FFCP PHASE1:Mm9::chr12:91407475..91407480,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:91407475..91407480,+|id=chr12:91407475..91407480,+|ontology_enrichment_celltype=CL:0000117!6.69e-15!23;CL:0000337!6.69e-15!23;CL:0000540!9.14e-12!33;CL:0000047!9.14e-12!33;CL:0000031!9.14e-12!33;CL:0000404!9.14e-12!33;CL:0000393!6.55e-09!39;CL:0000211!6.55e-09!39;CL:0000221!5.85e-08!44;CL:0000133!5.85e-08!44;CL:0002319!1.75e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-14,23;CL:0000337,1.76e-14,23;CL:0000540,2.42e-09,33;CL:0000047,2.42e-09,33;CL:0000031,2.42e-09,33;CL:0000404,2.42e-09,33;CL:0002614,3.05e-09,3;CL:0002610,7.75e-09,3;CL:0000393,1.55e-07,39;CL:0000211,1.55e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-29!73;UBERON:0005743!1.25e-29!73;UBERON:0000073!2.18e-28!75;UBERON:0001016!2.18e-28!75;UBERON:0001049!3.97e-28!52;UBERON:0005068!3.97e-28!52;UBERON:0006241!3.97e-28!52;UBERON:0007135!3.97e-28!52;UBERON:0000033!2.64e-27!63;UBERON:0000955!1.21e-26!50;UBERON:0006238!1.21e-26!50;UBERON:0002346!2.61e-26!71;UBERON:0003075!2.61e-26!71;UBERON:0007284!2.61e-26!71;UBERON:0002616!1.92e-25!49;UBERON:0004121!1.81e-23!102;UBERON:0000924!1.81e-23!102;UBERON:0006601!1.81e-23!102;UBERON:0002020!4.43e-22!34;UBERON:0003056!1.50e-21!49;UBERON:0003080!1.34e-19!40;UBERON:0002780!1.31e-18!39;UBERON:0001890!1.31e-18!39;UBERON:0006240!1.31e-18!39;UBERON:0002791!2.98e-17!29;UBERON:0003528!2.98e-17!29;UBERON:0001893!2.98e-17!29;UBERON:0007811!4.84e-16!86;UBERON:0000153!1.77e-13!94;UBERON:0002021!8.86e-12!10;UBERON:0000411!8.86e-12!10;UBERON:0001950!8.86e-12!10;UBERON:0002619!7.11e-10!17;UBERON:0000956!8.66e-10!21;UBERON:0001869!8.66e-10!21;UBERON:0000203!8.66e-10!21;UBERON:0002420!1.89e-09!8;UBERON:0007245!1.89e-09!8;UBERON:0010009!1.89e-09!8;UBERON:0010011!1.89e-09!8;UBERON:0000454!1.89e-09!8;UBERON:0003076!4.70e-09!12;UBERON:0003057!4.70e-09!12;UBERON:0000025!3.06e-08!114;UBERON:0002298!6.93e-08!6;UBERON:0004111!1.97e-07!122;UBERON:0002240!3.44e-07!6;UBERON:0005174!3.44e-07!6;UBERON:0001137!3.44e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.91e-37,54;UBERON:0001049,1.94e-32,52;UBERON:0005068,1.94e-32,52;UBERON:0006241,1.94e-32,52;UBERON:0007135,1.94e-32,52;UBERON:0001017,4.93e-30,73;UBERON:0001016,4.52e-29,75;UBERON:0002346,2.46e-27,64;UBERON:0003075,2.46e-27,64;UBERON:0007284,2.46e-27,64;UBERON:0000955,6.02e-26,47;UBERON:0006238,6.02e-26,47;UBERON:0002020,1.13e-24,34;UBERON:0002616,6.29e-24,46;UBERON:0004121,2.75e-23,95;UBERON:0000924,2.75e-23,95;UBERON:0006601,2.75e-23,95;UBERON:0010371,3.00e-23,73;UBERON:0003080,4.33e-18,40;UBERON:0003528,5.48e-18,29;UBERON:0002791,5.48e-18,29;UBERON:0001893,5.48e-18,29;UBERON:0010314,3.06e-17,92;UBERON:0002780,1.80e-16,39;UBERON:0001890,1.80e-16,39;UBERON:0006240,1.80e-16,39;UBERON:0003076,2.11e-16,12;UBERON:0003057,2.11e-16,12;UBERON:0003056,1.07e-15,49;UBERON:0002021,3.62e-13,10;UBERON:0000411,3.62e-13,10;UBERON:0001950,3.62e-13,10;UBERON:0000025,7.56e-13,114;UBERON:0002420,1.11e-11,8;UBERON:0007245,1.11e-11,8;UBERON:0010009,1.11e-11,8;UBERON:0010011,1.11e-11,8;UBERON:0000454,1.11e-11,8;UBERON:0004111,1.28e-11,122;UBERON:0002950,1.59e-11,4;UBERON:0001891,1.59e-11,4;UBERON:0009616,1.59e-11,4;UBERON:0010286,1.59e-11,4;UBERON:0002240,1.22e-10,6;UBERON:0005174,1.22e-10,6;UBERON:0001137,1.22e-10,6;UBERON:0002619,2.37e-09,17;UBERON:0002038,3.05e-09,3;UBERON:0009663,3.05e-09,3;UBERON:0009661,3.05e-09,3;UBERON:0000125,3.05e-09,