FFCP PHASE1:Hg19::chr5:114516029..114516046,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:114516029..114516046,- to FFCP PHASE1:Hg19::chr5:114516029..114516046,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55521 | |EntrezGene=55521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16280 | |HGNC=16280 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ86 | |UniProt=Q9NQ86 | ||
|association_with_transcript=-173bp_to_ENST00000282369_5end | |||
|cluster_id=chr5:114516029..114516046,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_TRIM36_5end | |||
|id=chr5:114516029..114516046,- | |||
|ontology_enrichment_celltype=CL:0002319!5.34e-13!25;CL:0000128!1.07e-11!7;CL:0000126!1.07e-11!7;CL:0000127!1.07e-11!7;CL:0002453!1.07e-11!7;CL:0000047!7.92e-11!8;CL:0000540!6.58e-08!6;CL:0000031!6.58e-08!6;CL:0000404!6.58e-08!6;CL:0000133!7.58e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.58e-13;6!CL:0000404;4.58e-13;6!CL:0000222;7.82e-10;1!CL:0002319;1.63e-07;25!CL:0000333;1.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.75e-17,8;CL:0000540,3.36e-13,6;CL:0000031,3.36e-13,6;CL:0000404,3.36e-13,6;CL:0002319,1.46e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;4.58e-13;6!UBERON:0005425;1.55e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.35e-61!94;UBERON:0001016!3.35e-61!94;UBERON:0005743!1.81e-59!86;UBERON:0001017!9.89e-59!82;UBERON:0001049!3.83e-55!57;UBERON:0005068!3.83e-55!57;UBERON:0006241!3.83e-55!57;UBERON:0007135!3.83e-55!57;UBERON:0000955!4.97e-49!69;UBERON:0006238!4.97e-49!69;UBERON:0002780!3.11e-48!41;UBERON:0001890!3.11e-48!41;UBERON:0006240!3.11e-48!41;UBERON:0002616!1.22e-47!59;UBERON:0002020!4.42e-47!34;UBERON:0003528!4.42e-47!34;UBERON:0003080!7.97e-47!42;UBERON:0001893!8.17e-47!34;UBERON:0002791!2.36e-45!33;UBERON:0001869!5.13e-44!32;UBERON:0002346!5.04e-43!90;UBERON:0003075!9.63e-42!86;UBERON:0007284!9.63e-42!86;UBERON:0003056!4.67e-40!61;UBERON:0000956!1.45e-33!25;UBERON:0000203!1.45e-33!25;UBERON:0000924!7.05e-33!173;UBERON:0006601!7.05e-33!173;UBERON:0004121!1.65e-31!169;UBERON:0000033!1.45e-29!123;UBERON:0002619!1.28e-28!22;UBERON:0001950!1.47e-28!20;UBERON:0000153!1.96e-27!129;UBERON:0007811!1.96e-27!129;UBERON:0007023!8.82e-25!115;UBERON:0002420!3.06e-15!9;UBERON:0007245!3.06e-15!9;UBERON:0010009!3.06e-15!9;UBERON:0010011!3.06e-15!9;UBERON:0000454!3.06e-15!9;UBERON:0002308!8.27e-15!9;UBERON:0000125!8.27e-15!9;UBERON:0000025!6.34e-13!194;UBERON:0009663!9.80e-12!7;UBERON:0001871!2.55e-11!7;UBERON:0000200!1.08e-10!6;UBERON:0003076!7.39e-10!15;UBERON:0003057!7.39e-10!15;UBERON:0004732!1.44e-09!13;UBERON:0002021!1.79e-09!5;UBERON:0000064!4.54e-09!219;UBERON:0004111!1.07e-08!241;UBERON:0004733!3.99e-08!12;UBERON:0002028!3.99e-08!12;UBERON:0007277!3.99e-08!12;UBERON:0000483!9.23e-08!309;UBERON:0000369!1.19e-07!4;UBERON:0002435!1.19e-07!4;UBERON:0000