FFCP PHASE1:Hg19::chr4:145567114..145567191,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=646576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000508269,NR_037595,uc003ijq.1_5end | |||
|coexpression_cluster_id=C2581 | |||
|description=CAGE_peak_1_at_LOC646576_5end | |||
|id=chr4:145567114..145567191,- | |||
|ontology_enrichment_celltype=CL:0000222!8.35e-28!119;CL:0000183!1.26e-18!59;CL:0000055!7.29e-18!180;CL:0002139!7.53e-17!24;CL:0000680!9.76e-17!57;CL:0000056!9.76e-17!57;CL:0000355!9.76e-17!57;CL:0000359!1.33e-16!32;CL:0000115!1.34e-16!35;CL:0000187!4.72e-16!54;CL:0000192!8.97e-16!42;CL:0000514!8.97e-16!42;CL:0002078!1.28e-14!44;CL:0000393!3.35e-14!60;CL:0000211!3.35e-14!60;CL:0000071!2.70e-13!18;CL:0002546!2.70e-13!18;CL:0000213!1.78e-11!57;CL:0000215!1.78e-11!57;CL:0000220!2.07e-09!246;CL:0002321!2.76e-09!248;CL:1000413!1.98e-07!9;CL:0002494!8.81e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.98e-19;24!CL:0000359;7.14e-18;32!CL:0000115;3.97e-17;36!CL:0000071;3.96e-15;18!CL:0002078;4.31e-12;45!CL:0000192;4.40e-12;43!CL:1000413;2.31e-08;9!CL:0000213;3.14e-08;58!CL:0000215;3.14e-08;58!CL:0000187;5.90e-08;55!CL:0002494;8.38e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.08e-28,121;CL:0000115,1.73e-20,36;CL:0002139,3.10e-19,24;CL:0000359,5.97e-19,32;CL:0002078,1.52e-17,45;CL:0000192,1.83e-16,43;CL:0000514,1.83e-16,43;CL:0000680,9.69e-16,58;CL:0000056,9.69e-16,58;CL:0000355,9.69e-16,58;CL:0000071,4.00e-15,18;CL:0002546,4.00e-15,18;CL:0000187,6.00e-15,55;CL:0000213,6.61e-13,58;CL:0000215,6.61e-13,58;CL:0000393,1.13e-12,61;CL:0000211,1.13e-12,61;CL:1000413,2.38e-08,9;CL:0002321,3.70e-08,250;CL:0002494,7.99e-08,16 | |||
|ontology_enrichment_development_v019=CL:0002546;3.96e-15;18!CL:0000514;4.40e-12;43!CL:0000355;2.83e-08;58!CL:0000222;6.35e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@LOC646576 | |||
}} |
Revision as of 02:37, 13 September 2013
Short description: | p1@LOC646576 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC646576_5end |
Coexpression cluster: | C2581_Renal_Endothelial_extraskeletal_Hepatic_Lymphatic_Mesenchymal_Smooth |
Association with transcript: | 0bp_to_ENST00000508269, NR_037595, uc003ijq.1_5end |
EntrezGene: | LOC646576 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.08e-28 | 121 |
endothelial cell | 1.73e-20 | 36 |
endothelial cell of vascular tree | 3.10e-19 | 24 |
vascular associated smooth muscle cell | 5.97e-19 | 32 |
meso-epithelial cell | 1.52e-17 | 45 |
smooth muscle cell | 1.83e-16 | 43 |
smooth muscle myoblast | 1.83e-16 | 43 |
muscle precursor cell | 9.69e-16 | 58 |
myoblast | 9.69e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.69e-16 | 58 |
blood vessel endothelial cell | 4.00e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.00e-15 | 18 |
muscle cell | 6.00e-15 | 55 |
lining cell | 6.61e-13 | 58 |
barrier cell | 6.61e-13 | 58 |
electrically responsive cell | 1.13e-12 | 61 |
electrically active cell | 1.13e-12 | 61 |
endothelial cell of artery | 2.38e-08 | 9 |
embryonic cell | 3.70e-08 | 250 |
cardiocyte | 7.99e-08 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.