FFCP PHASE1:Hg19::chr12:113587513..113587556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387885 | |EntrezGene=387885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37100 | |HGNC=37100 | ||
|TSSclassifier=strong | |||
|UniProt=A6NFT4 | |UniProt=A6NFT4 | ||
|association_with_transcript=-106bp_to_ENST00000335621,NM_001144872,uc010sys.1_5end | |association_with_transcript=-106bp_to_ENST00000335621,NM_001144872,uc010sys.1_5end | ||
|cluster_id=chr12:113587513..113587556,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_CCDC42B_5end | |description=CAGE_peak_1_at_CCDC42B_5end | ||
|id=chr12:113587513..113587556,+ | |id=chr12:113587513..113587556,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.51e-09;2!UBERON:0008947;6.45e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;9.53e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.04e-44!57;UBERON:0005068!3.04e-44!57;UBERON:0006241!3.04e-44!57;UBERON:0007135!3.04e-44!57;UBERON:0007023!2.37e-41!115;UBERON:0000955!5.00e-39!69;UBERON:0006238!5.00e-39!69;UBERON:0001017!5.57e-39!82;UBERON:0002780!1.52e-38!41;UBERON:0001890!1.52e-38!41;UBERON:0006240!1.52e-38!41;UBERON:0005743!6.13e-38!86;UBERON:0002616!8.15e-38!59;UBERON:0003080!2.26e-37!42;UBERON:0000073!3.14e-34!94;UBERON:0001016!3.14e-34!94;UBERON:0002020!1.02e-31!34;UBERON:0003528!1.02e-31!34;UBERON:0001893!2.47e-31!34;UBERON:0003075!3.92e-30!86;UBERON:0007284!3.92e-30!86;UBERON:0002791!3.98e-30!33;UBERON:0001869!1.00e-28!32;UBERON:0002346!3.88e-28!90;UBERON:0003056!3.00e-25!61;UBERON:0000153!2.57e-24!129;UBERON:0007811!2.57e-24!129;UBERON:0000033!1.12e-21!123;UBERON:0000956!1.68e-21!25;UBERON:0000203!1.68e-21!25;UBERON:0002619!1.52e-20!22;UBERON:0001950!1.12e-17!20;UBERON:0004121!6.24e-16!169;UBERON:0000924!3.36e-15!173;UBERON:0006601!3.36e-15!173;UBERON:0000025!1.90e-12!194;UBERON:0002308!7.73e-12!9;UBERON:0000125!7.73e-12!9;UBERON:0002420!1.99e-11!9;UBERON:0007245!1.99e-11!9;UBERON:0010009!1.99e-11!9;UBERON:0010011!1.99e-11!9;UBERON:0000454!1.99e-11!9;UBERON:0002298!1.41e-10!8;UBERON:0000349!2.90e-09!5;UBERON:0001871!2.90e-09!7;UBERON:0004111!4.37e-09!241;UBERON:0000200!5.35e-09!6;UBERON:0000062!5.67e-09!511;UBERON:0009663!1.34e-08!7;UBERON:0001894!1.46e-08!7;UBERON:0006222!1.46e-08!7;UBERON:0003076!2.30e-08!15;UBERON:0003057!2.30e-08!15;UBERON:0000369!3.60e-08!4;UBERON:0002435!3.60e-08!4;UBERON:0000204!3.60e-08!4;UBERON:0010082!3.60e-08!4;UBERON:0000475!4.11e-08!365;UBERON:0000477!2.55e-07!286;UBERON:0000483!3.68e-07!309;UBERON:0000119!6.09e-07!312;UBERON:0000064!8.06e-07!219;UBERON:0004733!8.64e-07!12;UBERON:0002028!8.64e-07!12;UBERON:0007277!8.64e-07!12;UBERON:0001896!9.15e-07!3;UBERON:0005290!9.15e-07!3;UBERON:0010096!9.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.83e-19;53!UBERON:0002616;1.83e-19;53!UBERON:0000349;6.82e-18;5!UBERON:0002298;1.45e-16;6!UBERON:0000369;1.37e-15;4!UBERON:0002435;1.37e-15;4!UBERON:0000204;1.37e-15;4!UBERON:0002780;1.44e-15;41!UBERON:0001890;1.44e-15;41!UBERON:0000125;5.67e-15;9!UBERON:0002308;5.67e-15;9!UBERON:0002420;3.46e-14;9!UBERON:0007245;3.46e-14;9!UBERON:0010009;3.46e-14;9!UBERON:0010011;3.46e-14;9!UBERON:0000454;3.46e-14;9!UBERON:0003528;1.05e-13;34!UBERON:0002020;1.05e-13;34!UBERON:0