204!1.19e-07!4;UBERON:0010082!1.19e-07!4;UBERON:0002298!1.43e-07!8;UBERON:0000119!1.54e-07!312;UBERON:0000475!3.66e-07!365;UBERON:0000477!6.88e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.25e-19;25!UBERON:0000203;1.25e-19;25!UBERON:0001950;6.23e-19;20!UBERON:0001876;1.23e-17;2!UBERON:0003714;2.41e-17;2!UBERON:0002619;3.19e-17;22!UBERON:0002791;2.35e-15;32!UBERON:0001869;2.69e-15;32!UBERON:0001893;4.64e-13;34!UBERON:0003528;4.90e-13;34!UBERON:0002020;4.90e-13;34!UBERON:0002780;1.04e-12;41!UBERON:0001890;1.04e-12;41!UBERON:0001871;1.97e-11;6!UBERON:0000941;1.55e-09;1!UBERON:0001785;1.55e-09;1!UBERON:0002464;1.55e-09;1!UBERON:0004904;1.55e-09;1!UBERON:0001021;1.55e-09;1!UBERON:0001016;3.02e-09;83!UBERON:0000010;9.36e-09;8!UBERON:0000073;1.89e-08;53!UBERON:0002616;1.89e-08;53!UBERON:0000955;5.57e-08;68!UBERON:0002021;1.03e-07;5!UBERON:0001872;1.10e-07;5!UBERON:0000349;1.36e-07;5!UBERON:0001017;1.56e-07;75!UBERON:0000013;1.77e-07;5!UBERON:0002410;1.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.56e-26,89;UBERON:0001017,5.58e-20,81;UBERON:0000956,1.49e-19,25;UBERON:0000203,1.49e-19,25;UBERON:0001950,7.87e-19,20;UBERON:0001876,1.46e-17,2;UBERON:0003714,1.59e-17,2;UBERON:0002619,3.94e-17,22;UBERON:0002791,3.43e-15,32;UBERON:0001869,3.43e-15,32;UBERON:0002780,9.41e-15,41;UBERON:0001890,9.41e-15,41;UBERON:0003080,9.41e-15,41;UBERON:0006240,9.41e-15,41;UBERON:0003528,2.89e-14,34;UBERON:0002020,2.89e-14,34;UBERON:0001893,2.89e-14,34;UBERON:0000955,1.20e-12,68;UBERON:0006238,1.20e-12,68;UBERON:0004121,2.24e-12,171;UBERON:0000924,2.24e-12,171;UBERON:0006601,2.24e-12,171;UBERON:0003056,7.69e-12,61;UBERON:0001871,2.08e-11,6;UBERON:0000073,3.47e-11,53;UBERON:0002616,3.47e-11,53;UBERON:0001049,1.58e-10,56;UBERON:0005068,1.58e-10,56;UBERON:0006241,1.58e-10,56;UBERON:0007135,1.58e-10,56;UBERON:0011216,5.27e-10,223;UBERON:0000941,1.48e-09,1;UBERON:0001785,1.48e-09,1;UBERON:0002464,1.48e-09,1;UBERON:0004904,1.48e-09,1;UBERON:0001021,1.48e-09,1;UBERON:0003902,1.48e-09,1;UBERON:0005425,1.48e-09,1;UBERON:0000010,9.49e-09,8;UBERON:0003075,1.88e-08,82;UBERON:0007284,1.88e-08,82;UBERON:0002346,5.43e-08,86;UBERON:0002021,1.04e-07,5;UBERON:0001872,1.36e-07,5;UBERON:0000349,1.46e-07,5;UBERON:0000013,1.83e-07,5;UBERON:0002410,1.83e-07,5 | |||
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| ||
|short_description=p4@TRIM36 | |||
}} | }} |
Latest revision as of 19:30, 19 September 2015
Short description: | p4@TRIM36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM36_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -173bp_to_ENST00000282369_5end |
EntrezGene: | TRIM36 |
HGNC: | 16280 |
UniProt: | Q9NQ86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.75e-17 | 8 |
neuron | 3.36e-13 | 6 |
neuroblast | 3.36e-13 | 6 |
electrically signaling cell | 3.36e-13 | 6 |
neural cell | 1.46e-07 | 25 |