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FFCP PHASE1:Mm9::chr9:64233453..64233464,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:64233453..64233464,+
|DHSsupport=NA
|short_description=p2@Megf11
|DPIdataset=NA
|description=CAGE_peak_2_at_Megf11_5end
|association_with_transcript=20bp_to_ENSMUST00000093829,ENSMUST00000118485,ENSMUST00000164113,NM_001134399,NM_172522,uc009qby.2,uc009qbz.2,uc009qca.2,uc012gvd.1,uc012gve.1_5end
|EntrezGene=214058
|EntrezGene=214058
|HGNC=
|HGNC=
|MCL_coexpression_id=401
|TSSclassifier=NA
|UniProt=Q80T91,E9Q918
|UniProt=Q80T91,E9Q918
|association_with_transcript=20bp_to_ENSMUST00000093829,ENSMUST00000118485,ENSMUST00000164113,NM_001134399,NM_172522,uc009qby.2,uc009qbz.2,uc009qca.2,uc012gvd.1,uc012gve.1_5end
|cluster_id=chr9:64233453..64233464,+
|description=CAGE_peak_2_at_Megf11_5end
|id=chr9:64233453..64233464,+
|ontology_enrichment_celltype=CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000117!1.55e-14!23;CL:0000337!1.55e-14!23;CL:0002319!6.94e-11!43;CL:0000221!2.84e-10!44;CL:0000133!2.84e-10!44;CL:0000393!6.20e-10!39;CL:0000211!6.20e-10!39;CL:0000055!2.96e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.13e-22,23;CL:0000337,3.13e-22,23;CL:0000540,1.72e-15,33;CL:0000047,1.72e-15,33;CL:0000031,1.72e-15,33;CL:0000404,1.72e-15,33;CL:0000393,2.68e-12,39;CL:0000211,2.68e-12,39;CL:0002319,6.65e-12,43;CL:0000221,1.64e-11,44;CL:0000133,1.64e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.67e-29!73;UBERON:0005743!1.67e-29!73;UBERON:0000073!2.69e-28!75;UBERON:0001016!2.69e-28!75;UBERON:0002346!3.01e-26!71;UBERON:0003075!3.01e-26!71;UBERON:0007284!3.01e-26!71;UBERON:0004121!1.10e-25!102;UBERON:0000924!1.10e-25!102;UBERON:0006601!1.10e-25!102;UBERON:0001049!2.81e-24!52;UBERON:0005068!2.81e-24!52;UBERON:0006241!2.81e-24!52;UBERON:0007135!2.81e-24!52;UBERON:0002616!8.68e-22!49;UBERON:0000955!8.84e-22!50;UBERON:0006238!8.84e-22!50;UBERON:0000033!9.67e-21!63;UBERON:0003056!2.10e-19!49;UBERON:0003080!6.96e-18!40;UBERON:0002780!3.93e-17!39;UBERON:0001890!3.93e-17!39;UBERON:0006240!3.93e-17!39;UBERON:0002020!6.84e-16!34;UBERON:0002791!2.90e-12!29;UBERON:0003528!2.90e-12!29;UBERON:0001893!2.90e-12!29;UBERON:0007811!2.99e-12!86;UBERON:0000153!5.02e-10!94;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0003076!5.32e-07!12;UBERON:0003057!5.32e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-39,54;UBERON:0001017,6.79e-38,73;UBERON:0001016,1.38e-36,75;UBERON:0001049,4.11e-36,52;UBERON:0005068,4.11e-36,52;UBERON:0006241,4.11e-36,52;UBERON:0007135,4.11e-36,52;UBERON:0002346,8.57e-33,64;UBERON:0003075,8.57e-33,64;UBERON:0007284,8.57e-33,64;UBERON:0004121,1.66e-29,95;UBERON:0000924,1.66e-29,95;UBERON:0006601,1.66e-29,95;UBERON:0010371,1.75e-27,73;UBERON:0002616,1.65e-26,46;UBERON:0000955,9.05e-26,47;UBERON:0006238,9.05e-26,47;UBERON:0003080,3.07e-22,40;UBERON:0002020,7.29e-22,34;UBERON:0010314,4.79e-21,92;UBERON:0002780,9.31e-21,39;UBERON:0001890,9.31e-21,39;UBERON:0006240,9.31e-21,39;UBERON:0003056,6.50e-20,49;UBERON:0003076,8.38e-15,12;UBERON:0003057,8.38e-15,12;UBERON:0003528,1.51e-14,29;UBERON:0002791,1.51e-14,29;UBERON:0001893,1.51e-14,29;UBERON:0002420,1.39e-12,8;UBERON:0007245,1.39e-12,8;UBERON:0010009,1.39e-12,8;UBERON:0010011,1.39e-12,8;UBERON:0000454,1.39e-12,8;UBERON:0002240,7.72e-12,6;UBERON:0005174,7.72e-12,6;UBERON:0001137,7.72e-12,6;UBERON:0000025,2.84e-11,114;UBERON:0001948,2.92e-10,5;UBERON:0002315,2.92e-10,5;UBERON:0004111,6.22e-10,122;UBERON:0002950,4.69e-08,4;UBERON:0001891,4.69e-08,4;UBERON:0009616,4.69e-08,4;UBERON:0010286,4.69e-08,4;UBERON:0000369,7.08e-08,5;UBERON:0002435,7.08e-08,5;UBERON:0000204,7.08e-08,5;UBERON:0010082,7.08e-08,5;UBERON:0011216,2.17e-07,194;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0001894,3.17e-07,10;UBERON:0006222,3.17e-07,10