001896;1.01e-12;3!UBERON:0005290;1.01e-12;3!UBERON:0000955;1.08e-12;68!UBERON:0001017;2.85e-12;75!UBERON:0005383;4.40e-12;3!UBERON:0005382;4.40e-12;3!UBERON:0001893;1.93e-11;34!UBERON:0002791;3.96e-11;32!UBERON:0004733;4.13e-11;12!UBERON:0002028;4.13e-11;12!UBERON:0001869;1.00e-10;32!UBERON:0004732;3.37e-10;13!UBERON:0001016;1.31e-09;83!UBERON:0001873;4.51e-09;2!UBERON:0002148;5.90e-09;2!UBERON:0006331;5.90e-09;2!UBERON:0009662;5.90e-09;2!UBERON:0009663;6.39e-09;7!UBERON:0003127;6.50e-09;2!UBERON:0000341;1.55e-08;2!UBERON:0001894;1.61e-08;7!UBERON:0001897;1.61e-08;2!UBERON:0010225;1.61e-08;2!UBERON:0001954;2.42e-08;2!UBERON:0003022;2.42e-08;2!UBERON:0002421;2.42e-08;2!UBERON:0002600;2.42e-08;2!UBERON:0001876;9.53e-08;2!UBERON:0007023;1.63e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.54e-29,56;UBERON:0005068,9.54e-29,56;UBERON:0006241,9.54e-29,56;UBERON:0007135,9.54e-29,56;UBERON:0000073,8.37e-28,53;UBERON:0002616,8.37e-28,53;UBERON:0000955,2.59e-24,68;UBERON:0006238,2.59e-24,68;UBERON:0001017,1.82e-23,81;UBERON:0007023,5.65e-22,114;UBERON:0001016,1.60e-20,89;UBERON:0002780,1.58e-18,41;UBERON:0001890,1.58e-18,41;UBERON:0003080,1.58e-18,41;UBERON:0006240,1.58e-18,41;UBERON:0000349,4.77e-18,5;UBERON:0003075,6.83e-18,82;UBERON:0007284,6.83e-18,82;UBERON:0002346,8.38e-17,86;UBERON:0002298,1.45e-16,6;UBERON:0000369,1.04e-15,4;UBERON:0002435,1.04e-15,4;UBERON:0000204,1.04e-15,4;UBERON:0010082,1.04e-15,4;UBERON:0000125,4.68e-15,9;UBERON:0002308,4.68e-15,9;UBERON:0003528,5.38e-15,34;UBERON:0002020,5.38e-15,34;UBERON:0002420,2.29e-14,9;UBERON:0007245,2.29e-14,9;UBERON:0010009,2.29e-14,9;UBERON:0010011,2.29e-14,9;UBERON:0000454,2.29e-14,9;UBERON:0010371,6.02e-13,104;UBERON:0001896,1.03e-12,3;UBERON:0005290,1.03e-12,3;UBERON:0010096,1.03e-12,3;UBERON:0001893,1.39e-12,34;UBERON:0011216,2.66e-12,223;UBERON:0005383,3.45e-12,3;UBERON:0005382,3.45e-12,3;UBERON:0000025,8.08e-12,192;UBERON:0003076,1.05e-11,15;UBERON:0003057,1.05e-11,15;UBERON:0003056,2.53e-11,61;UBERON:0002791,3.50e-11,32;UBERON:0001869,3.50e-11,32;UBERON:0004733,4.45e-11,12;UBERON:0002028,4.45e-11,12;UBERON:0007277,4.45e-11,12;UBERON:0004732,3.60e-10,13;UBERON:0001873,4.42e-09,2;UBERON:0010122,4.42e-09,2;UBERON:0010314,4.55e-09,132;UBERON:0009663,5.48e-09,7;UBERON:0002148,5.80e-09,2;UBERON:0006331,5.80e-09,2;UBERON:0009662,5.80e-09,2;UBERON:0003127,6.76e-09,2;UBERON:0000341,1.39e-08,2;UBERON:0001897,1.61e-08,2;UBERON:0010225,1.61e-08,2;UBERON:0001894,1.71e-08,7;UBERON:0006222,1.71e-08,7;UBERON:0001954,2.51e-08,2;UBERON:0003022,2.51e-08,2;UBERON:0002421,2.51e-08,2;UBERON:0002600,2.51e-08,2;UBERON:0004111,5.47e-08,240;UBERON:0004121,6.55e-08,171;UBERON:0000924,6.55e-08,171;UBERON:0006601,6.55e-08,171;UBERON:0001876,6.69e-08,2 | |||
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|short_description=p1@CCDC42B | |short_description=p1@CCDC42B | ||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p1@CCDC42B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC42B_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -106bp_to_ENST00000335621, NM_001144872, uc010sys.1_5end |
EntrezGene: | CCDC42B |
HGNC: | 37100 |
UniProt: | A6NFT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.06e-07 | 2 |