FFCP PHASE1:Mm9::chr14:55593026..55593064,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:55593026..55593064,-|id=chr14:55593026..55593064,-|ontology_enrichment_celltype=CL:0000117!4.52e-26!23;CL:0000337!4.52e-26!23;CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000393!8.56e-12!39;CL:0000211!8.56e-12!39;CL:0002319!6.76e-11!43;CL:0000221!1.84e-10!44;CL:0000133!1.84e-10!44;CL:0000055!2.95e-08!50;CL:0002609!1.75e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,8.00e-53,23;CL:0000337,8.00e-53,23;CL:0000540,1.39e-35,33;CL:0000047,1.39e-35,33;CL:0000031,1.39e-35,33;CL:0000404,1.39e-35,33;CL:0000393,1.77e-29,39;CL:0000211,1.77e-29,39;CL:0002319,2.37e-26,43;CL:0000221,1.17e-25,44;CL:0000133,1.17e-25,44;CL:0002321,1.39e-14,70;CL:0002608,4.25e-11,3;CL:0002613,5.32e-11,3;CL:0000120,9.64e-11,3;CL:0002612,2.68e-10,3;CL:0000723,2.98e-10,91;CL:0000048,2.98e-10,91;CL:0002614,4.42e-10,3;CL:0000034,2.33e-09,97;CL:0002609,3.71e-09,6;CL:0002611,6.53e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.84e-31!52;UBERON:0005068!3.84e-31!52;UBERON:0006241!3.84e-31!52;UBERON:0007135!3.84e-31!52;UBERON:0002616!3.26e-28!49;UBERON:0001017!6.14e-28!73;UBERON:0005743!6.14e-28!73;UBERON:0000955!2.32e-27!50;UBERON:0006238!2.32e-27!50;UBERON:0003080!2.81e-27!40;UBERON:0000073!9.90e-27!75;UBERON:0001016!9.90e-27!75;UBERON:0002780!1.85e-26!39;UBERON:0001890!1.85e-26!39;UBERON:0006240!1.85e-26!39;UBERON:0003056!9.24e-26!49;UBERON:0002020!1.03e-25!34;UBERON:0000033!7.37e-24!63;UBERON:0002346!1.42e-23!71;UBERON:0003075!1.42e-23!71;UBERON:0007284!1.42e-23!71;UBERON:0002791!2.75e-20!29;UBERON:0003528!2.75e-20!29;UBERON:0001893!2.75e-20!29;UBERON:0004121!5.79e-19!102;UBERON:0000924!5.79e-19!102;UBERON:0006601!5.79e-19!102;UBERON:0007811!1.38e-13!86;UBERON:0000956!6.35e-12!21;UBERON:0001869!6.35e-12!21;UBERON:0000203!6.35e-12!21;UBERON:0000153!2.85e-11!94;UBERON:0000025!6.91e-11!114;UBERON:0002420!3.74e-10!8;UBERON:0007245!3.74e-10!8;UBERON:0010009!3.74e-10!8;UBERON:0010011!3.74e-10!8;UBERON:0000454!3.74e-10!8;UBERON:0004111!3.20e-09!122;UBERON:0002619!8.51e-09!17;UBERON:0002240!5.03e-07!6;UBERON:0005174!5.03e-07!6;UBERON:0001137!5.03e-07!6;UBERON:0001894!5.22e-07!10;UBERON:0006222!5.22e-07!10;UBERON:0000369!5.37e-07!5;UBERON:0002435!5.37e-07!5;UBERON:0000204!5.37e-07!5;UBERON:0010082!5.37e-07!5;UBERON:0001948!9.15e-07!5;UBERON:0002315!9.15e-07!5;UBERON:0002298!9.71e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.51e-33,34;UBERON:0000073,1.23e-31,54;UBERON:0001017,3.54e-29,73;UBERON:0001016,2.86e-28,75;UBERON:0001049,1.65e-27,52;UBERON:0005068,1.65e-27,52;UBERON:0006241,1.65e-27,52;UBERON:0007135,1.65e-27,52;UBERON:0002780,2.24e-22,39;UBERON:0001890,2.24e-22,39;UBERON:0006240,2.24e-22,39;UBERON:0003528,8.02e-22,29;UBERON:0002791,8.02e-22,29;UBERON:0001893,8.02e-22,29;UBERON:0003080,1.00e-21,40;UBERON:0002346,1.67e-21,64;UBERON:0003075,1.67e-21,64;UBERON:0007284,1.67e-21,64;UBERON:0004121,2.76e-21,95;UBERON:0000924,2.76e-21,95;UBERON:0006601,2.76e-21,95;UBERON