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,5.86717736492834,4.23192783417626,3.1691570175309,0.338844532069132,0,0,0,0,1.49800055259202,0.384218305321555,0.829516898467821,0.810035629990144,0.420649922702764,9.42648248532552,5.30084498283872,0.857435594504678,0.575072826109418,1.83843757322004,6.60695285996332,3.19218345212969,3.84016333140609,3.56092976871523,2.10421580285542,2.6045668527838,4.18774498502071,5.06486349028512,3.51435969886663,7.66034322231536,5.12538050876771,4.84638559145781,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0.693941307064543,3.04465478312141,0.461230994512117,0,0.705532242814229,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,0,15.2246014446005,20.7352239745321,0,0,0,0,5.54225365797844,3.20250421973039,1.00523481690292,4.17178368461463,3.06858548796397,3.74018480207208,4.05603157669394,0,0,0,0.420883711772948,0,0.229902104433473,0.360124259610698,0.90422890701429,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,3.15434922846191,0.823236899034275,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.913988100877831,0,0.610953983535943,0.387904974335251,0.771494018793504,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0.664394068946325,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,3.69266356971921,2.69586879162067,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0.728341908464944,0.906970670894253,0.377210159511796,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0.776152102696527,1.71469628025274,1.95074257006501,1.60531935841864,0.822745103010605,2.13125464380219,0,2.96564899209348,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.328281799490123,0,4.07935664423121,0,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0.448549638131936,0,0.194451188344048,0.387479470433193,0.506868376472335,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,0.73260649706906,0,0,0.564751842617067,1.38097570952153,2.29158205375759,3.78077001156113,3.42541259885321,5.2877572817279,1.35004500046361,0.45032120322422,0.906284817968409,3.10656187051092,0.207574695168353,0.399024873401031,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.44449345560323,1.03017528619447,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.768301828858431,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.872078499793971,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,5.86717736492834,4.23192783417626,3.1691570175309,0.338844532069132,0,0,0,0,1.49800055259202,0.384218305321555,0.829516898467821,0.810035629990144,0.420649922702764,9.42648248532552,5.30084498283872,0.857435594504678,0.575072826109418,1.83843757322004,6.60695285996332,3.19218345212969,3.84016333140609,3.56092976871523,2.10421580285542,2.6045668527838,4.18774498502071,5.06486349028512,3.51435969886663,7.66034322231536,5.12538050876771,4.84638559145781,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0.693941307064543,3.04465478312141,0.461230994512117,0,0.705532242814229,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,0,15.2246014446005,20.7352239745321,0,0,0,0,5.54225365797844,3.20250421973039,1.00523481690292,4.17178368461463,3.06858548796397,3.74018480207208,4.05603157669394,0,0,0,0.420883711772948,0,0.229902104433473,0.360124259610698,0.90422890701429,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,3.15434922846191,0.823236899034275,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.913988100877831,0,0.610953983535943,0.387904974335251,0.771494018793504,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0.664394068946325,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