FFCP PHASE1:Hg19::chr16:71264580..71264638,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54768|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19368|TSSclassifier=W|UniProt=F8WD03,Q4G0P3,B4DRN4,F5H8I6,F5H6V3,F5GXK3,B4DQY4|association_with_transcript=0bp_to_ENST00000288168,ENST00000321489,ENST00000393567,ENST00000538248,ENST00000539973,ENST00000541601,ENST00000545267,NM_001198542,NM_001198543,NM_017558,uc002ezw.3,uc010vmc.1,uc010vmd.1_5end|coexpression_cluster_id=C111|description=CAGE_peak_1_at_HYDIN_5end|id=chr16:71264580..71264638,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.08e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.97e-38!86;UBERON:0000073!2.89e-38!94;UBERON:0001016!2.89e-38!94;UBERON:0001017!9.20e-36!82;UBERON:0002346!2.01e-35!90;UBERON:0001049!2.40e-35!57;UBERON:0005068!2.40e-35!57;UBERON:0006241!2.40e-35!57;UBERON:0007135!2.40e-35!57;UBERON:0003075!1.31e-34!86;UBERON:0007284!1.31e-34!86;UBERON:0002616!4.74e-31!59;UBERON:0002780!2.20e-30!41;UBERON:0001890!2.20e-30!41;UBERON:0006240!2.20e-30!41;UBERON:0003056!2.71e-29!61;UBERON:0003080!3.06e-29!42;UBERON:0000924!1.20e-28!173;UBERON:0006601!1.20e-28!173;UBERON:0000955!2.17e-28!69;UBERON:0006238!2.17e-28!69;UBERON:0004121!1.15e-27!169;UBERON:0001869!9.65e-25!32;UBERON:0007023!1.14e-24!115;UBERON:0002020!1.27e-24!34;UBERON:0003528!1.27e-24!34;UBERON:0001893!1.62e-24!34;UBERON:0002791!8.22e-24!33;UBERON:0000153!6.62e-23!129;UBERON:0007811!6.62e-23!129;UBERON:0000033!1.23e-22!123;UBERON:0000956!4.55e-19!25;UBERON:0000203!4.55e-19!25;UBERON:0002619!6.86e-18!22;UBERON:0001950!3.79e-16!20;UBERON:0000483!5.26e-12!309;UBERON:0000119!7.61e-12!312;UBERON:0000475!3.06e-11!365;UBERON:0000922!2.05e-10!612;UBERON:0000064!2.40e-10!219;UBERON:0000481!7.55e-10!347;UBERON:0000062!1.92e-09!511;UBERON:0002050!2.97e-08!605;UBERON:0005423!2.97e-08!605;UBERON:0004111!6.01e-08!241;UBERON:0000923!6.49e-08!604;UBERON:0005291!6.49e-08!604;UBERON:0006598!6.49e-08!604;UBERON:0002532!6.49e-08!604;UBERON:0000025!8.55e-08!194;UBERON:0000468!1.34e-07!659;UBERON:0003076!1.84e-07!15;UBERON:0003057!1.84e-07!15;UBERON:0000464!2.33e-07!104;UBERON:0001871!2.36e-07!7;UBERON:0001894!2.66e-07!7;UBERON:0006222!2.66e-07!7;UBERON:0002308!5.33e-07!9;UBERON:0000125!5.33e-07!9;UBERON:0002420!5.55e-07!9;UBERON:0007245!5.55e-07!9;UBERON:0010009!5.55e-07!9;UBERON:0010011!5.55e-07!9;UBERON:0000454!5.55e-07!9;UBERON:0002553!8.94e-07!70|ontology_enrichment_uberon_v019=UBERON:0002780;1.65e-32;41!UBERON:0001890;1.65e-32;41!UBERON:0001869;4.11e-32;32!UBERON:0003528;1.76e-31;34!UBERON:0002020;1.76e-31;34!UBERON:0001893;3.70e-31;34!UBERON:0002791;3.20e-30;32!UBERON:0000956;6.91e-27;25!UBERON:0000203;6.91e-27;25!UBERON:0002619;1.19e-26;22!UBERON:0000073;4.26e-26;53!UBERON:0002616;4.26e-26;53!UBERON:0001950;6.08e-24;20!UBERON:0001017;3.73e-16;75!UBERON:0000955;6.37e-16;68!UBERON:0001016;2.47e-14;83!UBERON:0001894;1.74e-10;7!UBERON:0000125;2.87e-10;9!UBERON:0002308;2.87e-10;9!UBERON:0002420;3.11e-10;9!UBERON:0007245;3.11e-10;9!UBERON:0010009;3.11e-10;9!UBERON:0010011;3.11e-10;9!UBERON:0000454;3.11e-10;9!UBERON