3;UBERON:0002308,3.05e-09,3;UBERON:0000956,4.47e-09,21;UBERON:0001869,4.47e-09,21;UBERON:0000203,4.47e-09,21;UBERON:0004684,7.75e-09,3;UBERON:0002275,7.75e-09,3;UBERON:0001948,1.28e-08,5;UBERON:0002315,1.28e-08,5;UBERON:0011216,3.25e-08,194;UBERON:0004733,1.93e-07,6;UBERON:0004732,1.93e-07,6;UBERON:0002028,1.93e-07,6;UBERON:0007277,1.93e-07,6;UBERON:0000483,4.41e-07,174;UBERON:0000119,6.23e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.270011876663381,0,1.14260393761521,1.10434270475807,0,1.24599112323707,0,1.10115880999389,2.93680877595932,2.4577045320999,0.527545150920775,1.28082701043374,0.52091337055676,2.23346399201105,2.25105044012672,3.66715794664344,2.06240009831567,3.41692033917847,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,2.72280718857492,0,0,0,0,1.49790639404823,1.83000241127451,1.13088916901578,1.04294592115366,2.30143911597297,2.0778804455956,1.46017136760982,0.203678727700633,0,0,0.420883711772948,0,0,0,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.05490517932983,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,3.43737308063638,2.23409137046794,0.685082519770642,2.2661816921691,1.35004500046361,4.95353323546643,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0,0.376437521661322,0.169229215783353,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0|short_description=p@chr12:91407475..91407480,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:91407475..91407480,+ | |||
|id=chr12:91407475..91407480,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.69e-15!23;CL:0000337!6.69e-15!23;CL:0000540!9.14e-12!33;CL:0000047!9.14e-12!33;CL:0000031!9.14e-12!33;CL:0000404!9.14e-12!33;CL:0000393!6.55e-09!39;CL:0000211!6.55e-09!39;CL:0000221!5.85e-08!44;CL:0000133!5.85e-08!44;CL:0002319!1.75e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-14,23;CL:0000337,1.76e-14,23;CL:0000540,2.42e-09,33;CL:0000047,2.42e-09,33;CL:0000031,2.42e-09,33;CL:0000404,2.42e-09,33;CL:0002614,3.05e-09,3;CL:0002610,7.75e-09,3;CL:0000393,1.55e-07,39;CL:0000211,1.55e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-29!73;UBERON:0005743!1.25e-29!73;UBERON:0000073!2.18e-28!75;UBERON:0001016!2.18e-28!75;UBERON:0001049!3.97e-28!52;UBERON:0005068!3.97e-28!52;UBERON:0006241!3.97e-28!52;UBERON:0007135!3.97e-28!52;UBERON:0000033!2.64e-27!63;UBERON:0000955!1.21e-26!50;UBERON:0006238!1.21e-26!50;UBERON:0002346!2.61e-26!71;UBERON:0003075!2.61e-26!71;UBERON:0007284!2.61e-26!71;UBERON:0002616!1.92e-25!49;UBERON:0004121!1.81e-23!102;UBERON:0000924!1.81e-23!102;UBERON:0006601!1.81e-23!102;UBERON:0002020!4.43e-22!34;UBERON:0003056!1.50e-21!49;UBERON:0003080!1.34e-19!40;UBERON:0002780!1.31e-18!39;UBERON:0001890!1.31e-18!39;UBERON:0006240!1.31e-18!39;UBERON:0002791!2.98e-17!29;UBERON:0003528!2.98e-17!29;UBERON:0001893!2.98e-17!29;UBERON:0007811!4.84e-16!86;UBERON:0000153!1.77e-13!94;UBERON:0002021!8.86e-12!10;UBERON:0000411!8.86e-12!10;UBERON:0001950!8.86e-12!10;UBERON:0002619!7.11e-10!17;UBERON:0000956!8.66e-10!21;UBERON:0001869!8.66e-10!21;UBERON:0000203!8.66e-10!21;UBERON:0002420!1.89e-09!8;UBERON:0007245!1.89e-09!8;UBERON:0010009!1.89e-09!8;UBERON:0010011!1.89e-09!8;UBERON:0000454!1.89e-09!8;UBERON:0003076!4.70e-09!12;UBERON:0003057!4.70e-09!12;UBERON:0000025!3.06e-08!114;UBERON:0002298!6.93e-08!6;UBERON:0004111!1.97e-07!122;UBERON:0002240!3.44e-07!6;UBERON:0005174!3.44e-07!6;UBERON:0001137!3.44e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.91