FFCP PHASE1:Mm9::chr4:154719787..154719798,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18762|HGNC=|MCL_coexpression_id=401|UniProt=Q3V341|association_with_transcript=82bp_to_ENSMUST00000103178,NM_001039079,uc008wdc.1_5end|description=CAGE_peak_5_at_Prkcz_5end|id=chr4:154719787..154719798,-|ontology_enrichment_celltype=CL:0000117!1.36e-23!23;CL:0000337!1.36e-23!23;CL:0000540!7.33e-23!33;CL:0000047!7.33e-23!33;CL:0000031!7.33e-23!33;CL:0000404!7.33e-23!33;CL:0000393!9.54e-18!39;CL:0000211!9.54e-18!39;CL:0002319!3.70e-16!43;CL:0000221!1.47e-15!44;CL:0000133!1.47e-15!44;CL:0000055!1.70e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.54e-30,23;CL:0000337,2.54e-30,23;CL:0000540,4.46e-20,33;CL:0000047,4.46e-20,33;CL:0000031,4.46e-20,33;CL:0000404,4.46e-20,33;CL:0000393,1.88e-16,39;CL:0000211,1.88e-16,39;CL:0002319,1.34e-14,43;CL:0000221,3.45e-14,44;CL:0000133,3.45e-14,44;CL:0002610,3.82e-10,3;CL:0002612,8.68e-10,3;CL:0002614,3.75e-09,3;CL:0002321,1.18e-07,70;CL:0002611,2.31e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.72e-34!73;UBERON:0005743!4.72e-34!73;UBERON:0000073!7.86e-34!75;UBERON:0001016!7.86e-34!75;UBERON:0002346!6.80e-33!71;UBERON:0003075!6.80e-33!71;UBERON:0007284!6.80e-33!71;UBERON:0004121!6.49e-31!102;UBERON:0000924!6.49e-31!102;UBERON:0006601!6.49e-31!102;UBERON:0001049!3.42e-28!52;UBERON:0005068!3.42e-28!52;UBERON:0006241!3.42e-28!52;UBERON:0007135!3.42e-28!52;UBERON:0000033!1.42e-27!63;UBERON:0002020!6.55e-26!34;UBERON:0000955!1.07e-25!50;UBERON:0006238!1.07e-25!50;UBERON:0002616!6.00e-25!49;UBERON:0003056!1.85e-22!49;UBERON:0002791!3.09e-20!29;UBERON:0003528!3.09e-20!29;UBERON:0001893!3.09e-20!29;UBERON:0003080!3.65e-19!40;UBERON:0002780!3.30e-18!39;UBERON:0001890!3.30e-18!39;UBERON:0006240!3.30e-18!39;UBERON:0007811!4.92e-16!86;UBERON:0000153!2.05e-13!94;UBERON:0000956!1.78e-12!21;UBERON:0001869!1.78e-12!21;UBERON:0000203!1.78e-12!21;UBERON:0002619!2.87e-10!17;UBERON:0003076!1.24e-09!12;UBERON:0003057!1.24e-09!12;UBERON:0002420!2.55e-09!8;UBERON:0007245!2.55e-09!8;UBERON:0010009!2.55e-09!8;UBERON:0010011!2.55e-09!8;UBERON:0000454!2.55e-09!8;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0002240!4.25e-08!6;UBERON:0005174!4.25e-08!6;UBERON:0001137!4.25e-08!6;UBERON:0002298!2.84e-07!6;UBERON:0001948!4.57e-07!5;UBERON:0002315!4.57e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-37,54;UBERON:0001017,1.03e-33,73;UBERON:0001049,7.71e-33,52;UBERON:0005068,7.71e-33,52;UBERON:0006241,7.71e-33,52;UBERON:0007135,7.71e-33,52;UBERON:0001016,1.14e-32,75;UBERON:0002020,1.02e-26,34;UBERON:0002346,9.97e-26,64;UBERON:0003075,9.97e-26,64;UBERON:0007284,9.97e-26,64;UBERON:0004121,1.17e-24,95;UBERON:0000924,1.17e-24,95;UBERON:0006601,1.17e-24,95;UBERON:0010371,6.35e-22,73