FFCP PHASE1:Hg19::chr4:145567114..145567191,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000508269,NR_037595,uc003ijq.1_5end | |||
|coexpression_cluster_id=C2581 | |||
|description=CAGE_peak_1_at_LOC646576_5end | |||
|id=chr4:145567114..145567191,- | |||
|ontology_enrichment_celltype=CL:0000222!8.35e-28!119;CL:0000183!1.26e-18!59;CL:0000055!7.29e-18!180;CL:0002139!7.53e-17!24;CL:0000680!9.76e-17!57;CL:0000056!9.76e-17!57;CL:0000355!9.76e-17!57;CL:0000359!1.33e-16!32;CL:0000115!1.34e-16!35;CL:0000187!4.72e-16!54;CL:0000192!8.97e-16!42;CL:0000514!8.97e-16!42;CL:0002078!1.28e-14!44;CL:0000393!3.35e-14!60;CL:0000211!3.35e-14!60;CL:0000071!2.70e-13!18;CL:0002546!2.70e-13!18;CL:0000213!1.78e-11!57;CL:0000215!1.78e-11!57;CL:0000220!2.07e-09!246;CL:0002321!2.76e-09!248;CL:1000413!1.98e-07!9;CL:0002494!8.81e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.98e-19;24!CL:0000359;7.14e-18;32!CL:0000115;3.97e-17;36!CL:0000071;3.96e-15;18!CL:0002078;4.31e-12;45!CL:0000192;4.40e-12;43!CL:1000413;2.31e-08;9!CL:0000213;3.14e-08;58!CL:0000215;3.14e-08;58!CL:0000187;5.90e-08;55!CL:0002494;8.38e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.08e-28,121;CL:0000115,1.73e-20,36;CL:0002139,3.10e-19,24;CL:0000359,5.97e-19,32;CL:0002078,1.52e-17,45;CL:0000192,1.83e-16,43;CL:0000514,1.83e-16,43;CL:0000680,9.69e-16,58;CL:0000056,9.69e-16,58;CL:0000355,9.69e-16,58;CL:0000071,4.00e-15,18;CL:0002546,4.00e-15,18;CL:0000187,6.00e-15,55;CL:0000213,6.61e-13,58;CL:0000215,6.61e-13,58;CL:0000393,1.13e-12,61;CL:0000211,1.13e-12,61;CL:1000413,2.38e-08,9;CL:0002321,3.70e-08,250;CL:0002494,7.99e-08,16 | |||
|ontology_enrichment_development_v019=CL:0002546;3.96e-15;18!CL:0000514;4.40e-12;43!CL:0000355;2.83e-08;58!CL:0000222;6.35e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.31e-36!79;UBERON:0007798!4.31e-36!79;UBERON:0000055!3.50e-32!69;UBERON:0000025!1.75e-30!194;UBERON:0000477!1.94e-30!286;UBERON:0000119!7.25e-30!312;UBERON:0004111!1.06e-29!241;UBERON:0001981!2.23e-29!60;UBERON:0007500!2.23e-29!60;UBERON:0004537!2.23e-29!60;UBERON:0006965!2.23e-29!60;UBERON:0000483!7.14e-29!309;UBERON:0003914!6.53e-27!118;UBERON:0004535!3.76e-26!110;UBERON:0004872!4.34e-26!84;UBERON:0001009!8.69e-25!113;UBERON:0001637!1.88e-23!42;UBERON:0003509!1.88e-23!42;UBERON:0004572!1.88e-23!42;UBERON:0000490!2.55e-20!138;UBERON:0004573!3.73e-18!33;UBERON:0004571!3.73e-18!33;UBERON:0002385!2.34e-16!63;UBERON:0001015!2.34e-16!63;UBERON:0000383!2.34e-16!63;UBERON:0000481!3.16e-16!347;UBERON:0001134!3.33e-16!61;UBERON:0002036!3.33e-16!61;UBERON:0003082!3.33e-16!61;UBERON:0004290!8.09e-15!70;UBERON:0005256!1.22e-13!143;UBERON:0000914!1.58e-13!83;UBERON:0002329!1.58e-13!83;UBERON:0003077!1.58e-13!83;UBERON:0003059!1.58e-13!83;UBERON:0007282!1.58e-13!83;UBERON:0009618!1.58e-13!83;UBERON:0007285!1.58e-13!83;UBERON:0001986!2.70e-13!18;UBERON:0004638!2.70e-13!18;UBERON:0004852!2.70e-13!18;UBERON:0000475!1.63e-12!365;UBERON:0000486!9.53e-12!82;UBERON:0000947!2.80e-11!21;UBERON:0010191!2.80e-11!21;UBERON:0006914!7