:0002420,1.76e-19,8;UBERON:0007245,1.76e-19,8;UBERON:0010009,1.76e-19,8;UBERON:0010011,1.76e-19,8;UBERON:0000454,1.76e-19,8;UBERON:0002616,2.10e-18,46;UBERON:0010371,2.71e-18,73;UBERON:0000955,6.20e-18,47;UBERON:0006238,6.20e-18,47;UBERON:0003056,4.75e-17,49;UBERON:0001948,1.41e-15,5;UBERON:0002315,1.41e-15,5;UBERON:0010314,5.36e-15,92;UBERON:0002240,6.11e-13,6;UBERON:0005174,6.11e-13,6;UBERON:0001137,6.11e-13,6;UBERON:0000025,3.45e-11,114;UBERON:0000369,3.67e-11,5;UBERON:0002435,3.67e-11,5;UBERON:0000204,3.67e-11,5;UBERON:0010082,3.67e-11,5;UBERON:0002257,2.68e-10,3;UBERON:0004111,3.83e-10,122;UBERON:0002038,4.42e-10,3;UBERON:0009663,4.42e-10,3;UBERON:0009661,4.42e-10,3;UBERON:0000125,4.42e-10,3;UBERON:0002308,4.42e-10,3;UBERON:0000956,2.51e-08,21;UBERON:0001869,2.51e-08,21;UBERON:0000203,2.51e-08,21;UBERON:0002619,3.55e-08,17;UBERON:0011216,8.33e-08,194;UBERON:0002950,1.15e-07,4;UBERON:0001891,1.15e-07,4;UBERON:0009616,1.15e-07,4;UBERON:0010286,1.15e-07,4;UBERON:0002256,6.53e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47412674750713,13.2247744818008,5.07065122804943,0,0,0,0,0,0,0.384218305321555,0.622137673850866,1.89008313664367,0.630974884054146,1.42825492201902,2.20868540951614,11.1466627285608,14.2809751817172,10.1114066527102,2.20231761998777,0.893811366596314,2.15049146558741,7.38563211289086,14.6380229763855,8.85552729946492,3.62937898701795,2.8138130501584,2.29197371665215,4.12480019663135,2.42031857358475,6.15118171223492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0.915001205637253,5.27748278874031,0.695297280769106,0.255715457330331,1.0389402227978,1.29793010454206,0,0,0,0,0,0,0.540186389416048,0,0.136072998302656,0.896796041993948,0.562210347358373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.820837320395476,0.405344047729279,0.292399974850665,1.3173006917463,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.643011105094777,0.532020700926821,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,0.515559547031063,0.685082519770642,0.755393897389701,0,0,1.35942722695261,1.03552062350364,0.103787347584177,0,0.341467211508268,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.192075457214608,0.287177344778066,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.0846146078916765,0.73171189149109,0,0.950628796921032,0,0.355905054372522,0.29551344712669,0,0.77468420592983,0,0.999242311751784,0.467863216890817,0,0,0,0|short_description=p@chr14:55593026..55593064,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:55593026..55593064,- | |||
|id=chr14:55593026..55593064,- | |||