;UBERON:0002616,1.29e-20,46;UBERON:0000955,4.36e-20,47;UBERON:0006238,4.36e-20,47;UBERON:0003076,2.03e-19,12;UBERON:0003057,2.03e-19,12;UBERON:0002240,4.04e-18,6;UBERON:0005174,4.04e-18,6;UBERON:0001137,4.04e-18,6;UBERON:0003080,1.02e-16,40;UBERON:0002420,1.07e-16,8;UBERON:0007245,1.07e-16,8;UBERON:0010009,1.07e-16,8;UBERON:0010011,1.07e-16,8;UBERON:0000454,1.07e-16,8;UBERON:0010314,2.51e-16,92;UBERON:0003528,4.02e-16,29;UBERON:0002791,4.02e-16,29;UBERON:0001893,4.02e-16,29;UBERON:0001948,1.62e-15,5;UBERON:0002315,1.62e-15,5;UBERON:0002780,4.49e-15,39;UBERON:0001890,4.49e-15,39;UBERON:0006240,4.49e-15,39;UBERON:0003056,5.38e-13,49;UBERON:0000025,3.61e-12,114;UBERON:0002950,1.22e-11,4;UBERON:0001891,1.22e-11,4;UBERON:0009616,1.22e-11,4;UBERON:0010286,1.22e-11,4;UBERON:0004111,5.01e-11,122;UBERON:0004684,3.82e-10,3;UBERON:0002275,3.82e-10,3;UBERON:0002257,8.68e-10,3;UBERON:0002021,1.45e-09,10;UBERON:0000411,1.45e-09,10;UBERON:0001950,1.45e-09,10;UBERON:0000369,2.36e-09,5;UBERON:0002435,2.36e-09,5;UBERON:0000204,2.36e-09,5;UBERON:0010082,2.36e-09,5;UBERON:0011216,3.24e-09,194;UBERON:0002038,3.75e-09,3;UBERON:0009663,3.75e-09,3;UBERON:0009661,3.75e-09,3;UBERON:0000125,3.75e-09,3;UBERON:0002308,3.75e-09,3;UBERON:0002256,2.31e-07,2;UBERON:0002619,4.02e-07,17|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.210324961351382,3.14216082844184,3.09215957332259,0.489963196859816,1.0543001812006,0.919218786610021,3.30347642998166,3.06449611404451,2.76491759861238,0.659431438650969,3.11057988248193,1.04182674111352,2.51264699101243,1.68828783009504,1.37518422999129,2.65165726926301,2.98980529678116,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,4.09893115816166,3.35114730901528,0,0,0,0,1.64769703345305,1.83000241127451,1.63350657746724,0.173824320192276,0.255715457330331,1.24672826735736,2.10913641988085,0,0,0,0,0,0.459804208866946,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0.685082519770642,1.5107877947794,1.35004500046361,3.15224842256954,1.35942722695261,1.55328093525546,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.376437521661322,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0.619747364743864,0,0,0.233931608445408,0,0,0,0|short_description=p5@Prkcz}} | ||
|EntrezGene=18762 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|UniProt=Q3V341 | |||
|association_with_transcript=82bp_to_ENSMUST00000103178,NM_001039079,uc008wdc.1_5end | |||
|description=CAGE_peak_5_at_Prkcz_5end | |||
|id=chr4:154719787..154719798,- | |||