.15e-11!25;UBERON:0000487!1.49e-10!22;UBERON:0000468!7.00e-10!659;UBERON:0000922!1.84e-09!612;UBERON:0002050!4.35e-09!605;UBERON:0005423!4.35e-09!605;UBERON:0000923!6.45e-09!604;UBERON:0005291!6.45e-09!604;UBERON:0006598!6.45e-09!604;UBERON:0002532!6.45e-09!604;UBERON:0000467!6.58e-09!625;UBERON:0000480!1.03e-08!626;UBERON:0002100!5.95e-08!216;UBERON:0003915!1.98e-07!9;UBERON:0004700!1.98e-07!9;UBERON:0001917!1.98e-07!9;UBERON:0003104!2.22e-07!238;UBERON:0009142!2.22e-07!238;UBERON:0003075!4.52e-07!86;UBERON:0007284!4.52e-07!86;UBERON:0002616!6.99e-07!59;UBERON:0003103!7.45e-07!69;UBERON:0000955!7.89e-07!69;UBERON:0006238!7.89e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.33e-19;42!UBERON:0003509;1.33e-19;42!UBERON:0004572;1.33e-19;42!UBERON:0007500;2.31e-19;56!UBERON:0001981;2.31e-19;56!UBERON:0004537;2.31e-19;56!UBERON:0004573;8.61e-19;33!UBERON:0004571;8.61e-19;33!UBERON:0000055;1.46e-18;65!UBERON:0002049;5.24e-17;75!UBERON:0007798;5.24e-17;75!UBERON:0003914;6.93e-16;74!UBERON:0004638;3.96e-15;18!UBERON:0001986;3.96e-15;18!UBERON:0004852;3.96e-15;18!UBERON:0000947;1.16e-12;21!UBERON:0010191;1.16e-12;21!UBERON:0006914;1.42e-12;25!UBERON:0000487;2.84e-12;22!UBERON:0000025;7.96e-10;93!UBERON:0004535;2.30e-09;109!UBERON:0000490;4.16e-09;33!UBERON:0001009;9.19e-09;112!UBERON:0003915;2.31e-08;9!UBERON:0004700;2.31e-08;9!UBERON:0001917;2.31e-08;9!UBERON:0010260;2.84e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.24e-39,78;UBERON:0007798,2.24e-39,78;UBERON:0000055,4.06e-35,68;UBERON:0000025,1.00e-32,192;UBERON:0007500,2.69e-32,59;UBERON:0001981,2.69e-32,59;UBERON:0004537,2.69e-32,59;UBERON:0006965,2.69e-32,59;UBERON:0003914,5.21e-31,117;UBERON:0004535,6.82e-31,109;UBERON:0004872,8.05e-30,83;UBERON:0004111,8.97e-30,240;UBERON:0000119,9.85e-30,309;UBERON:0001009,5.54e-29,112;UBERON:0000483,1.17e-28,306;UBERON:0001637,7.11e-27,42;UBERON:0003509,7.11e-27,42;UBERON:0004572,7.11e-27,42;UBERON:0004573,9.60e-21,33;UBERON:0004571,9.60e-21,33;UBERON:0000490,4.52e-19,148;UBERON:0007503,2.23e-17,78;UBERON:0002385,2.88e-15,64;UBERON:0001015,2.88e-15,64;UBERON:0000383,2.88e-15,64;UBERON:0004638,4.00e-15,18;UBERON:0001986,4.00e-15,18;UBERON:0004852,4.00e-15,18;UBERON:0001134,4.65e-15,62;UBERON:0002036,4.65e-15,62;UBERON:0003082,4.65e-15,62;UBERON:0007524,4.98e-14,73;UBERON:0003104,8.48e-14,160;UBERON:0009142,8.48e-14,160;UBERON:0003077,9.12e-14,72;UBERON:0007285,9.12e-14,72;UBERON:0002329,1.20e-13,71;UBERON:0003059,1.20e-13,71;UBERON:0007282,1.20e-13,71;UBERON:0004290,1.20e-13,71;UBERON:0009618,1.20e-13,71;UBERON:0006914,8.45e-13,25;UBERON:0000947,8.58e-13,21;UBERON:0010191,8.58e-13,21;UBERON:0000487,1.87e-12,22;UBERON:0005256,2.56e-11,122;UBERON:0000486,1.92e-10,83;UBERON:0010314,9.63e-09,132;UBERON:0003915,2.38e-08,9;UBERON:0004700,2.38e-08,9;UBERON:0001917,2.38e-08,9;UBERON:0005423,9.32e-08,581;UBERON:0000923,1.71e-07,560;UBERON:0010316,1.71e-07,560;UBERON:0005291,1.71e-07,560;UBERON:0006598,1.71e-07,560;UBERON:0010317,1.71e-07,560;UBERON:0002532,1.71e-07,560;UBERON:0002050,2.85e-07,564;UBERON:0010260,3.15e-07,9;UBERON:0000922,5.01e-07,592;UBERON:0003075,6.45e-07,82;UBERON:0007284,6.45e-07,82 