FFCP PHASE1:Hg19::chr9:130469295..130469308,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=286207|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27843|TSSclassifier=S|UniProt=Q5JU67|association_with_transcript=24bp_to_ENST00000373295,NM_001012502,uc004brn.1,uc010mxl.1_5end|coexpression_cluster_id=C111|description=CAGE_peak_2_at_C9orf117_5end|id=chr9:130469295..130469308,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;4.35e-17;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.88e-26!57;UBERON:0005068!2.88e-26!57;UBERON:0006241!2.88e-26!57;UBERON:0007135!2.88e-26!57;UBERON:0007023!1.70e-25!115;UBERON:0002616!8.85e-21!59;UBERON:0001017!2.53e-19!82;UBERON:0003075!2.03e-18!86;UBERON:0007284!2.03e-18!86;UBERON:0005743!3.93e-18!86;UBERON:0002780!5.54e-18!41;UBERON:0001890!5.54e-18!41;UBERON:0006240!5.54e-18!41;UBERON:0003080!1.83e-17!42;UBERON:0002346!2.61e-17!90;UBERON:0000955!1.18e-16!69;UBERON:0006238!1.18e-16!69;UBERON:0001894!5.49e-16!7;UBERON:0006222!5.49e-16!7;UBERON:0000073!8.07e-16!94;UBERON:0001016!8.07e-16!94;UBERON:0001896!3.08e-11!3;UBERON:0005290!3.08e-11!3;UBERON:0010096!3.08e-11!3;UBERON:0002020!7.53e-11!34;UBERON:0003528!7.53e-11!34;UBERON:0002298!7.83e-11!8;UBERON:0003056!8.12e-11!61;UBERON:0003076!3.34e-10!15;UBERON:0003057!3.34e-10!15;UBERON:0000025!1.22e-09!194;UBERON:0002308!1.77e-09!9;UBERON:0000125!1.77e-09!9;UBERON:0002791!2.84e-09!33;UBERON:0001893!6.09e-09!34;UBERON:0000369!2.25e-08!4;UBERON:0002435!2.25e-08!4;UBERON:0000204!2.25e-08!4;UBERON:0010082!2.25e-08!4;UBERON:0000153!2.65e-08!129;UBERON:0007811!2.65e-08!129;UBERON:0001873!3.63e-08!2;UBERON:0010122!3.63e-08!2;UBERON:0002148!4.60e-08!2;UBERON:0009662!4.60e-08!2;UBERON:0003127!6.23e-08!2;UBERON:0000341!6.23e-08!2;UBERON:0001954!6.44e-08!2;UBERON:0003022!6.44e-08!2;UBERON:0002421!6.44e-08!2;UBERON:0002600!6.44e-08!2;UBERON:0003296!7.11e-08!4;UBERON:0010133!7.11e-08!4;UBERON:0001869!7.65e-08!32;UBERON:0001897!1.72e-07!2;UBERON:0000007!1.72e-07!2;UBERON:0000033!4.00e-07!123;UBERON:0004733!4.54e-07!12;UBERON:0002028!4.54e-07!12;UBERON:0007277!4.54e-07!12;UBERON:0004111!6.25e-07!241;UBERON:0002360!6.27e-07!2;UBERON:0000094!6.27e-07!2;UBERON:0007645!6.27e-07!2;UBERON:0004121!6.97e-07!169|ontology_enrichment_uberon_v019=UBERON:0002298;7.10e-33;6!UBERON:0001896;2.25e-24;3!UBERON:0005290;2.25e-24;3!UBERON:0001873;4.35e-17;2!UBERON:0002148;6.74e-17;2!UBERON:0006331;6.74e-17;2!UBERON:0009662;6.74e-17;2!UBERON:0003127;2.03e-16;2!UBERON:0000341;2.03e-16;2!UBERON:0004733;2.15e-16;12!UBERON:0002028;2.15e-16;12!UBERON:0001954;2.37e-16;2!UBERON:0003022;2.37e-16;2!UBERON:0002421;2.37e-16;2!UBERON:0002600;2.37e-16;2!UBERON:0004732;4.02e-15;13!UBERON:0000125;1.96e-14;9!UBERON:0002308;1.96e-14;9!UBERON:0005383;1.06e-11;3!UBERON:0005382;1.06e-11;3!UBERON:0000988;1.41e-11;3!UBERON:0006947;2.32e-11;3!UBERON:0004054;2.32e-11;3!UBERON:0000073;3.31e-11;53!UBERON:0002616;3.31e-11;53!UBERON:0001301;1.96e-09;1!UBERON:0002336;3.87e-09;1!UBERON:0011215;3.87e-09;1!UBERON:0001018;3.87e-09;1!UBERON:0002473;3.87e-09;1!UBERON:0005340;3.87e-09;1!UBERON:0003544;3.87e-09;1!UBERON:0005970;3.87e-09;1!UBERON:0002316;3.87e-09;1!UBERON:0001020;3.87e-09;1!UBERON:0002437;3.87e-09;1!UBERON:0000369;5.43e-09;4!UBERON:0002435;5.43e-09;4!UBERON:0000204;5.43e-09;4!UBERON:0003528;7.17e-09;34!UBERON:0002020;7.17e-09;34!UBERON:0001000;7.26e-09;1!UBERON:0005352;7.26e-09;1!UBERON:0005904;9.74e-09;4!UBERON:0002780;1.03e-08;41!UBERON:0001890;1.03e-08;41!UBERON:0000349;4.56e-07;5!UBERON:0001017;9.11e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0002298,8.11e-33,6;UBERON:0001896,2.44e-24,3;UBERON:0005290,2.44e-24,3;UBERON:0010096,2.44e-24,3;UBERON:0001049,1.14e-20,56;UBERON:0005068,1.14e-20,56;UBERON:0006241,1.14e-20,56;UBERON:0007135,1.14e-20,56;UBERON:0007023,8.54e-19,114;UBERON:0000073,1.16e-18,53;UBERON:0002616,1.16e-18,53;UBERON:0003076,2.43e-18,15;UBERON:0003057,2.43e-18,15;UBERON:0001873,4.19e-17,2;UBERON:0010122,4.19e-17,2;UBERON:0002148,7.30e-17,2;UBERON:0006331,7.30e-17,2;UBERON:0009662,7.30e-17,2;UBERON:0003127,1.48e-16,2;UBERON:0000341,1.48e-16,2;UBERON:0001954,1.60e-16,2;UBERON:0003022,1.60e-16,2;UBERON:0002421,1.60e-16,2;UBERON:0002600,1.60e-16,2;UBERON:0004733,2.29e-16,12;UBERON:0002028,2.29e-16,12;UBERON:0007277,2.29e-16,12;UBERON:0004732,4.26e-15,13;UBERON:0000125,2.00e-14,9;UBERON:0002308,2.00e-14,9;UBERON:0000955,6.51e-14,68;UBERON:0006238,6.51e-14,68;UBERON:0001017,1.84e-13,81;UBERON:0003075,1.84e-13,82;UBERON:0007284,1.84e-13,82;UBERON:0002346,9.83e-13,86;UBERON:0001016,6.48e-12,89;UBERON:0005383,1.03e-11,3;UBERON:0005382,1.03e-11,3;UBERON:0000988,1.49e-11,3;UBERON:0006947,2.93e-11,3;UBERON:0004054,2.93e-11,3;UBERON:0003528,3.51e-10,34;UBERON:0002020,3.51e-10,34;UBERON:0010371,3.78e-10,104;UBERON:0001301,2.04e-09,1;UBERON:0002336,4.19e-09,1;UBERON:0011215,4.19e-09,1;UBERON:0001018,4.19e-09,1;UBERON:0002473,4.19e-09,1;UBERON:0005340,4.19e-09,1;UBERON:0003544,4.19e-09,1;UBERON:0005970,4.19e-09,1;UBERON:0002316,4.19e-09,1;UBERON:0001020,4.19e-09,1;UBERON:0002437,4.19e-09,1;UBERON:0000369,5.32e-09,4;UBERON:0002435,5.32e-09,4;UBERON:0000204,5.32e-09,4;UBERON:0010082,5.32e-09,4;UBERON:0001000,9.91e-09,1;UBERON:0005352,9.91e-09,1;UBERON:0005904,1.16e-08,4;UBERON:0000025,1.75e-08,192;UBERON:0002780,2.95e-08,41;UBERON:0001890,2.95e-08,41;UBERON:0003080,2.95e-08,41;UBERON:0006240,2.95e-08,41;UBERON:0001893,1.56e-07,34;UBERON:0010314,1.60e-07,132;UBERON:0000349,3.92e-07,5;UBERON:0004111,4.26e-07,240;UBERON:0011216,9.72e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,1.39473591775749,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74315524395223,6.27101480852121,0,0,0,0.658156191461918,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49384192028505,0,0.234264445725339,0,0,0,1.18375320854817,1.20990716048664,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,9.2605134168276,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,1.77064427945048,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00777164720807,5.02483886622222,0,0,2.56289790162467,2.82967749179399,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,13.7618206965617,10.8710470506115,1.30402446176905,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0.606965604236632,1.36597314810779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,1.88126918544609,0,0,0,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0.829169439458779,0.827463966895162,4.26467963801962,1.66645102024618,0,0,0,0,0,0,0,0,4.94883217209467,1.66330178273007,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p2@C9orf117}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=286207 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27843 | |||
|TSSclassifier=S | |||
|UniProt=Q5JU67 | |||
|association_with_transcript=24bp_to_ENST00000373295,NM_001012502,uc004brn.1,uc010mxl.1_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_C9orf117_5end | |||
|id=chr9:130469295..130469308,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.35e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@C9orf117 | |||
}} |
Revision as of 07:33, 14 September 2013
Short description: | p2@C9orf117 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C9orf117_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 24bp_to_ENST00000373295, NM_001012502, uc004brn.1, uc010mxl.1_5end |
EntrezGene: | C9orf117 |
HGNC: | 27843 |
UniProt: | Q5JU67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.