|ontology_enrichment_celltype=CL:0000117!1.36e-23!23;CL:0000337!1.36e-23!23;CL:0000540!7.33e-23!33;CL:0000047!7.33e-23!33;CL:0000031!7.33e-23!33;CL:0000404!7.33e-23!33;CL:0000393!9.54e-18!39;CL:0000211!9.54e-18!39;CL:0002319!3.70e-16!43;CL:0000221!1.47e-15!44;CL:0000133!1.47e-15!44;CL:0000055!1.70e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.54e-30,23;CL:0000337,2.54e-30,23;CL:0000540,4.46e-20,33;CL:0000047,4.46e-20,33;CL:0000031,4.46e-20,33;CL:0000404,4.46e-20,33;CL:0000393,1.88e-16,39;CL:0000211,1.88e-16,39;CL:0002319,1.34e-14,43;CL:0000221,3.45e-14,44;CL:0000133,3.45e-14,44;CL:0002610,3.82e-10,3;CL:0002612,8.68e-10,3;CL:0002614,3.75e-09,3;CL:0002321,1.18e-07,70;CL:0002611,2.31e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.72e-34!73;UBERON:0005743!4.72e-34!73;UBERON:0000073!7.86e-34!75;UBERON:0001016!7.86e-34!75;UBERON:0002346!6.80e-33!71;UBERON:0003075!6.80e-33!71;UBERON:0007284!6.80e-33!71;UBERON:0004121!6.49e-31!102;UBERON:0000924!6.49e-31!102;UBERON:0006601!6.49e-31!102;UBERON:0001049!3.42e-28!52;UBERON:0005068!3.42e-28!52;UBERON:0006241!3.42e-28!52;UBERON:0007135!3.42e-28!52;UBERON:0000033!1.42e-27!63;UBERON:0002020!6.55e-26!34;UBERON:0000955!1.07e-25!50;UBERON:0006238!1.07e-25!50;UBERON:0002616!6.00e-25!49;UBERON:0003056!1.85e-22!49;UBERON:0002791!3.09e-20!29;UBERON:0003528!3.09e-20!29;UBERON:0001893!3.09e-20!29;UBERON:0003080!3.65e-19!40;UBERON:0002780!3.30e-18!39;UBERON:0001890!3.30e-18!39;UBERON:0006240!3.30e-18!39;UBERON:0007811!4.92e-16!86;UBERON:0000153!2.05e-13!94;UBERON:0000956!1.78e-12!21;UBERON:0001869!1.78e-12!21;UBERON:0000203!1.78e-12!21;UBERON:0002619!2.87e-10!17;UBERON:0003076!1.24e-09!12;UBERON:0003057!1.24e-09!12;UBERON:0002420!2.55e-09!8;UBERON:0007245!2.55e-09!8;UBERON:0010009!2.55e-09!8;UBERON:0010011!2.55e-09!8;UBERON:0000454!2.55e-09!8;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0002240!4.25e-08!6;UBERON:0005174!4.25e-08!6;UBERON:0001137!4.25e-08!6;UBERON:0002298!2.84e-07!6;UBERON:0001948!4.57e-07!5;UBERON:0002315!4.57e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-37,54;UBERON:0001017,1.03e-33,73;UBERON:0001049,7.71e-33,52;UBERON:0005068,7.71e-33,52;UBERON:0006241,7.71e-33,52;UBERON:0007135,7.71e-33,52;UBERON:0001016,1.14e-32,75;UBERON:0002020,1.02e-26,34;UBERON:0002346,9.97e-26,64;UBERON:0003075,9.97e-26,64;UBERON:0007284,9.97e-26,64;UBERON:0004121,1.17e-24,95;UBERON:0000924,1.17e-24,95;UBERON:0006601,1.17e-24,95;UBERON:0010371,6.35e-22,73;UBERON:0002616,1.29e-20,46;UBERON:0000955,4.36e-20,47;UBERON:0006238,4.36e-20,47;UBERON:0003076,2.03e-19,12;UBERON:0003057,2.03e-19,12;UBERON:0002240,4.04e-18,6;UBERON:0005174,4.04e-18,6;UBERON:0001137,4.04e-18,6;UBERON:0003080,1.02e-16,40;UBERON:0002420,1.07e-16,8;UBERON:0007245,1.07e-16,8;UBERON:0010009,1.07e-16,8;UBERON:0010011,1.07e-16,8;UBERON:0000454,1.07e-16,8;UBERON:0010314,2.51e-16,92;UBERON:0003528,4.02e-16,29;UBERON:0002791,4.02e-16,29;UBERON:0001893,4.02e-16,29;UBERON:0001948,1.62e-15,5;UBERON:0002315,1.62e-15,5;UBERON:0002780,4.49e-15