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,1.96587149201207,2.79120467188971,0,0.527533956456907,6.80714941280256,6.95934489028623,7.39557661096953,6.62963980826375,5.84248072309899,12.1983199697627,9.84968464614303,22.0320746543793,6.26909442956176,1.71741592278634,2.05311637609326,3.01302335027527,1.29902789771517,0.985207073399349,1.33808328233255,0,0.383829398097213,0.154816123316076,0.919421224478927,2.10844143144775,0.369754010166788,0,0,3.52320527201817,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,1.32171328579026,2.24203425192614,4.74091352595139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.69490601792545,7.79961627245535,5.78302643815306,1.00267582127178,2.89693037921647,1.5905718941022,4.86634870302636,1.89069634328136,3.76939975686359,5.97276542713257,2.81605012320082,0.364295288292542,0,0,0,0,15.7403812041526,12.0118931263827,15.2297575545122,22.4601520324377,20.645630282547,35.7554716655822,27.7000891542765,28.1064622260637,25.8610959423663,20.0635167875338,12.6624211992971,9.60568909254118,22.0915604424682,28.1980521976403,22.8081631715554,44.663356531315,31.9866879900906,32.4056779152704,23.485828538713,40.4152870727106,46.6211529200954,13.7984973719295,22.7823758296351,28.7626737970739,0,0,0,11.4303548889923,17.7282716330412,1.72131935057184,8.03142538096678,14.896072052331,3.92474320099615,8.5399196583764,22.2000793575444,8.09148692039392,22.6313929077076,18.9615807611612,9.38416051398575,9.21881479167998,2.57753575017176,1.5608003841516,7.41613368007784,3.58676833324323,1.52664848236894,1.13311061057692,0.140450806702248,3.0623125688234,0.982674538494144,2.37649296704261,0,0.247266929278557,0.910161361938026,10.0606539854273,0.673344455816265,2.37725187756732,0.831192346452549,0.438977620880838,0,1.65261864797256,18.3760136719234,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0.930584281657949,0.337552664482532,1.07180705677318,0,0.0920498986422993,2.26304479546337,0.355009592516614,0.906768884048762,1.18692414617341,0,0,0,0.365921118388786,0.265059536642971,0.580969714347592,0.621966330092223,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0.196221465125346,0,28.0499072757366,9.81692416624121,3.7041661019826,7.3504355692771,0,0,4.72631925345123,0.441463099414651,0,1.71567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,0.651616610620649,3.11980435583874,7.21656710126366,0.34779121492523,14.9109041679494,33.0599165372859,29.6310728049031,24.5427856382632,0,0,0,0,0,0,0,0.141775097242386,2.50763863567975,0.290633938513962,2.68367875415648,0.492663237895943,0.528290604079356,1.86595303986695,6.19715799692934,1.2624243342638,0,0,0,1.71072446022705,0,0,0.285826432630578,6.95212722941236,3.05172048183296,4.9870034358246,4.00742318849111,0,0,1.32969058292435,5.2003718455683,12.603161338845,34.0437916855868,12.7882645927728,0.714889968290738,2.17048642156577,5.76268235746538,1.30