|ontology_enrichment_celltype=CL:0000117!4.52e-26!23;CL:0000337!4.52e-26!23;CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000393!8.56e-12!39;CL:0000211!8.56e-12!39;CL:0002319!6.76e-11!43;CL:0000221!1.84e-10!44;CL:0000133!1.84e-10!44;CL:0000055!2.95e-08!50;CL:0002609!1.75e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.00e-53,23;CL:0000337,8.00e-53,23;CL:0000540,1.39e-35,33;CL:0000047,1.39e-35,33;CL:0000031,1.39e-35,33;CL:0000404,1.39e-35,33;CL:0000393,1.77e-29,39;CL:0000211,1.77e-29,39;CL:0002319,2.37e-26,43;CL:0000221,1.17e-25,44;CL:0000133,1.17e-25,44;CL:0002321,1.39e-14,70;CL:0002608,4.25e-11,3;CL:0002613,5.32e-11,3;CL:0000120,9.64e-11,3;CL:0002612,2.68e-10,3;CL:0000723,2.98e-10,91;CL:0000048,2.98e-10,91;CL:0002614,4.42e-10,3;CL:0000034,2.33e-09,97;CL:0002609,3.71e-09,6;CL:0002611,6.53e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.84e-31!52;UBERON:0005068!3.84e-31!52;UBERON:0006241!3.84e-31!52;UBERON:0007135!3.84e-31!52;UBERON:0002616!3.26e-28!49;UBERON:0001017!6.14e-28!73;UBERON:0005743!6.14e-28!73;UBERON:0000955!2.32e-27!50;UBERON:0006238!2.32e-27!50;UBERON:0003080!2.81e-27!40;UBERON:0000073!9.90e-27!75;UBERON:0001016!9.90e-27!75;UBERON:0002780!1.85e-26!39;UBERON:0001890!1.85e-26!39;UBERON:0006240!1.85e-26!39;UBERON:0003056!9.24e-26!49;UBERON:0002020!1.03e-25!34;UBERON:0000033!7.37e-24!63;UBERON:0002346!1.42e-23!71;UBERON:0003075!1.42e-23!71;UBERON:0007284!1.42e-23!71;UBERON:0002791!2.75e-20!29;UBERON:0003528!2.75e-20!29;UBERON:0001893!2.75e-20!29;UBERON:0004121!5.79e-19!102;UBERON:0000924!5.79e-19!102;UBERON:0006601!5.79e-19!102;UBERON:0007811!1.38e-13!86;UBERON:0000956!6.35e-12!21;UBERON:0001869!6.35e-12!21;UBERON:0000203!6.35e-12!21;UBERON:0000153!2.85e-11!94;UBERON:0000025!6.91e-11!114;UBERON:0002420!3.74e-10!8;UBERON:0007245!3.74e-10!8;UBERON:0010009!3.74e-10!8;UBERON:0010011!3.74e-10!8;UBERON:0000454!3.74e-10!8;UBERON:0004111!3.20e-09!122;UBERON:0002619!8.51e-09!17;UBERON:0002240!5.03e-07!6;UBERON:0005174!5.03e-07!6;UBERON:0001137!5.03e-07!6;UBERON:0001894!5.22e-07!10;UBERON:0006222!5.22e-07!10;UBERON:0000369!5.37e-07!5;UBERON:0002435!5.37e-07!5;UBERON:0000204!5.37e-07!5;UBERON:0010082!5.37e-07!5;UBERON:0001948!9.15e-07!5;UBERON:0002315!9.15e-07!5;UBERON:0002298!9.71e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.51e-33,34;UBERON:0000073,1.23e-31,54;UBERON:0001017,3.54e-29,73;UBERON:0001016,2.86e-28,75;UBERON:0001049,1.65e-27,52;UBERON:0005068,1.65e-27,52;UBERON:0006241,1.65e-27,52;UBERON:0007135,1.65e-27,52;UBERON:0002780,2.24e-22,39;UBERON:0001890,2.24e-22,39;UBERON:0006240,2.24e-22,39;UBERON:0003528,8.02e-22,29;UBERON:0002791,8.02e-22,29;UBERON:0001893,8.02e-22,29;UBERON:0003080,1.00e-21,40;UBERON:0002346,1.67e-21,64;UBERON:0003075,1.67e-21,64;UBERON:0007284,1.67e-21,64;UBERON:0004121,2.76e-21,95;UBERON:0000924,2.76e-21,95;UBERON:0006601,2.76e-21,95;UBERON:0002420,1.76e-19,8;UBERON:0007245,1.76e-19,8;UBERON:0010009,1.76e-19,8;UBERON:0010011,1.76e-19,8;UBERON:0000454,1.76e-19,8;UBERON:0002616,2.10e-18,46;UBERON:0010371,2.71e-18,73;UBERON:0000955,6.20e-18,47;UBERON:0006238,6.20e-18,47;UBERON:0003056,4.75e-17,49;UBERON:0001948,1.41e-15,5;UBERON:0002315,1.41e-15,5;UBERON:0010314,5.36e-15,92;UBERON:0002240,6.11e-13,6;UBERON:0005174,6.11e-13,6;UBERON:0001137,6.11e-13,6;UBERON:0000025,3.45e-11,114;UBERON:0000369,3.67e-11,5;UBERON:0002435,3.67e-11,5;UBERON:0000204,3.67e-11,5;UBERON:0010082,3.67e-11,5;UBERON:0002257,2.68e-10,3;UBERON