FFCP PHASE1:Mm9::chr11:78137906..78137917,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=607|UniProt=|association_with_transcript=78bp_to_ENSMUST00000128032_5end|description=CAGE_peak_13_at_Aldoc_5end|id=chr11:78137906..78137917,+|ontology_enrichment_celltype=CL:0000117!1.24e-10!23;CL:0000337!1.24e-10!23;CL:0000221!3.25e-09!44;CL:0000133!3.25e-09!44;CL:0002319!1.43e-08!43;CL:0000055!1.67e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-12,23;CL:0000337,1.45e-12,23;CL:0002614,1.74e-10,3;CL:0002610,2.91e-10,3;CL:0002611,2.90e-08,2;CL:0000540,3.24e-08,33;CL:0000047,3.24e-08,33;CL:0000031,3.24e-08,33;CL:0000404,3.24e-08,33;CL:0002319,2.84e-07,43;CL:0000221,4.61e-07,44;CL:0000133,4.61e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.01e-36!52;UBERON:0005068!7.01e-36!52;UBERON:0006241!7.01e-36!52;UBERON:0007135!7.01e-36!52;UBERON:0000955!1.07e-32!50;UBERON:0006238!1.07e-32!50;UBERON:0001017!1.70e-32!73;UBERON:0005743!1.70e-32!73;UBERON:0002616!1.51e-31!49;UBERON:0000073!2.67e-31!75;UBERON:0001016!2.67e-31!75;UBERON:0002020!1.30e-27!34;UBERON:0000033!3.20e-25!63;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0004121!4.50e-22!102;UBERON:0000924!4.50e-22!102;UBERON:0006601!4.50e-22!102;UBERON:0003080!1.48e-21!40;UBERON:0002791!1.02e-20!29;UBERON:0003528!1.02e-20!29;UBERON:0001893!1.02e-20!29;UBERON:0002780!2.15e-20!39;UBERON:0001890!2.15e-20!39;UBERON:0006240!2.15e-20!39;UBERON:0003056!3.73e-16!49;UBERON:0007811!1.14e-15!86;UBERON:0003076!1.70e-15!12;UBERON:0003057!1.70e-15!12;UBERON:0000956!2.56e-15!21;UBERON:0001869!2.56e-15!21;UBERON:0000203!2.56e-15!21;UBERON:0002021!6.11e-15!10;UBERON:0000411!6.11e-15!10;UBERON:0001950!6.11e-15!10;UBERON:0000153!1.82e-13!94;UBERON:0002619!2.02e-13!17;UBERON:0000025!3.48e-12!114;UBERON:0004111!1.99e-11!122;UBERON:0002298!1.98e-10!6;UBERON:0002240!3.95e-10!6;UBERON:0005174!3.95e-10!6;UBERON:0001137!3.95e-10!6;UBERON:0001948!1.47e-08!5;UBERON:0002315!1.47e-08!5;UBERON:0002950!3.43e-07!4;UBERON:0001891!3.43e-07!4;UBERON:0009616!3.43e-07!4;UBERON:0000064!3.66e-07!99;UBERON:0004733!4.78e-07!6;UBERON:0004732!4.78e-07!6;UBERON:0002028!4.78e-07!6;UBERON:0007277!4.78e-07!6;UBERON:0000477!7.28e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-36,54;UBERON:0001049,1.23e-31,52;UBERON:0005068,1.23e-31,52;UBERON:0006241,1.23e-31,52;UBERON:0007135,1.23e-31,52;UBERON:0001017,6.52e-28,73;UBERON:0001016,4.80e-27,75;UBERON:0002346,7.12e-25,64;UBERON:0003075,7.12e-25,64;UBERON:0007284,7.12e-25,64;UBERON:0002616,1.89e-21,46;UBERON:0010371,2.96e-21,73;UBERON:0003076,2.97e-21,12;UBERON:0003057,2.97e-21,12;UBERON:0002020,3.40e-21,34;UBERON:0000955,6.50e-21,47;UBERON:0006238,6.50e-21,47;UBERON:0004121,2.27e-20,95;UBERON:0000924,2.27e-20,95;UBERON:0006601,2.27e-20,95;UBERON:0002021,5.56e-19,10;UBERON:0000411,5.56e-19,10;UBERON:0001950,5.56e-19,10;UBERON:0010314,6.27e-16,92;UBERON:0003080,6.88e-15,40;UBERON:0002240,5.89e-14,6;UBERON:0005174,5.89e-14,6;UBERON:0001137,5.89e-14,6;UBERON:0002619,1.05e-13,17;UBERON:0003528,1.21e-13,29;UBERON:0002791,1.21e-13,29;UBERON:0001893,1.21e-13,29;UBERON:0002780,2.49e-13,39;UBERON:0001890,2.49e-13,39;UBERON:0006240,2.49e-13,39;UBERON:0002950,5.90e-13,4;UBERON:0001891,5.90e-13,4;UBERON:0009616,5.90e-13,4;UBERON:0010286,5.90e-13,4;UBERON:0000025,5.74e-12,114;UBERON:0003056,