e-37,54;UBERON:0001049,1.94e-32,52;UBERON:0005068,1.94e-32,52;UBERON:0006241,1.94e-32,52;UBERON:0007135,1.94e-32,52;UBERON:0001017,4.93e-30,73;UBERON:0001016,4.52e-29,75;UBERON:0002346,2.46e-27,64;UBERON:0003075,2.46e-27,64;UBERON:0007284,2.46e-27,64;UBERON:0000955,6.02e-26,47;UBERON:0006238,6.02e-26,47;UBERON:0002020,1.13e-24,34;UBERON:0002616,6.29e-24,46;UBERON:0004121,2.75e-23,95;UBERON:0000924,2.75e-23,95;UBERON:0006601,2.75e-23,95;UBERON:0010371,3.00e-23,73;UBERON:0003080,4.33e-18,40;UBERON:0003528,5.48e-18,29;UBERON:0002791,5.48e-18,29;UBERON:0001893,5.48e-18,29;UBERON:0010314,3.06e-17,92;UBERON:0002780,1.80e-16,39;UBERON:0001890,1.80e-16,39;UBERON:0006240,1.80e-16,39;UBERON:0003076,2.11e-16,12;UBERON:0003057,2.11e-16,12;UBERON:0003056,1.07e-15,49;UBERON:0002021,3.62e-13,10;UBERON:0000411,3.62e-13,10;UBERON:0001950,3.62e-13,10;UBERON:0000025,7.56e-13,114;UBERON:0002420,1.11e-11,8;UBERON:0007245,1.11e-11,8;UBERON:0010009,1.11e-11,8;UBERON:0010011,1.11e-11,8;UBERON:0000454,1.11e-11,8;UBERON:0004111,1.28e-11,122;UBERON:0002950,1.59e-11,4;UBERON:0001891,1.59e-11,4;UBERON:0009616,1.59e-11,4;UBERON:0010286,1.59e-11,4;UBERON:0002240,1.22e-10,6;UBERON:0005174,1.22e-10,6;UBERON:0001137,1.22e-10,6;UBERON:0002619,2.37e-09,17;UBERON:0002038,3.05e-09,3;UBERON:0009663,3.05e-09,3;UBERON:0009661,3.05e-09,3;UBERON:0000125,3.05e-09,3;UBERON:0002308,3.05e-09,3;UBERON:0000956,4.47e-09,21;UBERON:0001869,4.47e-09,21;UBERON:0000203,4.47e-09,21;UBERON:0004684,7.75e-09,3;UBERON:0002275,7.75e-09,3;UBERON:0001948,1.28e-08,5;UBERON:0002315,1.28e-08,5;UBERON:0011216,3.25e-08,194;UBERON:0004733,1.93e-07,6;UBERON:0004732,1.93e-07,6;UBERON:0002028,1.93e-07,6;UBERON:0007277,1.93e-07,6;UBERON:0000483,4.41e-07,174;UBERON:0000119,6.23e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.270011876663381,0,1.14260393761521,1.10434270475807,0,1.24599112323707,0,1.10115880999389,2.93680877595932,2.4577045320999,0.527545150920775,1.28082701043374,0.52091337055676,2.23346399201105,2.25105044012672,3.66715794664344,2.06240009831567,3.41692033917847,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51336956413857,2.72280718857492,0,0,0,0,1.49790639404823,1.83000241127451,1.13088916901578,1.04294592115366,2.30143911597297,2.0778804455956,1.46017136760982,0.203678727700633,0,0,0.420883711772948,0,0,0,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.05490517932983,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,3.43737308063638,2.23409137046794,0.685082519770642,2.2661816921691,1.35004500046361,4.95353323546643,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0,0,0.588795680537589,0,0.354951612318675,0.238436189947321,0,0.376437521661322,0.169229215783353,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0,0.197008964751127,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr12:91407475..91407480,+ | |||
}} |
Revision as of 23:36, 12 September 2013
Short description: | p@chr12:91407475..91407480, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:91407475..91407480, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-14 | 23 |
neuron | 2.42e-09 | 33 |
neuronal stem cell | 2.42e-09 | 33 |
neuroblast | 2.42e-09 | 33 |
electrically signaling cell | 2.42e-09 | 33 |
neuron of the substantia nigra | 3.05e-09 | 3 |
raphe nuclei neuron | 7.75e-09 | 3 |
electrically responsive cell | 1.55e-07 | 39 |
electrically active cell | 1.55e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.