:0002298;9.92e-10;6!UBERON:0001871;1.57e-09;6!UBERON:0007023;1.73e-09;114!UBERON:0000349;2.36e-08;5!UBERON:0009663;1.13e-07;7!UBERON:0000200;1.22e-07;6!UBERON:0000369;2.32e-07;4!UBERON:0002435;2.32e-07;4!UBERON:0000204;2.32e-07;4!UBERON:0001872;4.27e-07;5!UBERON:0003296;7.93e-07;4!UBERON:0010133;7.93e-07;4!UBERON:0000922;8.33e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.31e-48,56;UBERON:0005068,2.31e-48,56;UBERON:0006241,2.31e-48,56;UBERON:0007135,2.31e-48,56;UBERON:0000073,2.16e-45,53;UBERON:0002616,2.16e-45,53;UBERON:0002780,9.45e-45,41;UBERON:0001890,9.45e-45,41;UBERON:0003080,9.45e-45,41;UBERON:0006240,9.45e-45,41;UBERON:0001017,1.35e-41,81;UBERON:0001016,1.82e-40,89;UBERON:0002346,3.84e-38,86;UBERON:0003075,6.21e-38,82;UBERON:0007284,6.21e-38,82;UBERON:0003056,5.58e-37,61;UBERON:0003528,7.63e-36,34;UBERON:0002020,7.63e-36,34;UBERON:0001893,1.10e-35,34;UBERON:0001869,1.28e-35,32;UBERON:0000955,9.38e-35,68;UBERON:0006238,9.38e-35,68;UBERON:0002791,3.76e-33,32;UBERON:0007023,9.18e-31,114;UBERON:0010371,2.39e-28,104;UBERON:0000956,7.16e-27,25;UBERON:0000203,7.16e-27,25;UBERON:0002619,8.36e-27,22;UBERON:0001950,4.19e-24,20;UBERON:0010314,7.20e-23,132;UBERON:0004121,3.10e-22,171;UBERON:0000924,3.10e-22,171;UBERON:0006601,3.10e-22,171;UBERON:0011216,1.46e-14,223;UBERON:0000025,1.05e-11,192;UBERON:0001894,1.95e-10,7;UBERON:0006222,1.95e-10,7;UBERON:0000125,2.56e-10,9;UBERON:0002308,2.56e-10,9;UBERON:0002420,2.73e-10,9;UBERON:0007245,2.73e-10,9;UBERON:0010009,2.73e-10,9;UBERON:0010011,2.73e-10,9;UBERON:0000454,2.73e-10,9;UBERON:0002298,1.02e-09,6;UBERON:0001871,1.63e-09,6;UBERON:0000349,2.36e-08,5;UBERON:0004111,6.16e-08,240;UBERON:0009663,1.02e-07,7;UBERON:0000200,1.02e-07,6;UBERON:0000483,2.22e-07,306;UBERON:0000369,2.25e-07,4;UBERON:0002435,2.25e-07,4;UBERON:0000204,2.25e-07,4;UBERON:0010082,2.25e-07,4;UBERON:0000119,3.89e-07,309;UBERON:0001872,4.68e-07,5;UBERON:0003296,8.56e-07,4;UBERON:0010133,8.56e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.0036519099174,0.410623275218653,1.00434111675842,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.13441780596881,0.665188192387692,1.31752178539689,19.3194136359126,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,1.14721838155602,1.46368447355514,1.19276791489337,0.813357600086629,1.7622379352613,1.26160425437814,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.439001141634502,0,0,0.185176890317059,0,0,1.44331342025273,0.927443239800615,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30323011489202,2.60279707715243,2.31986643833309,1.67516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,3.00759705454927,0.0920809889358963,0,0,0,0,1.07821471946181,0,0,1.26661954671451,0,0,0.215915916102139,0,0,0,2.29388645740534,0.831076008928724,0.223874754722178,0,0,1.28225062558195,2.95213181129735,3.25378394664303,4.84292754744295,0,0,1.72279661398852,0,1.6068392984416,0.193341436584244,0,0,0,0.107420244868274,0.435050081742686,0.255679882248303,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,5.01363417949149,0.296964680832639,3.99308912729002,9.94147647766298,