,39;UBERON:0001890,4.49e-15,39;UBERON:0006240,4.49e-15,39;UBERON:0003056,5.38e-13,49;UBERON:0000025,3.61e-12,114;UBERON:0002950,1.22e-11,4;UBERON:0001891,1.22e-11,4;UBERON:0009616,1.22e-11,4;UBERON:0010286,1.22e-11,4;UBERON:0004111,5.01e-11,122;UBERON:0004684,3.82e-10,3;UBERON:0002275,3.82e-10,3;UBERON:0002257,8.68e-10,3;UBERON:0002021,1.45e-09,10;UBERON:0000411,1.45e-09,10;UBERON:0001950,1.45e-09,10;UBERON:0000369,2.36e-09,5;UBERON:0002435,2.36e-09,5;UBERON:0000204,2.36e-09,5;UBERON:0010082,2.36e-09,5;UBERON:0011216,3.24e-09,194;UBERON:0002038,3.75e-09,3;UBERON:0009663,3.75e-09,3;UBERON:0009661,3.75e-09,3;UBERON:0000125,3.75e-09,3;UBERON:0002308,3.75e-09,3;UBERON:0002256,2.31e-07,2;UBERON:0002619,4.02e-07,17 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.210324961351382,3.14216082844184,3.09215957332259,0.489963196859816,1.0543001812006,0.919218786610021,3.30347642998166,3.06449611404451,2.76491759861238,0.659431438650969,3.11057988248193,1.04182674111352,2.51264699101243,1.68828783009504,1.37518422999129,2.65165726926301,2.98980529678116,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,4.09893115816166,3.35114730901528,0,0,0,0,1.64769703345305,1.83000241127451,1.63350657746724,0.173824320192276,0.255715457330331,1.24672826735736,2.10913641988085,0,0,0,0,0,0.459804208866946,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.468508622798644,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.171853182343688,0.685082519770642,1.5107877947794,1.35004500046361,3.15224842256954,1.35942722695261,1.55328093525546,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0.376437521661322,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0.619747364743864,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p5@Prkcz | |||
}} |
Revision as of 04:40, 14 September 2013
Short description: | p5@Prkcz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Prkcz_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 82bp_to_ENSMUST00000103178, NM_001039079, uc008wdc.1_5end |
EntrezGene: | Prkcz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.54e-30 | 23 |
neuroblast (sensu Vertebrata) | 2.54e-30 | 23 |
neuron | 4.46e-20 | 33 |
neuronal stem cell | 4.46e-20 | 33 |
neuroblast | 4.46e-20 | 33 |
electrically signaling cell | 4.46e-20 | 33 |
electrically responsive cell | 1.88e-16 | 39 |
electrically active cell | 1.88e-16 | 39 |
neural cell | 1.34e-14 | 43 |
ectodermal cell | 3.45e-14 | 44 |
neurectodermal cell | 3.45e-14 | 44 |
raphe nuclei neuron | 3.82e-10 | 3 |
neuron of the ventral spinal cord | 8.68e-10 | 3 |
neuron of the substantia nigra | 3.75e-09 | 3 |
embryonic cell | 1.18e-07 | 70 |
neuron of the dorsal spinal cord | 2.31e-07 | 2 |
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