:0004111,3.83e-10,122;UBERON:0002038,4.42e-10,3;UBERON:0009663,4.42e-10,3;UBERON:0009661,4.42e-10,3;UBERON:0000125,4.42e-10,3;UBERON:0002308,4.42e-10,3;UBERON:0000956,2.51e-08,21;UBERON:0001869,2.51e-08,21;UBERON:0000203,2.51e-08,21;UBERON:0002619,3.55e-08,17;UBERON:0011216,8.33e-08,194;UBERON:0002950,1.15e-07,4;UBERON:0001891,1.15e-07,4;UBERON:0009616,1.15e-07,4;UBERON:0010286,1.15e-07,4;UBERON:0002256,6.53e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47412674750713,13.2247744818008,5.07065122804943,0,0,0,0,0,0,0.384218305321555,0.622137673850866,1.89008313664367,0.630974884054146,1.42825492201902,2.20868540951614,11.1466627285608,14.2809751817172,10.1114066527102,2.20231761998777,0.893811366596314,2.15049146558741,7.38563211289086,14.6380229763855,8.85552729946492,3.62937898701795,2.8138130501584,2.29197371665215,4.12480019663135,2.42031857358475,6.15118171223492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0.915001205637253,5.27748278874031,0.695297280769106,0.255715457330331,1.0389402227978,1.29793010454206,0,0,0,0,0,0,0.540186389416048,0,0.136072998302656,0.896796041993948,0.562210347358373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.820837320395476,0.405344047729279,0.292399974850665,1.3173006917463,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.643011105094777,0.532020700926821,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,0.515559547031063,0.685082519770642,0.755393897389701,0,0,1.35942722695261,1.03552062350364,0.103787347584177,0,0.341467211508268,0.486213434136588,0.419226325255965,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.192075457214608,0.287177344778066,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.0846146078916765,0.73171189149109,0,0.950628796921032,0,0.355905054372522,0.29551344712669,0,0.77468420592983,0,0.999242311751784,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr14:55593026..55593064,- | |||
}} |
Revision as of 02:29, 13 September 2013
Short description: | p@chr14:55593026..55593064, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:55593026..55593064, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.00e-53 | 23 |
neuroblast (sensu Vertebrata) | 8.00e-53 | 23 |
neuron | 1.39e-35 | 33 |
neuronal stem cell | 1.39e-35 | 33 |
neuroblast | 1.39e-35 | 33 |
electrically signaling cell | 1.39e-35 | 33 |
electrically responsive cell | 1.77e-29 | 39 |
electrically active cell | 1.77e-29 | 39 |
neural cell | 2.37e-26 | 43 |
ectodermal cell | 1.17e-25 | 44 |
neurectodermal cell | 1.17e-25 | 44 |
embryonic cell | 1.39e-14 | 70 |
hippocampal neuron | 4.25e-11 | 3 |
striatum neuron | 5.32e-11 | 3 |
granule cell | 9.64e-11 | 3 |
neuron of the ventral spinal cord | 2.68e-10 | 3 |
somatic stem cell | 2.98e-10 | 91 |
multi fate stem cell | 2.98e-10 | 91 |
neuron of the substantia nigra | 4.42e-10 | 3 |
stem cell | 2.33e-09 | 97 |
neuron of cerebral cortex | 3.71e-09 | 6 |
neuron of the dorsal spinal cord | 6.53e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.