34e-11!123;UBERON:0000153!5.93e-11!129;UBERON:0007811!5.93e-11!129;UBERON:0003076!2.32e-08!15;UBERON:0003057!2.32e-08!15;UBERON:0000479!1.27e-07!787;UBERON:0004732!3.83e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.66e-19;22!UBERON:0002780;1.64e-18;41!UBERON:0001890;1.64e-18;41!UBERON:0001893;4.56e-18;34!UBERON:0003528;7.09e-18;34!UBERON:0002020;7.09e-18;34!UBERON:0000073;8.27e-18;53!UBERON:0002616;8.27e-18;53!UBERON:0001950;8.28e-18;20!UBERON:0001869;8.46e-18;32!UBERON:0002791;1.07e-17;32!UBERON:0000956;6.63e-16;25!UBERON:0000203;6.63e-16;25!UBERON:0001016;3.44e-13;83!UBERON:0001017;1.22e-12;75!UBERON:0000955;1.89e-11;68!UBERON:0004732;1.71e-07;13!UBERON:0007023;3.31e-07;114!UBERON:0002420;5.61e-07;9!UBERON:0007245;5.61e-07;9!UBERON:0010009;5.61e-07;9!UBERON:0010011;5.61e-07;9!UBERON:0000454;5.61e-07;9!UBERON:0004733;9.35e-07;12!UBERON:0002028;9.35e-07;12!UBERON:0000125;9.93e-07;9!UBERON:0002308;9.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.78e-35,89;UBERON:0001049,3.43e-33,56;UBERON:0005068,3.43e-33,56;UBERON:0006241,3.43e-33,56;UBERON:0007135,3.43e-33,56;UBERON:0000073,8.02e-31,53;UBERON:0002616,8.02e-31,53;UBERON:0001017,4.17e-30,81;UBERON:0000955,1.38e-25,68;UBERON:0006238,1.38e-25,68;UBERON:0002780,2.47e-25,41;UBERON:0001890,2.47e-25,41;UBERON:0003080,2.47e-25,41;UBERON:0006240,2.47e-25,41;UBERON:0003075,7.86e-25,82;UBERON:0007284,7.86e-25,82;UBERON:0002346,3.46e-24,86;UBERON:0007023,2.66e-23,114;UBERON:0001893,2.71e-21,34;UBERON:0003528,3.77e-21,34;UBERON:0002020,3.77e-21,34;UBERON:0001869,7.83e-20,32;UBERON:0002791,8.01e-20,32;UBERON:0002619,1.86e-19,22;UBERON:0010371,1.84e-18,104;UBERON:0001950,9.24e-18,20;UBERON:0010314,1.27e-17,132;UBERON:0004121,1.73e-17,171;UBERON:0000924,1.73e-17,171;UBERON:0006601,1.73e-17,171;UBERON:0003056,5.15e-17,61;UBERON:0000956,7.29e-16,25;UBERON:0000203,7.29e-16,25;UBERON:0011216,1.27e-09,223;UBERON:0003076,6.13e-09,15;UBERON:0003057,6.13e-09,15;UBERON:0000923,6.38e-08,560;UBERON:0010316,6.38e-08,560;UBERON:0005291,6.38e-08,560;UBERON:0006598,6.38e-08,560;UBERON:0010317,6.38e-08,560;UBERON:0002532,6.38e-08,560;UBERON:0002050,8.03e-08,564;UBERON:0004732,1.71e-07,13;UBERON:0000479,2.37e-07,773;UBERON:0002420,5.34e-07,9;UBERON:0007245,5.34e-07,9;UBERON:0010009,5.34e-07,9;UBERON:0010011,5.34e-07,9;UBERON:0000454,5.34e-07,9;UBERON:0004733,9.27e-07,12;UBERON:0002028,9.27e-07,12;UBERON:0007277,9.27e-07,12;UBERON:0005423,9.32e-07,581;UBERON:0000125,9.59e-07,9;UBERON:0002308,9.59e-07,9 | |||
|phase1_expression=0.181678379270557,0.856402095563933,3.10099689011137,6.00439790118782,2.68176656656373,2.61701557230111,0,0,1.30592814099919,0,0,0,0,1.8564952944007,2.65117900582333,4.70627602516243,8.43772339233568,3.65155045193687,3.90346239032406,3.57051068422685,2.44800829493104,0.940364164434263,0,0,0.125542639594803,0,0,0,0,1.53531759238885,2.47705797305722,0,0.30120591877825,0,0,0,0.880801318004542,1.10799081706375,0.401088894940283,1.51907609501096,0,0,0.257575567634187,1.01778767145695,0,2.42584061187816,2.55671940596253,1.23350366406548,1.54853185447552,5.46615545412086,5.12321413058201,5.43909128743746,3.44745680736619,3.22742341791913,4.06279459783025,2.63539275359647,1.09162460023138,2.9214052977861,5.20342617030534,2.88836124368484,3.19668562899521,5.60747210317417,2.99195486432448,2.13112375266347,3.19230162491442,3.40431134814684,6.85104473895132,17.3361579027153,10.9511412868242,5.42972111762792,4.84319602106695,2.57794345191295,6.0127853613768,0.422510572623884,0.425208599930087,0,0.336985893439485,0,0.16072558669708,0,0,0,3.51992488922645,1.09227722252426,0.889509253863555,0,1.20118796110804,0,2.64417949113945,0,0.569212969109448,1.76171156811282,2.6759125968766,1.32171328579026,2.24203425192614,0.263384084775077,3.14735632182133,8.64623678048162,1.43921049299656,0.334372990781356,0.32592226663359,0,0,2.22820913770347,0.589211814949674,1.10766947291811,0.812411591295047,4.09892223122161,0.910415432919148,0.328875809207