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FFCP PHASE1:Mm9::chr13:58909624..58909647,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007quk.1_5end
|association_with_transcript=0bp_to_uc007quk.1_5end
|cluster_id=chr13:58909624..58909647,+
|description=CAGE_peak_6_at_Ntrk2_5end
|description=CAGE_peak_6_at_Ntrk2_5end
|id=chr13:58909624..58909647,+
|id=chr13:58909624..58909647,+
|ontology_enrichment_celltype=CL:0000117!7.76e-13!23;CL:0000337!7.76e-13!23;CL:0002319!4.46e-11!43;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0000055!1.32e-07!50;CL:0002453!9.10e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-14,23;CL:0000337,2.69e-14,23;CL:0002319,3.47e-14,43;CL:0000221,1.06e-13,44;CL:0000133,1.06e-13,44;CL:0002453,1.09e-09,8;CL:0000540,1.48e-08,33;CL:0000047,1.48e-08,33;CL:0000031,1.48e-08,33;CL:0000404,1.48e-08,33;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0000128,7.30e-07,6;CL:0000126,7.30e-07,6;CL:0000127,7.30e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.12e-30!52;UBERON:0005068!2.12e-30!52;UBERON:0006241!2.12e-30!52;UBERON:0007135!2.12e-30!52;UBERON:0000073!3.00e-30!75;UBERON:0001016!3.00e-30!75;UBERON:0001017!3.88e-30!73;UBERON:0005743!3.88e-30!73;UBERON:0000955!7.47e-30!50;UBERON:0006238!7.47e-30!50;UBERON:0002616!6.07e-29!49;UBERON:0004121!3.51e-28!102;UBERON:0000924!3.51e-28!102;UBERON:0006601!3.51e-28!102;UBERON:0000033!6.85e-28!63;UBERON:0002346!2.73e-25!71;UBERON:0003075!2.73e-25!71;UBERON:0007284!2.73e-25!71;UBERON:0003080!2.04e-22!40;UBERON:0003056!9.43e-22!49;UBERON:0002780!1.31e-21!39;UBERON:0001890!1.31e-21!39;UBERON:0006240!1.31e-21!39;UBERON:0002020!2.03e-20!34;UBERON:0002791!2.53e-17!29;UBERON:0003528!2.53e-17!29;UBERON:0001893!2.53e-17!29;UBERON:0007811!7.05e-17!86;UBERON:0000153!1.09e-15!94;UBERON:0000956!9.00e-13!21;UBERON:0001869!9.00e-13!21;UBERON:0000203!9.00e-13!21;UBERON:0002619!1.36e-11!17;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0000025!2.65e-08!114;UBERON:0004111!6.62e-08!122;UBERON:0002021!9.05e-08!10;UBERON:0000411!9.05e-08!10;UBERON:0001950!9.05e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.60e-45,73;UBERON:0000073,8.64e-44,54;UBERON:0001016,2.87e-43,75;UBERON:0001049,2.58e-40,52;UBERON:0005068,2.58e-40,52;UBERON:0006241,2.58e-40,52;UBERON:0007135,2.58e-40,52;UBERON:0004121,2.10e-35,95;UBERON:0000924,2.10e-35,95;UBERON:0006601,2.10e-35,95;UBERON:0000955,1.54e-34,47;UBERON:0006238,1.54e-34,47;UBERON:0002346,1.26e-33,64;UBERON:0003075,1.26e-33,64;UBERON:0007284,1.26e-33,64;UBERON:0002616,5.44e-33,46;UBERON:0002020,1.98e-29,34;UBERON:0010371,6.24e-28,73;UBERON:0003080,1.41e-27,40;UBERON:0002780,3.56e-26,39;UBERON:0001890,3.56e-26,39;UBERON:0006240,3.56e-26,39;UBERON:0003056,1.01e-23,49;UBERON:0003528,1.17e-23,29;UBERON:0002791,1.17e-23,29;UBERON:0001893,1.17e-23,29;UBERON:0010314,9.90e-21,92;UBERON:0002619,7.41e-19,17;UBERON:0000956,1.37e-16,21;UBERON:0001869,1.37e-16,21;UBERON:0000203,1.37e-16,21;UBERON:0000025,3.07e-15,114;UBERON:0004111,2.85e-14,122;UBERON:0002021,1.44e-13,10;UBERON:0000411,1.44e-13,10;UBERON:0001950,1.44e-13,10;UBERON:0003076,8.81e-13,12;UBERON:0003057,8.81e-13,12;UBERON:0011216,5.13e-12,194;UBERON:0002420,3.44e-08,8;UBERON:0007245,3.44e-08,8;UBERON:0010009,3.44e-08,8;UBERON:0010011,3.44e-08,8;UBERON:0000454,3.44e-08,8;UBERON:0002240,4.19e-08,6;UBERON:0005174,4.19e-08,6;UBERON:0001137,4.19e-08,6;UBERON:0002950,1.83e-07,4;UBERON:0001891,1.83e-07,4;UBERON:0009616,1.83e-07,4;UBERON:0010286,1.83e-07,4;UBERON:0001948,5.73e-07,5;UBERON:0002315,5.73e-07,5;UBERON:0000483,6.75e-07,174;UBERON:0001954,6.96e-07,7;UBERON:0003022,6.96e-07,7;UBERON:0002421,6.96e-07,7;UBERON:0000349,6.96e-07,7;UBERON:0002600,6.96e-07,7
