FFCP PHASE1:Hg19::chr15:52030293..52030341,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28571 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV50 | |||
|association_with_transcript=0bp_to_ENST00000267838,ENST00000560491,NM_153374,uc002abi.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_LYSMD2_5end | |||
|id=chr15:52030293..52030341,- | |||
|ontology_enrichment_celltype=CL:0000738!6.47e-23!140;CL:0002087!4.34e-20!119;CL:0002031!4.42e-18!124;CL:0000037!1.75e-17!172;CL:0000566!1.75e-17!172;CL:0000988!3.65e-17!182;CL:0002032!1.40e-15!165;CL:0000837!1.40e-15!165;CL:0000838!5.38e-12!52;CL:0000542!1.90e-11!53;CL:0000051!1.90e-11!53;CL:0000766!4.03e-10!76;CL:0000860!8.43e-10!45;CL:0002057!9.52e-10!42;CL:0002194!2.03e-08!63;CL:0000576!2.03e-08!63;CL:0000040!2.03e-08!63;CL:0000559!2.03e-08!63;CL:0002009!3.52e-08!65;CL:0000839!1.31e-07!70;CL:0000791!2.34e-07!18;CL:0000789!2.34e-07!18;CL:0002420!2.34e-07!18;CL:0002419!2.34e-07!18;CL:0000790!2.34e-07!18;CL:0000557!4.18e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002087;5.91e-09;104!CL:0000576;3.34e-08;48!CL:0000791;6.92e-08;18!CL:0000789;6.92e-08;18!CL:0002419;6.92e-08;18!CL:0000542;1.35e-07;53!CL:0000084;2.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.04e-26,136;CL:0002087,5.18e-23,115;CL:0002031,9.58e-21,120;CL:0000037,2.80e-20,168;CL:0000988,5.74e-20,177;CL:0002032,4.05e-18,161;CL:0000837,4.05e-18,161;CL:0000838,8.98e-14,52;CL:0000542,4.05e-13,53;CL:0000051,4.05e-13,53;CL:0000766,1.30e-11,72;CL:0000860,2.09e-10,42;CL:0002057,2.09e-10,42;CL:0002194,2.07e-09,59;CL:0000576,2.07e-09,59;CL:0000040,2.07e-09,59;CL:0000559,2.07e-09,59;CL:0000473,2.48e-09,48;CL:0000234,2.48e-09,48;CL:0002009,4.56e-09,61;CL:0000839,1.57e-08,66;CL:0000557,2.99e-08,67;CL:0000791,5.65e-08,18;CL:0000789,5.65e-08,18;CL:0002420,5.65e-08,18;CL:0002419,5.65e-08,18;CL:0000790,5.65e-08,18;CL:0000084,2.54e-07,25;CL:0000827,2.54e-07,25;CL:0000763,3.69e-07,108;CL:0000049,3.69e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;6.92e-08;18!CL:0000051;1.35e-07;53!CL:0002057;2.01e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-33!115;UBERON:0001049!4.80e-27!57;UBERON:0005068!4.80e-27!57;UBERON:0006241!4.80e-27!57;UBERON:0007135!4.80e-27!57;UBERON:0002616!1.08e-21!59;UBERON:0003080!1.19e-21!42;UBERON:0001017!1.43e-21!82;UBERON:0002780!2.17e-21!41;UBERON:0001890!2.17e-21!41;UBERON:0006240!2.17e-21!41;UBERON:0005743!4.84e-21!86;UBERON:0000955!2.39e-20!69;UBERON:0006238!2.39e-20!69;UBERON:0000073!2.44e-18!94;UBERON:0001016!2.44e-18!94;UBERON:0002020!2.70e-17!34;UBERON:0003528!2.70e-17!34;UBERON:0001893!2.79e-17!34;UBERON:0001869!1.25e-16!32;UBERON:0002791!1.29e-16!33;UBERON:0003075!1.99e-15!86;UBERON:0007284!1.99e-15!86;UBERON:0002619!4.26e-14!22;UBERON:0002346!6.98e-14!90;UBERON:0001950!4.77e-13!20;UBERON:0003056!7.18e-13!61;UBERON:0000956!1.16e-12!25;UBERON:0000203!1.16e-12!25;UBERON:0002390!1.84e-10!102;UBERON:0003061!1.84e-10!102;UBERON:0000153!4.71e-10!129;UBERON:0007811!4.71e-10!129;UBERON:0002193!1.46e-09!112;UBERON:0000033!3.89e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.19e-17;41!UBERON:0001890;3.19e-17;41!UBERON:0001869;5.87e-17;32!UBERON:0003528;9.23e-17;34!UBERON:0002020;9.23e-17;34!UBERON:0001893;9.59e-17;34!UBERON:0002791;1.65e-16;32!UBERON:0000073;3.92e-16;53!UBERON:0002616;3.92e-16;53!UBERON:0002619;2.39e-15;22!UBERON:0000956;3.01e-14;25!UBERON:0000203;3.01e-14;25!UBERON:0001950;3.28e-14;20!UBERON:0000955;1.10e-10;68!UBERON:0007023;6.93e-10;114!UBERON:0001017;1.14e-09;75!UBERON:0001016;1.34e-08;83!UBERON:0000178;4.16e-07;15!UBERON:0000179;4.16e-07;15!UBERON:0000463;4.16e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.47e-35,114;UBERON:0001049,2.21e-29,56;UBERON:0005068,2.21e-29,56;UBERON:0006241,2.21e-29,56;UBERON:0007135,2.21e-29,56;UBERON:0000073,1.62e-27,53;UBERON:0002616,1.62e-27,53;UBERON:0002780,1.70e-23,41;UBERON:0001890,1.70e-23,41;UBERON:0003080,1.70e-23,41;UBERON:0006240,1.70e-23,41;UBERON:0001017,1.18e-21,81;UBERON:0000955,7.32e-21,68;UBERON:0006238,7.32e-21,68;UBERON:0001016,1.47e-19,89;UBERON:0003528,5.79e-19,34;UBERON:0002020,5.79e-19,34;UBERON:0001893,6.02e-19,34;UBERON:0001869,3.15e-18,32;UBERON:0002791,9.94e-18,32;UBERON:0002619,2.00e-15,22;UBERON:0003075,6.30e-15,82;UBERON:0007284,6.30e-15,82;UBERON:0001950,2.90e-14,20;UBERON:0000956,7.72e-14,25;UBERON:0000203,7.72e-14,25;UBERON:0002346,1.38e-13,86;UBERON:0003056,1.88e-12,61;UBERON:0002390,7.44e-12,98;UBERON:0003061,7.44e-12,98;UBERON:0002193,9.64e-11,108;UBERON:0011216,2.00e-10,223;UBERON:0010371,6.68e-10,104;UBERON:0003076,3.78e-07,15;UBERON:0003057,3.78e-07,15;UBERON:0000178,4.17e-07,15;UBERON:0000179,4.17e-07,15;UBERON:0000463,4.17e-07,15 | |||
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| |||
|short_description=p2@LYSMD2 | |||
}} |
Revision as of 23:34, 11 January 2014
Short description: | p2@LYSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LYSMD2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000267838, ENST00000560491, NM_153374, uc002abi.2_5end |
EntrezGene: | LYSMD2 |
HGNC: | 28571 |
UniProt: | Q8IV50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data