10.8315450636095,0,0,27.2351776485112,9.36465544780028,0.276283915531148,8.31378067919111,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,2.50473865036998,9.98068990005971,0,0.174919999992391,0,2.16207551742449,0,0,0,0,3.12524990879926,28.3437243460429,23.1545162160783,0,0.552896299656123,0.591095237907095,6.80094731177315,0.10893846351899,0,1.53900517007594,0,0.46112780877612,0,0.54323685961004,1.91400695839152,0,0,0,0,0,0,0,0,0,0,1.89898258075224,19.5879369790977,0.141353071433941,0,0,0,0,0,0,0,20.4899444261258,0.802577647298789,7.26219781748551,0,11.9355417548575,0,7.49710365413842,2.41981432097328,10.4064738954367,0.63186579628488,1.35291077473043,0,5.31723098165748,2.97892760287949,6.90652420495896,3.58417289318877,7.6844577428044,0,0.694238953340524,0,0,29.7035336011451,0,0,0,0,0,0.441280633457501,4.97157629717171,0,0.397429223405979,5.6346608400732,0.586654148204409,2.64524106830061,1.49417096317547,0,28.0976313450507,0,19.9050197519879,0.14405479798815,8.32491988288398,0,0,0,0.203996435272644,0,5.4037825983881,1.50595916781192,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.157566364614447,0,0,1.18112977817699,0,10.3379859675209,13.6203406111576,1.28602518772015,0.825236619583403,0.415440338029185,0,0,7.10769812898889,0,5.43759380364467,12.0121006829146,0.316801009558219,0.717149357331379,0,0,0,0,0.542999601753713,0,0,0,0,0,0.566560457600628,0,0,12.669729723432,9.65297992721637,0.171086837884329,19.7348206248668,14.6298755217742,60.8380660735707,6.62782488555513,0,0,0,3.83004754662109,0,0,0,0.327872630709804,6.43921794625961,2.65820453990096,3.29470915235301,3.8809188519015,49.8866000250362,27.6213338326762,14.2821726765182,0,0.37494122388632,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,1.04349012362347,0.300515217994437,0,1.22061219961398,0,0.859284456339908,0,0,0,0,0,0,3.65977677773876,0.857766365499703,0,1.81364740409818,0,0,0.895444205407437,0,5.26281718988897,0,0,0,0,0,0,4.70078682915885,0,0,0,2.6208787907713,0,0.422624246717254,0,0,0,0,0.184105950251841,0,0,0,0,11.3231478136245,0.327628914576042,0,1.2754495206101,1.36329340684902,0.558644917973244,0,0,0,0,0,13.6808249455459,1.41696576325585,5.42755120794314,1.8460472781668,4.78936222821264,4.42606415770994,7.42787969906515,0,0,0,0,0,2.66967466827017,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19368 | |||
|TSSclassifier=W | |||
|UniProt=F8WD03,Q4G0P3,B4DRN4,F5H8I6,F5H6V3,F5GXK3,B4DQY4 | |||
|association_with_transcript=0bp_to_ENST00000288168,ENST00000321489,ENST00000393567,ENST00000538248,ENST00000539973,ENST00000541601,ENST00000545267,NM_001198542,NM_001198543,NM_017558,uc002ezw.3,uc010vmc.1,uc010vmd.1_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_HYDIN_5end | |||