1.32e-11,49;UBERON:0001948,6.46e-11,5;UBERON:0002315,6.46e-11,5;UBERON:0004111,7.04e-11,122;UBERON:0000956,8.15e-11,21;UBERON:0001869,8.15e-11,21;UBERON:0000203,8.15e-11,21;UBERON:0002038,1.74e-10,3;UBERON:0009663,1.74e-10,3;UBERON:0009661,1.74e-10,3;UBERON:0000125,1.74e-10,3;UBERON:0002308,1.74e-10,3;UBERON:0004684,2.91e-10,3;UBERON:0002275,2.91e-10,3;UBERON:0004733,4.38e-09,6;UBERON:0004732,4.38e-09,6;UBERON:0002028,4.38e-09,6;UBERON:0007277,4.38e-09,6;UBERON:0002256,2.90e-08,2;UBERON:0001896,3.40e-08,2;UBERON:0002298,3.40e-08,2;UBERON:0005290,3.40e-08,2;UBERON:0010096,3.40e-08,2;UBERON:0011216,1.76e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,2.85592037554813,0.972149495371417,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,4.85606673486466,4.19650227808066,0,0,0,2.20231761998777,2.42605942361857,1.53606533256243,0,0,0.52091337055676,3.62937898701795,2.25105044012672,1.68078072554491,1.47314292736834,1.85083185038834,0.372798891650601,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,1.19832511523858,0.915001205637253,0.125654352112864,0.869121600961382,2.30143911597297,2.0778804455956,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=11676 | |||
|HGNC= | |||
|MCL_coexpression_id=607 | |||
|UniProt= | |||
|association_with_transcript=78bp_to_ENSMUST00000128032_5end | |||
|description=CAGE_peak_13_at_Aldoc_5end | |||
|id=chr11:78137906..78137917,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-10!23;CL:0000337!1.24e-10!23;CL:0000221!3.25e-09!44;CL:0000133!3.25e-09!44;CL:0002319!1.43e-08!43;CL:0000055!1.67e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-12,23;CL:0000337,1.45e-12,23;CL:0002614,1.74e-10,3;CL:0002610,2.91e-10,3;CL:0002611,2.90e-08,2;CL:0000540,3.24e-08,33;CL:0000047,3.24e-08,33;CL:0000031,3.24e-08,33;CL:0000404,3.24e-08,33;CL:0002319,2.84e-07,43;CL:0000221,4.61e-07,44;CL:0000133,4.61e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.01e-36!52;UBERON:0005068!7.01e-36!52;UBERON:0006241!7.01e-36!52;UBERON:0007135!7.01e-36!52;UBERON:0000955!1.07e-32!50;UBERON:0006238!1.07e-32!50;UBERON:0001017!1.70e-32!73;UBERON:0005743!1.70e-32!73;UBERON:0002616!1.51e-31!49;UBERON:0000073!2.67e-31!75;UBERON:0001016!2.67e-31!75;UBERON:0002020!1.30e-27!34;UBERON:0000033!3.20e-25!63;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0004121!4.50e-22!102;UBERON:0000924!4.50e-22!102;UBERON:0006601!4.50e-22!102;UBERON:0003080!1.48e-21!40;UBERON:0002791!1.02e-20!29;UBERON:0003528!1.02e-20!29;UBERON:0001893!1.02e-20!29;UBERON:0002780!2.15e-20!39;UBERON:0001890!2.15e-20!39;UBERON:0006240!2.15e-20!39;UBERON:0003056!3.73e-16!49;UBERON:0007811!1.14e-15!86;UBERON:0003076!1.70e-15!12;UBERON:0003057!1.70e-15!12;UBERON:0000956!2.56e-15!21;UBERON:0001869!2.56e-15!21;UBERON:0000203!2.56e-15!21;UBERON:0002021!6.11e-15!10;UBERON:0000411!6.11e-15!10;UBERON:0001950!6.11e-15!10;UBERON:0000153!1.82e-13!94;UBERON:0002619!2.02e-13!17;UBERON:0000025!3.48e-12!114;UBERON:0004111!1.99e-11!122;UBERON:0002298!1.98e-10!6;UBERON:0002240!3.95e-10!6;UBERON:0005174!3.95e-10!6;UBERON:0001137!3.95e-10!6;UBERON:0001948!1.47e-08!5;UBERON:0002315!1.47e-08!5;UBERON:0002950!3.43e-07!4;UBERON:0001891!3.43e-07!4;UBERON:0009616!3.43e-07!4;UBERON:0000064!3.66e-07!99;UBERON:0004733!4.78e-07!6;UBERON:0004732!4.78e-07!6;UBERON:0002028!4.78e-07!6;UBERON