FFCP PHASE1:Hg19::chr14:52327350..52327371,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000555472,ENST00000556766,ENST00000557208_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_GNG2_5end | |||
|id=chr14:52327350..52327371,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.63e-41!140;CL:0000037!3.09e-36!172;CL:0000566!3.09e-36!172;CL:0002032!1.81e-33!165;CL:0000837!1.81e-33!165;CL:0000988!2.24e-33!182;CL:0002031!2.52e-32!124;CL:0002087!3.65e-31!119;CL:0002057!1.16e-24!42;CL:0000766!6.85e-21!76;CL:0000860!9.51e-21!45;CL:0000763!1.21e-17!112;CL:0000049!1.21e-17!112;CL:0000557!1.85e-17!71;CL:0000134!4.50e-17!358;CL:0000048!7.51e-17!430;CL:0000219!1.59e-16!390;CL:0000034!3.92e-16!444;CL:0002320!4.63e-16!365;CL:0000839!5.52e-16!70;CL:0000723!1.34e-15!436;CL:0000542!2.45e-15!53;CL:0000051!2.45e-15!53;CL:0002009!3.14e-15!65;CL:0000838!4.51e-15!52;CL:0002194!2.89e-14!63;CL:0000576!2.89e-14!63;CL:0000040!2.89e-14!63;CL:0000559!2.89e-14!63;CL:0000084!9.96e-11!25;CL:0000827!9.96e-11!25;CL:0000791!6.57e-10!18;CL:0000789!6.57e-10!18;CL:0002420!6.57e-10!18;CL:0002419!6.57e-10!18;CL:0000790!6.57e-10!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.57e-19;33!CL:0002057;9.57e-19;33!CL:0000473;2.83e-14;39!CL:0000234;2.83e-14;39!CL:0000576;6.11e-14;48!CL:0000766;1.74e-12;69!CL:0002087;2.49e-12;104!CL:0000084;7.25e-11;25!CL:0000791;4.27e-10;18!CL:0000789;4.27e-10;18!CL:0002419;4.27e-10;18!CL:0000738;7.59e-10;136!CL:0000542;7.69e-09;53!CL:0000988;1.03e-07;177!CL:0000763;2.96e-07;100!CL:0000094;8.07e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.93e-45,136;CL:0000037,3.00e-39,168;CL:0002032,2.26e-36,161;CL:0000837,2.26e-36,161;CL:0000988,9.12e-36,177;CL:0002031,1.64e-35,120;CL:0002087,2.44e-34,115;CL:0000860,4.37e-25,42;CL:0002057,4.37e-25,42;CL:0000766,4.46e-24,72;CL:0000473,2.98e-23,48;CL:0000234,2.98e-23,48;CL:0000557,2.30e-20,67;CL:0000763,5.86e-20,108;CL:0000049,5.86e-20,108;CL:0000839,9.95e-19,66;CL:0002009,5.25e-18,61;CL:0000134,2.22e-17,354;CL:0002194,5.79e-17,59;CL:0000576,5.79e-17,59;CL:0000040,5.79e-17,59;CL:0000559,5.79e-17,59;CL:0000219,1.11e-16,386;CL:0000048,1.44e-16,427;CL:0002320,3.68e-16,361;CL:0000034,8.31e-16,441;CL:0000542,1.67e-15,53;CL:0000051,1.67e-15,53;CL:0000723,2.20e-15,433;CL:0000838,3.11e-15,52;CL:0000084,6.76e-11,25;CL:0000827,6.76e-11,25;CL:0000791,4.62e-10,18;CL:0000789,4.62e-10,18;CL:0002420,4.62e-10,18;CL:0002419,4.62e-10,18;CL:0000790,4.62e-10,18;CL:0000094,8.29e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-18;42!CL:0000790;4.27e-10;18!CL:0000051;7.69e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-19!102;UBERON:0003061!1.02e-19!102;UBERON:0002193!4.20e-18!112;UBERON:0002384!1.50e-15!375;UBERON:0002371!3.76e-14!80;UBERON:0001474!6.12e-13!86;UBERON:0004765!9.02e-11!101;UBERON:0001434!9.02e-11!101;UBERON:0007023!6.48e-10!115;UBERON:0002405!1.78e-09!115;UBERON:0002619!6.20e-09!22;UBERON:0001017!1.50e-08!82;UBERON:0001049!2.63e-08!57;UBERON:0005068!2.63e-08!57;UBERON:0006241!2.63e-08!57;UBERON:0007135!2.63e-08!57;UBERON:0001950!3.92e-08!20;UBERON:0000956!1.35e-07!25;UBERON:0000203!1.35e-07!25;UBERON:0001869!1.38e-07!32;UBERON:0002020!1.40e-07!34;UBERON:0003528!1.40e-07!34;UBERON:0005743!1.54e-07!86;UBERON:0002204!1.78e-07!167;UBERON:0001893!2.04e-07!34;UBERON:0002791!3.72e-07!33;UBERON:0003080!4.00e-07!42;UBERON:0002780!6.14e-07!41;UBERON:0001890!6.14e-07!41;UBERON:0006240!6.14e-07!41;UBERON:0000073!9.22e-07!94;UBERON:0001016!9.22e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.50e-09;22!UBERON:0001950;2.95e-08;20!UBERON:0000956;1.07e-07;25!UBERON:0000203;1.07e-07;25!UBERON:0001869;5.40e-07;32!UBERON:0003528;8.63e-07;34!UBERON:0002020;8.63e