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,16.5699118849139,10.5449367712546,15.1655321277941,9.09911740564856,5.75010257459886,0,0,0,0,0,0,0.606949382578793,2.11596391708813,1.90149421051854,0,0,0,0.988866362566974,0,9.28760342607055,34.9638657842615,0.829516898467821,0.270011876663381,0.841299845405528,3.71346279724945,7.50953039235486,1.71487118900936,2.01275489138296,0.919218786610021,19.82085857989,16.2162919368188,13.5173749265494,1.18697658957174,1.09785172322892,0.52091337055676,15.9134309430787,11.8180148106653,21.8501494320838,4.41942878210502,4.8406371471695,2.79599168737951,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0.247194967734374,1.87979163995885,0,0,0,0,0,4.68449275218475,3.35114730901528,0,0,0,0,12.8819949888148,6.8625090422794,2.1361239859187,9.03886464999838,7.67146371990992,12.6750707181332,10.3834408363365,0.509196819251581,0.373220911830279,0,1.05220927943237,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.640568601424249,0.655912071918102,1.29351685369508,0.215567992932842,0,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,5.04695876553905,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0,0,0,0,0.390267295715598,0.472905432318573,0.44292937929755,1.2756381492599,0.81931657357869,1.03610989119537,1.3018415272336,0,0,0,0.827810238914197,7.06422595946285,8.90808818100744,0,0,0,0,0,0,0,0,0,0,0,20.2432429345738,0.567760340833074,0.534196811001766,1.95464351224291,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,1.06949213515416,0,0,0,1.70219802876894,0.18006109403131,0.905510786479282,0.857348140126369,0.709360934569094,1.78368817602071,1.31639216481697,1.2178597964584,0.23467170806371,0.42366414172764,0,0.49465875882444,0.322928853391811,0.180938774784468,0,0.164140899745061,0,5.93360966433631,0,2.27025554759545,1.66675074632741,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.258319646955462,0.168956125490778,0.821500670520278,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0,3.95326289831947,7.36520378411483,9.73922372846974,5.499301834998,7.53590771747707,6.0431511791176,8.77529250301348,6.75481804836331,6.34399372577886,7.24864436452548,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.888986911206461,0.824140228955577,0,1.01078884705519,0,0.377252682772152,0.37456602987953,0.256100609619477,0.402048282689293,0,0.347652977834566,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.355905054372522,0.591026894253381,0.818462086339379,0.309873682371932,0.771626443924566,0.749431733813838,0.701794825336225,0.429742108096597,1.3390183244819,0.220591419119515,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,16.5699118849139,10.5449367712546,15.1655321277941,9.09911740564856,5.75010257459886,0,0,0,0,0,0,0.606949382578793,2.11596391708813,1.90149421051854,0,0,0,0.988866362566974,0,9.28760342607055,34.9638657842615,0.829516898467821,0.270011876663381,0.841299845405528,3.71346279724945,7.50953039235486,1.71487118900936,2.01275489138296,0.919218786610021,19.82085857989,16.2162919368188,13.5173749265494,1.18697658957174,1.09785172322892,0.52091337055676,15.9134309430787,11.8180148106653,21.8501494320838,4.41942878210502,4.8406371471695,2.79599168737951,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0.247194967734374,1.87979163995885,0,0,0,0,0,4.68449275218475,3.35114730901528,0,0,0,0,12.8819949888148,6.8625090422794,2.1361239859187,9.03886464999838,7.67146371990992,12.6750707181332,10.3834408363365,0.509196819251581,0.373220911830279,0,1.05220927943237,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.640568601424249,0.655912071918102,1.29351685369508,0.215567992932842,0,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