294473717494,0,2.37585561880029,0,0.871533458600294,1.69954085009497,0,0,0,7.66799537573064,9.18895486672911,9.98458335285029,3.90909528002464,8.42452922456572,1.61154866915906,0,0,0,0.128343036279748,1.01637849688985,0,1.54657762555539,1.17261385734044,0.637938751653163,0,0,0,5.64380861908043,11.5039219843726,8.4092157346918,1.87173775377726,0,1.41932173530541,2.22568688486155,0.902838299183157,6.82222512167955,8.27784570340039,10.627609576567,10.1403042697937,0.521301686808497,13.1186775500036,8.23544217146054,0.413536052245775,0,0.106727557803444,0,0,0.907170879989041,0,0.153461973288062,0.280660094433074,0.128139149255701,1.53512174720011,0.482561763430822,2.96836132889982,4.93471020168498,4.97172830876756,5.00975651684236,14.5391240171414,5.81051892299796,0.120859449591622,0.601519410909855,0.0920809889358963,0.229628896329213,0.364182336013434,1.96686622439136,1.35359883872224,1.69433741629712,7.84349769176855,1.46139224653261,1.79437769117889,42.0813521062317,28.9159298970077,26.341741764461,81.7404439258533,17.6115184403504,13.545623894081,0.509752546090077,4.15538004464362,2.0148727924996,0,0,0.512900250232778,1.31205858279882,0.325378394664303,1.33953315142039,5.58573735391895,3.87794649626764,0,0,1.6068392984416,2.41676795730305,0.770243085573222,0.460511024178389,4.41077031950498,0.429680979473094,1.74020032697074,0.767039646744908,0.712256285173899,0.495854746082934,0.576570202095319,0.382838137483752,0.10115778085555,8.36721988735114,5.35180989612088,25.0933417257816,11.0892088863392,16.5014869398277,13.9189278732012,32.2464141240821,26.6212289340104,5.95453390975468,6.32758849437452,2.47819252100972,9.21232048720802,5.13526785640705,3.81843897511124,18.8387673647815,0.35974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| |||
|short_description=p1@LOC646576 | |||
}} |
Revision as of 03:19, 22 January 2014
Short description: | p1@LOC646576 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC646576_5end |
Coexpression cluster: | C2581_Renal_Endothelial_extraskeletal_Hepatic_Lymphatic_Mesenchymal_Smooth |
Association with transcript: | 0bp_to_ENST00000508269, NR_037595, uc003ijq.1_5end |
EntrezGene: | LOC646576 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.08e-28 | 121 |
endothelial cell | 1.73e-20 | 36 |
endothelial cell of vascular tree | 3.10e-19 | 24 |
vascular associated smooth muscle cell | 5.97e-19 | 32 |
meso-epithelial cell | 1.52e-17 | 45 |
smooth muscle cell | 1.83e-16 | 43 |
smooth muscle myoblast | 1.83e-16 | 43 |
muscle precursor cell | 9.69e-16 | 58 |
myoblast | 9.69e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.69e-16 | 58 |
blood vessel endothelial cell | 4.00e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.00e-15 | 18 |
muscle cell | 6.00e-15 | 55 |
lining cell | 6.61e-13 | 58 |
barrier cell | 6.61e-13 | 58 |
electrically responsive cell | 1.13e-12 | 61 |
electrically active cell | 1.13e-12 | 61 |
endothelial cell of artery | 2.38e-08 | 9 |
embryonic cell | 3.70e-08 | 250 |
cardiocyte | 7.99e-08 | 16 |