,3.69266356971921,2.69586879162067,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0.728341908464944,0.906970670894253,0.377210159511796,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0.776152102696527,1.71469628025274,1.95074257006501,1.60531935841864,0.822745103010605,2.13125464380219,0,2.96564899209348,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.328281799490123,0,4.07935664423121,0,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0.448549638131936,0,0.194451188344048,0.387479470433193,0.506868376472335,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,0.73260649706906,0,0,0.564751842617067,1.38097570952153,2.29158205375759,3.78077001156113,3.42541259885321,5.2877572817279,1.35004500046361,0.45032120322422,0.906284817968409,3.10656187051092,0.207574695168353,0.399024873401031,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.44449345560323,1.03017528619447,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.768301828858431,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.872078499793971,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421
|short_description=p2@Megf11
}}
}}

Latest revision as of 00:00, 27 September 2015

Short description:p2@Megf11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Megf11_5end
Coexpression cluster:MCL_coexpression_mm9:401
Association with transcript: 20bp_to_ENSMUST00000093829, ENSMUST00000118485, ENSMUST00000164113, NM_001134399, NM_172522, uc009qby.2, uc009qbz.2, uc009qca.2, uc012gvd.1, uc012gve.1_5end
EntrezGene:Megf11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Megf11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I220.74
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.13e-2223
neuroblast (sensu Vertebrata)3.13e-2223
neuron1.72e-1533
neuronal stem cell1.72e-1533
neuroblast1.72e-1533
electrically signaling cell1.72e-1533
electrically responsive cell2.68e-1239
electrically active cell2.68e-1239
neural cell6.65e-1243
ectodermal cell1.64e-1144
neurectodermal cell1.64e-1144

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.72e-3954
central nervous system6.79e-3873
nervous system1.38e-3675
neural tube4.11e-3652
neural rod4.11e-3652
future spinal cord4.11e-3652
neural keel4.11e-3652
neurectoderm8.57e-3364
neural plate8.57e-3364
presumptive neural plate8.57e-3364
ectoderm-derived structure1.66e-2995
ectoderm1.66e-2995
presumptive ectoderm1.66e-2995
ecto-epithelium1.75e-2773
regional part of brain1.65e-2646
brain9.05e-2647
future brain9.05e-2647
anterior neural tube3.07e-2240
gray matter7.29e-2234
structure with developmental contribution from neural crest4.79e-2192
regional part of forebrain9.31e-2139
forebrain9.31e-2139
future forebrain9.31e-2139
pre-chordal neural plate6.50e-2049
posterior neural tube8.38e-1512
chordal neural plate8.38e-1512
brain grey matter1.51e-1429
regional part of telencephalon1.51e-1429
telencephalon1.51e-1429
basal ganglion1.39e-128
nuclear complex of neuraxis1.39e-128
aggregate regional part of brain1.39e-128
collection of basal ganglia1.39e-128
cerebral subcortex1.39e-128
spinal cord7.72e-126
dorsal region element7.72e-126
dorsum7.72e-126
tube2.84e-11114
regional part of spinal cord2.92e-105
gray matter of spinal cord2.92e-105
anatomical conduit6.22e-10122
regional part of midbrain4.69e-084
midbrain4.69e-084
presumptive midbrain4.69e-084
midbrain neural tube4.69e-084
corpus striatum7.08e-085
striatum7.08e-085
ventral part of telencephalon7.08e-085
future corpus striatum7.08e-085
organ system subdivision2.17e-07194
occipital lobe2.48e-0710
visual cortex2.48e-0710
neocortex2.48e-0710
diencephalon3.17e-0710
future diencephalon3.17e-0710
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