352,0.552700035571697,1.73881851441031,2.07601188426885,0.267540828089713,0,1.92625882585863,1.91610246800961,0.68725489096526,1.01207876807801,0,0,0,0.301150238155546,0.255973222308837,0,1.4206635122641,0,2.01606743224732,2.67440195783507,1.15859523106239,0,0,0,0.722878304769133,5.51471701699479,1.01392563272577,0.795285947051099,0.973269740605272,0.0945348171640679,0,0.087834785693126,10.1508783510727,0,0,0,1.74129737299267,0.398873881556595,0.238490624305342,1.14398982156026,1.11437250398869,0,2.58070378531837,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,5.27121669744253,15.511210565933,0,0,0.25326102332916,0.397227542439656,4.87622255272983,3.19201543978521,3.36406560085384,1.06748995729705,0.24666754841716,1.24484414159907,0,0,0,0.576175924479999,0.70296429550139,0.936480230490962,6.84566185853339,0.448346041655403,5.04968344168189,0.809364721840658,0.561803226808994,2.65400422631361,21.1275025776241,0.826606249406124,2.37600571456411,2.71993622206413,0,0.718618141816238,2.69337782326506,1.87677779807946,9.14311581097804,7.02364193409341,0,0.751190294532984,0,11.660326319776,5.12537733164562,0.635795703478686,6.00182192168805,4.43125875725287,9.53269998168828,6.51408997160564,3.20675031258406,1.26668106709558,3.28163906517349,1.65689817556139,0.323292113637624,11.005297368015,14.6090542430078,22.8906799619158,0.193260853163297,0,0.573609190778008,0,0,0.116193942869518,0,0,0,34.4188971125595,19.9404690839794,42.821825619269,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,2.07986957055916,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,6.40462209264727,0.704387472105808,39.8069981838282,18.4473540373711,14.3916374106073,0,0,0,1.71072446022705,1.13110241973656,0,0,0,0,0.07333828582095,2.71470603091333,0,0,0,0,0,0,1.3321108950805,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,14.377491329495,50.5392517670101,7.13184525203592,0,0.410952645100767,0.179060963239896,0,0.985153801009636,1.94064817373566,1.54011643535698,2.03275699377971,93.7006947774876,143.058430363874,101.514856792615,185.002237979417,21.7212036944683,5.9832291840805,21.9640222121099,1.71768088406796,3.00102312635806,2.44138521329762,0,0.178428988797162,0,0.117141414992713,2.10662269809403,0,4.1389228517002,3.32112799267718,1.10621501125022,80.1935761540405,3.72022199179207,0.343143423810856,0.413536052245775,0.215714200818617,0.320182673410333,0,4.99306318531491,0.604780586659361,0,0,0.280660094433074,1.40953064181271,1.02341449813341,1.12597744800525,0,0,0,0.246381468041427,2.07701771673448,0.116210378459959,0,0,0,0.918515585316854,0,1.31124414959424,0.451199612907412,0,0,0,0,0,0,2.15915916102139,0,0,0,0,0,0,0,0,0,5.9042636225947,0,0.824328093181778,0,0.082509499920588,0.574265537996172,0,0,2.41676795730305,0,0,0.275673144969061,0,0,0.170453254832202,1.33548053470106,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,3.08033580176089,4.25844824253617,1.73986598415015,0.74129687641568,2.71937284809783,0,7.59310619324942,0,2.81487570442467,0.855877976067841,20.6832111151859,3.92474320099615,1.2591072030832,0.54907405947211,0.706874414074119,4.65019707618627,1.58510321173008,0.421258456238981,0,5.60541026151954,0,56.6474632343141,1.27264888758341,5.65040583101214,6.06501877900737,2.65375590096488,0.438450885253763,0,0,17.6532027957552,7.435763954394,18.3102141645957,0.430234056612155,0.294747123039363,17.1202104711,8.15950447362375,0,0.32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| ||
|short_description=p1@PRDM8 | |||
}} | }} |
Latest revision as of 22:15, 18 September 2015
Short description: | p1@PRDM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRDM8_5end |
Coexpression cluster: | C4432_carcinosarcoma_neuroblastoma_temporal_duodenum_parietal_Neurons_occipital |
Association with transcript: | 0bp_to_ENST00000415738, NM_001099403, uc003hmc.3_5end |
EntrezGene: | PRDM8 |
HGNC: | 13993 |
UniProt: | Q9NQV8Q05CA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data