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.54e-22,98;UBERON:0003061,2.54e-22,98;UBERON:0002193,4.31e-20,108;UBERON:0002371,1.99e-16,76;UBERON:0002405,5.66e-16,93;UBERON:0002384,1.42e-15,371;UBERON:0001474,7.04e-15,82;UBERON:0004765,3.10e-12,90;UBERON:0001434,2.81e-11,100;UBERON:0007023,9.31e-10,114;UBERON:0002619,4.53e-09,22;UBERON:0001950,2.96e-08,20;UBERON:0001049,3.06e-08,56;UBERON:0005068,3.06e-08,56;UBERON:0006241,3.06e-08,56;UBERON:0007135,3.06e-08,56;UBERON:0001017,3.23e-08,81;UBERON:0000073,9.78e-08,53;UBERON:0002616,9.78e-08,53;UBERON:0000956,1.04e-07,25;UBERON:0000203,1.04e-07,25;UBERON:0001869,1.06e-07,32;UBERON:0003528,1.09e-07,34;UBERON:0002020,1.09e-07,34;UBERON:0002204,1.48e-07,167;UBERON:0001893,1.59e-07,34;UBERON:0001016,2.65e-07,89;UBERON:0002791,2.89e-07,32;UBERON:0002780,4.88e-07,41;UBERON:0001890,4.88e-07,41;UBERON:0003080,4.88e-07,41;UBERON:0006240,4.88e-07,41 | |||
|phase1_expression=3.81524596468169,10.7050261945492,3.38290569830331,4.00293193412522,5.36353313312745,0.872338524100369,0,0.631719873426831,7.05201196139564,7.86348596804828,3.48900583986214,0,0.263766978228454,3.21792517696121,2.31978163009541,7.39557661096953,7.8350288643117,4.38186054232424,6.8310591830671,11.8196215753716,5.30401797235058,5.32873026512749,2.86235987131057,2.18999080116615,1.50651167513763,14.9770275265984,15.0244078693401,16.2931317319316,122.336290100009,138.562412713094,58.2108623668446,0,0,0,0.232401601740905,4.83375390457233,11.450417134059,88.0852699565685,145.996357758263,129.989511558795,10.5240272892764,5.83008598834163,11.3333249759042,86.9481467901797,89.9344745979366,102.370473821258,131.787263925523,105.670147221609,117.998127311034,115.07695692886,102.46428261164,107.362932369418,141.69047478275,95.5317331704063,102.9241298117,84.1443257755443,74.5033789657919,81.1251778846756,145.389848876179,126.766965695057,149.604887436976,98.2956874556414,85.9688364349233,95.4743441193235,274.247730504012,267.238440829527,293.972101525911,81.4045675431848,77.70095484461,80.7942502303034,190.095443826878,240.117018663892,250.005286078299,45.8423971296914,30.8276234949313,52.6243200226023,19.3205245571972,15.9187506411997,53.8430715435218,39.9017841237748,52.1161694261616,89.1401070371414,17.5996244461323,17.4764355603882,17.7901850772711,21.7632413508919,17.2170274425485,23.5648500381338,22.4755256746853,16.2189138271012,68.8747692622433,107.464405654882,85.6292031000513,10.5737062863221,110.980695470344,8.42829071280246,75.5365517237119,113.973121197258,113.492027447729,63.5308682484577,43.6735837289011,26.5130771211451,40.9136129656614,48.797780115706,58.3319696800178,50.0666601758984,66.6177504861938,53.5421716453322,46.3011277313167,53.6067569007984,55.2700035571697,55.6421924611301,66.284093733441,56.1835738988397,68.9934457112847,49.2895640734413,61.6984994699093,49.4823521494987,98.9306995796256,34.0864993326784,24.0900877926875,32.3153695112447,37.4932046503654,46.203166626745,46.224368824368,40.0153555954388,41.8775278429734,89.3117872485565,157.254835120702,113.687157047997,2.43806866313962,18.7796240717018,10.4847300711695,1.80719576192283,0,1.73815822752988,2.3858578411533,2.43317435151318,3.87592750372678,3.76939975686359,3.86473057049755,8.90657713384446,0,0,0.649094787309367,1.0447784237956,0.531831842075461,21.7026468117861,15.4438625910635,18.9443325678078,0,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,1.55050055501597,1.42306505074684,2.34304428935269,3.62546385398232,2.28081631715554,6.34561349625241,0.367663080345869,0,0,0,0.337834441449967,1.53316637465883,0,0.366403487860815,358.442735426092,566.159185656555,0,0.496971951695318,1.2663051166458,0.926864265692532,0.573673241497627,2.12801029319014,10