:0007277!4.78e-07!6;UBERON:0000477!7.28e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-36,54;UBERON:0001049,1.23e-31,52;UBERON:0005068,1.23e-31,52;UBERON:0006241,1.23e-31,52;UBERON:0007135,1.23e-31,52;UBERON:0001017,6.52e-28,73;UBERON:0001016,4.80e-27,75;UBERON:0002346,7.12e-25,64;UBERON:0003075,7.12e-25,64;UBERON:0007284,7.12e-25,64;UBERON:0002616,1.89e-21,46;UBERON:0010371,2.96e-21,73;UBERON:0003076,2.97e-21,12;UBERON:0003057,2.97e-21,12;UBERON:0002020,3.40e-21,34;UBERON:0000955,6.50e-21,47;UBERON:0006238,6.50e-21,47;UBERON:0004121,2.27e-20,95;UBERON:0000924,2.27e-20,95;UBERON:0006601,2.27e-20,95;UBERON:0002021,5.56e-19,10;UBERON:0000411,5.56e-19,10;UBERON:0001950,5.56e-19,10;UBERON:0010314,6.27e-16,92;UBERON:0003080,6.88e-15,40;UBERON:0002240,5.89e-14,6;UBERON:0005174,5.89e-14,6;UBERON:0001137,5.89e-14,6;UBERON:0002619,1.05e-13,17;UBERON:0003528,1.21e-13,29;UBERON:0002791,1.21e-13,29;UBERON:0001893,1.21e-13,29;UBERON:0002780,2.49e-13,39;UBERON:0001890,2.49e-13,39;UBERON:0006240,2.49e-13,39;UBERON:0002950,5.90e-13,4;UBERON:0001891,5.90e-13,4;UBERON:0009616,5.90e-13,4;UBERON:0010286,5.90e-13,4;UBERON:0000025,5.74e-12,114;UBERON:0003056,1.32e-11,49;UBERON:0001948,6.46e-11,5;UBERON:0002315,6.46e-11,5;UBERON:0004111,7.04e-11,122;UBERON:0000956,8.15e-11,21;UBERON:0001869,8.15e-11,21;UBERON:0000203,8.15e-11,21;UBERON:0002038,1.74e-10,3;UBERON:0009663,1.74e-10,3;UBERON:0009661,1.74e-10,3;UBERON:0000125,1.74e-10,3;UBERON:0002308,1.74e-10,3;UBERON:0004684,2.91e-10,3;UBERON:0002275,2.91e-10,3;UBERON:0004733,4.38e-09,6;UBERON:0004732,4.38e-09,6;UBERON:0002028,4.38e-09,6;UBERON:0007277,4.38e-09,6;UBERON:0002256,2.90e-08,2;UBERON:0001896,3.40e-08,2;UBERON:0002298,3.40e-08,2;UBERON:0005290,3.40e-08,2;UBERON:0010096,3.40e-08,2;UBERON:0011216,1.76e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,2.85592037554813,0.972149495371417,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,4.85606673486466,4.19650227808066,0,0,0,2.20231761998777,2.42605942361857,1.53606533256243,0,0,0.52091337055676,3.62937898701795,2.25105044012672,1.68078072554491,1.47314292736834,1.85083185038834,0.372798891650601,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,1.19832511523858,0.915001205637253,0.125654352112864,0.869121600961382,2.30143911597297,2.0778804455956,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,3.69266356971921,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.71868654031819,1.89038500578056,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,2.26571204492102,2.5888015587591,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p13@Aldoc | |||
}} |
Revision as of 21:02, 12 September 2013
Short description: | p13@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:607 |
Association with transcript: | 78bp_to_ENSMUST00000128032_5end |
EntrezGene: | Aldoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-12 | 23 |
neuron of the substantia nigra | 1.74e-10 | 3 |
raphe nuclei neuron | 2.91e-10 | 3 |
neuron of the dorsal spinal cord | 2.90e-08 | 2 |
neuron | 3.24e-08 | 33 |
neuronal stem cell | 3.24e-08 | 33 |
neuroblast | 3.24e-08 | 33 |
electrically signaling cell | 3.24e-08 | 33 |
neural cell | 2.84e-07 | 43 |
ectodermal cell | 4.61e-07 | 44 |
neurectodermal cell | 4.61e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.