|id=chr16:71264580..71264638,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.97e-38!86;UBERON:0000073!2.89e-38!94;UBERON:0001016!2.89e-38!94;UBERON:0001017!9.20e-36!82;UBERON:0002346!2.01e-35!90;UBERON:0001049!2.40e-35!57;UBERON:0005068!2.40e-35!57;UBERON:0006241!2.40e-35!57;UBERON:0007135!2.40e-35!57;UBERON:0003075!1.31e-34!86;UBERON:0007284!1.31e-34!86;UBERON:0002616!4.74e-31!59;UBERON:0002780!2.20e-30!41;UBERON:0001890!2.20e-30!41;UBERON:0006240!2.20e-30!41;UBERON:0003056!2.71e-29!61;UBERON:0003080!3.06e-29!42;UBERON:0000924!1.20e-28!173;UBERON:0006601!1.20e-28!173;UBERON:0000955!2.17e-28!69;UBERON:0006238!2.17e-28!69;UBERON:0004121!1.15e-27!169;UBERON:0001869!9.65e-25!32;UBERON:0007023!1.14e-24!115;UBERON:0002020!1.27e-24!34;UBERON:0003528!1.27e-24!34;UBERON:0001893!1.62e-24!34;UBERON:0002791!8.22e-24!33;UBERON:0000153!6.62e-23!129;UBERON:0007811!6.62e-23!129;UBERON:0000033!1.23e-22!123;UBERON:0000956!4.55e-19!25;UBERON:0000203!4.55e-19!25;UBERON:0002619!6.86e-18!22;UBERON:0001950!3.79e-16!20;UBERON:0000483!5.26e-12!309;UBERON:0000119!7.61e-12!312;UBERON:0000475!3.06e-11!365;UBERON:0000922!2.05e-10!612;UBERON:0000064!2.40e-10!219;UBERON:0000481!7.55e-10!347;UBERON:0000062!1.92e-09!511;UBERON:0002050!2.97e-08!605;UBERON:0005423!2.97e-08!605;UBERON:0004111!6.01e-08!241;UBERON:0000923!6.49e-08!604;UBERON:0005291!6.49e-08!604;UBERON:0006598!6.49e-08!604;UBERON:0002532!6.49e-08!604;UBERON:0000025!8.55e-08!194;UBERON:0000468!1.34e-07!659;UBERON:0003076!1.84e-07!15;UBERON:0003057!1.84e-07!15;UBERON:0000464!2.33e-07!104;UBERON:0001871!2.36e-07!7;UBERON:0001894!2.66e-07!7;UBERON:0006222!2.66e-07!7;UBERON:0002308!5.33e-07!9;UBERON:0000125!5.33e-07!9;UBERON:0002420!5.55e-07!9;UBERON:0007245!5.55e-07!9;UBERON:0010009!5.55e-07!9;UBERON:0010011!5.55e-07!9;UBERON:0000454!5.55e-07!9;UBERON:0002553!8.94e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.65e-32;41!UBERON:0001890;1.65e-32;41!UBERON:0001869;4.11e-32;32!UBERON:0003528;1.76e-31;34!UBERON:0002020;1.76e-31;34!UBERON:0001893;3.70e-31;34!UBERON:0002791;3.20e-30;32!UBERON:0000956;6.91e-27;25!UBERON:0000203;6.91e-27;25!UBERON:0002619;1.19e-26;22!UBERON:0000073;4.26e-26;53!UBERON:0002616;4.26e-26;53!UBERON:0001950;6.08e-24;20!UBERON:0001017;3.73e-16;75!UBERON:0000955;6.37e-16;68!UBERON:0001016;2.47e-14;83!UBERON:0001894;1.74e-10;7!UBERON:0000125;2.87e-10;9!UBERON:0002308;2.87e-10;9!UBERON:0002420;3.11e-10;9!UBERON:0007245;3.11e-10;9!UBERON:0010009;3.11e-10;9!UBERON:0010011;3.11e-10;9!UBERON:0000454;3.11e-10;9!UBERON:0002298;9.92e-10;6!UBERON:0001871;1.57e-09;6!UBERON:0007023;1.73e-09;114!UBERON:0000349;2.36e-08;5!UBERON:0009663;1.13e-07;7!UBERON:0000200;1.22e-07;6!UBERON:0000369;2.32e-07;4!UBERON:0002435;2.32e-07;4!UBERON:0000204;2.32e-07;4!UBERON:0001872;4.27e-07;5!UBERON:0003296;7.93e-07;4!UBERON:0010133;7.93e-07;4!UBERON:0000922;8.33e-07;49 | |||
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| |||
|short_description=p1@HYDIN | |||
}} |
Revision as of 11:24, 11 September 2013
Short description: | p1@HYDIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HYDIN_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000288168, ENST00000321489, ENST00000393567, ENST00000538248, ENST00000539973, ENST00000541601, ENST00000545267, NM_001198542, NM_001198543, NM_017558, uc002ezw.3, uc010vmc.1, uc010vmd.1_5end |
EntrezGene: | HYDIN |
HGNC: | 19368 |
UniProt: | F8WD03Q4G0P3B4DRN4F5H8I6F5H6V3F5GXK3B4DQY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.