.0921968025615,6.4049397437823,1.97334038733728,6.84664277879486,4.31074150623002,4.7403951902903,3.32986340818849,1.72852777344,6.56100009134631,2.49728061464256,2.85235910772225,1.64393548606981,5.63685593490071,5.01806127541208,7.16299114181467,1.63323337003915,5.89604723096486,2.9964476540972,2.37600571456411,2.96720315134268,13.6524204290704,5.74894513452991,4.71341119071385,7.25687415257392,2.49357703935765,15.3642167308293,2.75839016219118,3.60571341375832,4.76415169272088,6.81680615617675,2.13557388818567,1.48352330811693,9.90300617078528,5.46178404963726,4.3798891807757,4.46680455195816,21.6033705268821,53.1031678128533,12.8741224864498,4.32634523618807,8.72888706821584,26.2707098462295,42.4166333538366,4.40857540007268,0.193260853163297,1.09098448236334,0,0.853815942907168,1.06023814657188,4.18298194330266,7.87824018116815,4.03713361401005,0.36497735907583,3.12899064659632,0.643240938192885,4.14404764057442,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0.269662616320329,0,0,1.4763109092493,4.20725321410337,5.3504621473082,5.88034845542168,1.26755034821831,0.982827216677626,1.18157981336281,20.7487656724886,0.122988438543114,7.20584803253807,0,0,0,0.833296006426766,1.3032332212413,6.23960871167747,4.3299402607582,2.55046890945169,3.52226082707465,1.29929802984966,0.462985512576611,0.951270761172991,0,0,6.15542515218493,0.234004265139238,1.78357394746474,1.87467667973554,2.68771405118175,0.567100388969546,0.53735113621709,0,0,126.614452139257,25.0057552597562,40.2216544149098,49.7213839288517,36.7365481270766,4.95283575478919,2.29193055334967,4.68869788840188,3.4214489204541,10.2827492703324,6.60754727256618,15.4346273620512,4.03671903643299,13.5147621338317,3.9602674343313,11.3759109866844,0,6.762422020448,1.06375246633948,2.08014873822732,0.771622122786426,2.83698264046557,2.66422179016099,1.85871391755592,1.62786481617433,3.29296134712308,4.23457039581856,1.06617584622764,7.91951872933429,3.01439377059586,2.61460037580088,0.799783929456456,23.1085183218262,23.6060832973099,6.32501818449095,0.958499421966331,0,14.2636905040718,1.88215698667853,2.67119219315498,8.0577433457953,75.0970464756633,107.184733549848,166.895742941266,152.343184064061,40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| |||
|short_description=p2@GNG2 | |||
}} |
Revision as of 20:05, 11 January 2014
Short description: | p2@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNG2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000555472, ENST00000556766, ENST00000557208_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.54e-22 | 98 |
blood island | 2.54e-22 | 98 |
hemolymphoid system | 4.31e-20 | 108 |
bone marrow | 1.99e-16 | 76 |
immune system | 5.66e-16 | 93 |
connective tissue | 1.42e-15 | 371 |
bone element | 7.04e-15 | 82 |
skeletal element | 3.10e-12 | 90 |
skeletal system | 2.81e-11 | 100 |
adult organism | 9.31e-10 | 114 |
regional part of cerebral cortex | 4.53e-09 | 22 |
neocortex | 2.96e-08 | 20 |
neural tube | 3.06e-08 | 56 |
neural rod | 3.06e-08 | 56 |
future spinal cord | 3.06e-08 | 56 |
neural keel | 3.06e-08 | 56 |
central nervous system | 3.23e-08 | 81 |
regional part of nervous system | 9.78e-08 | 53 |
regional part of brain | 9.78e-08 | 53 |
cerebral cortex | 1.04e-07 | 25 |
pallium | 1.04e-07 | 25 |
cerebral hemisphere | 1.06e-07 | 32 |
brain grey matter | 1.09e-07 | 34 |
gray matter | 1.09e-07 | 34 |
musculoskeletal system | 1.48e-07 | 167 |
telencephalon | 1.59e-07 | 34 |
nervous system | 2.65e-07 | 89 |
regional part of telencephalon | 2.89e-07 | 32 |
regional part of forebrain | 4.88e-07 | 41 |
forebrain | 4.88e-07 | 41 |
anterior neural tube | 4.88e-07 | 41 |
future forebrain | 4.88e-07 | 41 |