,5.04695876553905,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0,0,0,0,0.390267295715598,0.472905432318573,0.44292937929755,1.2756381492599,0.81931657357869,1.03610989119537,1.3018415272336,0,0,0,0.827810238914197,7.06422595946285,8.90808818100744,0,0,0,0,0,0,0,0,0,0,0,20.2432429345738,0.567760340833074,0.534196811001766,1.95464351224291,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,1.06949213515416,0,0,0,1.70219802876894,0.18006109403131,0.905510786479282,0.857348140126369,0.709360934569094,1.78368817602071,1.31639216481697,1.2178597964584,0.23467170806371,0.42366414172764,0,0.49465875882444,0.322928853391811,0.180938774784468,0,0.164140899745061,0,5.93360966433631,0,2.27025554759545,1.66675074632741,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.258319646955462,0.168956125490778,0.821500670520278,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0,3.95326289831947,7.36520378411483,9.73922372846974,5.499301834998,7.53590771747707,6.0431511791176,8.77529250301348,6.75481804836331,6.34399372577886,7.24864436452548,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.888986911206461,0.824140228955577,0,1.01078884705519,0,0.377252682772152,0.37456602987953,0.256100609619477,0.402048282689293,0,0.347652977834566,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.355905054372522,0.591026894253381,0.818462086339379,0.309873682371932,0.771626443924566,0.749431733813838,0.701794825336225,0.429742108096597,1.3390183244819,0.220591419119515,0.927471342481686
|short_description=p6@Ntrk2
|short_description=p6@Ntrk2
}}
}}

Latest revision as of 20:03, 1 October 2015

Short description:p6@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: 0bp_to_uc007quk.1_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.57
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E834.96
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I920.24
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.60e-4573
regional part of nervous system8.64e-4454
nervous system2.87e-4375
neural tube2.58e-4052
neural rod2.58e-4052
future spinal cord2.58e-4052
neural keel2.58e-4052
ectoderm-derived structure2.10e-3595
ectoderm2.10e-3595
presumptive ectoderm2.10e-3595
brain1.54e-3447
future brain1.54e-3447
neurectoderm1.26e-3364
neural plate1.26e-3364
presumptive neural plate1.26e-3364
regional part of brain5.44e-3346
gray matter1.98e-2934
ecto-epithelium6.24e-2873
anterior neural tube1.41e-2740
regional part of forebrain3.56e-2639
forebrain3.56e-2639
future forebrain3.56e-2639
pre-chordal neural plate1.01e-2349
brain grey matter1.17e-2329
regional part of telencephalon1.17e-2329
telencephalon1.17e-2329
structure with developmental contribution from neural crest9.90e-2192
regional part of cerebral cortex7.41e-1917
cerebral cortex1.37e-1621
cerebral hemisphere1.37e-1621
pallium1.37e-1621
tube3.07e-15114
anatomical conduit2.85e-14122
occipital lobe1.44e-1310
visual cortex1.44e-1310
neocortex1.44e-1310
posterior neural tube8.81e-1312
chordal neural plate8.81e-1312
organ system subdivision5.13e-12194
basal ganglion3.44e-088
nuclear complex of neuraxis3.44e-088
aggregate regional part of brain3.44e-088
collection of basal ganglia3.44e-088
cerebral subcortex3.44e-088
spinal cord4.19e-086
dorsal region element4.19e-086
dorsum4.19e-086
regional part of midbrain1.83e-074
midbrain1.83e-074
presumptive midbrain1.83e-074
midbrain neural tube1.83e-074
regional part of spinal cord5.73e-075
gray matter of spinal cord5.73e-075
epithelium6.75e-07174
Ammon's horn6.96e-077
lobe parts of cerebral cortex6.96e-077
hippocampal formation6.96e-077
limbic system6.96e-077
limbic lobe6.96e-077
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