FFCP PHASE1:Hg19::chr6:152958039..152958065,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |||
|TSSclassifier=strong | |||
|UniProt=F5GXQ8 | |||
|association_with_transcript=-21bp_to_ENST00000367248_5end | |||
|coexpression_cluster_id=C4575 | |||
|description=CAGE_peak_6_at_SYNE1_5end | |||
|id=chr6:152958039..152958065,- | |||
|ontology_enrichment_celltype=CL:0000625!5.85e-11!11;CL:0000791!1.31e-10!18;CL:0000789!1.31e-10!18;CL:0002420!1.31e-10!18;CL:0002419!1.31e-10!18;CL:0000790!1.31e-10!18;CL:0000094!6.19e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.51e-18;11!CL:0000791;6.88e-14;18!CL:0000789;6.88e-14;18!CL:0002419;6.88e-14;18!CL:0000094;8.81e-13;8!CL:0000084;6.75e-09;25!CL:0000081;9.29e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.49e-18,11;CL:0000791,5.26e-14,18;CL:0000789,5.26e-14,18;CL:0002420,5.26e-14,18;CL:0002419,5.26e-14,18;CL:0000790,5.26e-14,18;CL:0000094,4.34e-13,8;CL:0000084,5.64e-09,25;CL:0000827,5.64e-09,25;CL:0000081,5.70e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.88e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-40!115;UBERON:0001049!5.04e-22!57;UBERON:0005068!5.04e-22!57;UBERON:0006241!5.04e-22!57;UBERON:0007135!5.04e-22!57;UBERON:0002616!5.92e-18!59;UBERON:0002780!1.06e-17!41;UBERON:0001890!1.06e-17!41;UBERON:0006240!1.06e-17!41;UBERON:0000955!2.50e-17!69;UBERON:0006238!2.50e-17!69;UBERON:0001017!6.01e-17!82;UBERON:0003080!6.39e-17!42;UBERON:0005743!4.85e-16!86;UBERON:0001893!1.13e-15!34;UBERON:0002020!1.30e-15!34;UBERON:0003528!1.30e-15!34;UBERON:0002791!4.05e-15!33;UBERON:0001869!9.53e-15!32;UBERON:0000073!3.29e-14!94;UBERON:0001016!3.29e-14!94;UBERON:0003075!1.36e-13!86;UBERON:0007284!1.36e-13!86;UBERON:0002346!1.07e-12!90;UBERON:0002619!2.77e-12!22;UBERON:0001950!5.45e-11!20;UBERON:0000956!1.37e-10!25;UBERON:0000203!1.37e-10!25;UBERON:0003056!1.32e-08!61;UBERON:0000153!1.89e-08!129;UBERON:0007811!1.89e-08!129;UBERON:0000178!2.27e-07!15;UBERON:0000179!2.27e-07!15;UBERON:0000463!2.27e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.20e-20;34!UBERON:0001869;5.14e-20;32!UBERON:0002791;5.21e-20;32!UBERON:0002780;1.37e-19;41!UBERON:0001890;1.37e-19;41!UBERON:0003528;3.65e-19;34!UBERON:0002020;3.65e-19;34!UBERON:0000073;1.25e-18;53!UBERON:0002616;1.25e-18;53!UBERON:0002619;1.79e-18;22!UBERON:0001950;3.25e-16;20!UBERON:0000956;1.13e-15;25!UBERON:0000203;1.13e-15;25!UBERON:0000178;2.26e-13;15!UBERON:0000179;2.26e-13;15!UBERON:0000463;2.26e-13;15!UBERON:0000955;4.55e-12;68!UBERON:0007023;6.48e-12;114!UBERON:0001017;1.73e-11;75!UBERON:0001016;8.23e-10;83!UBERON:0009663;3.86e-09;7!UBERON:0002420;4.04e-09;9!UBERON:0007245;4.04e-09;9!UBERON:0010009;4.04e-09;9!UBERON:0010011;4.04e-09;9!UBERON:0000454;4.04e-09;9!UBERON:0002390;6.26e-09;32!UBERON:0000125;9.51e-09;9!UBERON:0002308;9.51e-09;9!UBERON:0002021;1.52e-07;5!UBERON:0001872;3.50e-07;5!UBERON:0004733;4.82e-07;12!UBERON:0002028;4.82e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-43,114;UBERON:0001049,2.95e-33,56;UBERON:0005068,2.95e-33,56;UBERON:0006241,2.95e-33,56;UBERON:0007135,2.95e-33,56;UBERON:0000073,5.86e-32,53;UBERON:0002616,5.86e-32,53;UBERON:0002780,5.75e-26,41;UBERON:0001890,5.75e-26,41;UBERON:0003080,5.75e-26,41;UBERON:0006240,5.75e-26,41;UBERON:0000955,8.39e-26,68;UBERON:0006238,8.39e-26,68;UBERON:0001893,1.35e-24,34;UBERON:0001017,1.82e-23,81;UBERON:0003075,2.87e-23,82;UBERON:0007284,2.87e-23,82;UBERON:0001869,6.21e-23,32;UBERON:0003528,8.18e-23,34;UBERON:0002020,8.18e-23,34;UBERON:0002791,8.81e-23,32;UBERON:0002346,1.48e-21,86;UBERON:0001016,8.29e-20,89;UBERON:0002619,2.20e-18,22;UBERON:0010371,1.42e-17,104;UBERON:0001950,4.22e-16,20;UBERON:0000956,1.34e-15,25;UBERON:0000203,1.34e-15,25;UBERON:0003056,1.45e-15,61;UBERON:0000178,1.81e-13,15;UBERON:0000179,1.81e-13,15;UBERON:0000463,1.81e-13,15;UBERON:0010314,2.19e-12,132;UBERON:0002420,3.30e-09,9;UBERON:0007245,3.30e-09,9;UBERON:0010009,3.30e-09,9;UBERON:0010011,3.30e-09,9;UBERON:0000454,3.30e-09,9;UBERON:0009663,3.42e-09,7;UBERON:0011216,6.73e-09,223;UBERON:0000125,7.62e-09,9;UBERON:0002308,7.62e-09,9;UBERON:0004121,1.11e-08,171;UBERON:0000924,1.11e-08,171;UBERON:0006601,1.11e-08,171;UBERON:0003076,2.00e-08,15;UBERON:0003057,2.00e-08,15;UBERON:0002021,1.60e-07,5;UBERON:0004733,3.23e-07,12;UBERON:0002028,3.23e-07,12;UBERON:0007277,3.23e-07,12;UBERON:0001872,3.45e-07,5;UBERON:0000025,5.69e-07,192 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.157421562627358,1.96682138424452,11.8987113410136,2.78669021968937,0,0,0,0,0,0,3.32397245119126,3.81034450193269,4.12320654360118,0.671746422719773,2.26725566213286,0,0.290796477559129,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0,0.898893937780338,0.612167784741805,0.320929027076094,0.639337125799041,0,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,1.10483290796269,0,0,0.212604299965044,0.419317291016752,0.786300418025466,0.600707571366025,1.76798145366788,0,0,0,0,1.09227722252426,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0.393419540227666,1.96505381374582,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.226618685395132,6.13152789763074,3.4362744548263,2.02415753615602,6.68987370080603,14.9749194386976,12.3558765778289,6.625305239422,6.2713439465665,9.99445812418767,5.20909954496837,17.243687935342,13.3060450528323,15.2440911596599,13.1790207533347,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,1.57174890597255,0,0,0.324547393654683,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,1.75591048352335,1.83892677479412,0.150238058906597,0,0.89694817844431,0,0,0.300091096084402,0.206105058476878,2.31876486041066,0,1.5189869901714,0.292311015483596,0.504867548488229,0.184099797284599,0,0,0.403008392910561,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.784596007954691,15.5654300559523,13.1532820664306,15.5295073898496,0,0,0,0.335032530668698,0,11.2351053592077,14.9580729602012,21.9640222121099,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0.184369168541703,0,0,0,3.72182447021197,3.01999881146064,8.53820462427555,0,0,0,0,0.920771839728375,0.280660094433074,0.256278298511402,0,0.160853921143607,1.48418066444991,0,0,0,1.03850885836724,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,3.21367859688319,0,0,0.15350367472613,0,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,3.55213326462519,9.1756464857085,3.98753031021914,2.1440859791201,2.87953591160336,2.59389324477087,4.32025149790492,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.445773537109913,0,0,0.296964680832639,0,0,3.93874365949436,0,0,0,1.9924798825107,0.828851746593443,0,0.102268682502155,0,0.933118762985422,0,0,0,1.28236427328014,7.18449277040819,3.33410970433911,0.969332746095218,1.85536196323703,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,1.77148277162768,3.61789315876224,6.10326945268333,12.6060356321596,10.0486190444206,1.97446857438575,0,0,2.84715956464049,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,1.14581926067151,0,3.27970224015475,0,0,0,1.57833761139756,0,0.61214552326098,0.695052375913368,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.57254001417827,4.98759494167688,0,0,0,0.193978032976839,1.3238419003725,1.35588444468319,0,0,3.67202616544096,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,1.08723364858891,0.523014231561666,0,0,1.20084057741958,1.9166753044879,0,0.429765441419957,0,1.39641200636127,1.60412296808179,0,0.199679000498991,0.858452096273142,2.23171457441873,1.5452198671947,1.44119953416961,0,0,0,0,0,0,2.38568906942791,2.45166131000836,0,0.137539436597234,0,0,0.77380195455795,2.42998226632099,0,1.26089131678717,0.314727528809989,0,0,0,0,0.662091970365432,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0.439656701034247,1.32506888912221,1.68067843270016,0.92562821219883,0,0,3.41719720216623,1.41483874589699,2.48543433208317,0,0.988058159489721,0,0,0,0.5013797880454,0,0.327872630709804,0,0.886068179966986,1.22026264901963,3.1297732676625,2.29363678276028,2.5513681853476,1.92498849118289,0,0,0,0,0,3.27834434064817,1.88397337194073,0.298509605773748,0.233713309847224,0,0,0,0,0,0.453692771289717,0,0.147855149989634,0.477890301491107,0,0.465788870628778,0,0,0,0.300515217994437,0,2.03435366602331,0.181848659202559,0.107410557042488,0,0,0,1.03018711554838,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0,0.617602894321944,0,0,0.38582807654183,0.168942440653073,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0.371807292777007,0,0.954013051960256,0,0,0.352675943690684,0.6124909547064,2.376481328569,2.8339315265117,3.35231104020018,1.43581454968528,3.52900374710405,2.07471757392654,1.61475645631851,0,0,0,0,0,0.381382095467167,0,0,3.91093707416138,0,0,0,0,0,1.82351478469666,2.34323429584154,4.13373593002368,1.8390584956233,1.09394961803644,0,0.496211178389294,0,0.127762427639595,1.07140367175657,0.336283722218824,0.606965604236632,5.23623040107984,0.177404740325278,0,0,2.65081958609644,2.63091094251396,0,0,2.27629969266491,4.71346769748006,0,1.82631744101899,0,0,1.6439605160631,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0.231522474323834,0,0,0.735444965261716,0,0.785233868459781,1.78227840196252,2.5359343655004,1.86919826156599,1.97366227757693,1.67590508731301,0,0,0,0,0.730336388246517,0,1.14671666521161,0.315543124386369,1.49581278420012,2.61810414204226,0.5290268405154,0.743990036333503,0,0,0.126166424835079,0,0.633492505057185,0,0,0.0918948995348449,0,0.909344378618873,2.14371304124943,0,1.03432995861895,2.34557380091079,0.714193294391221,1.16260037704811,1.36564371450887,0.112131862580613,0.318235791390825,0,0.435433495793923,0,0.26940821205835,0.645499848534087,0,0,0,0,0,2.34640942403454,2.07810455110873,0.406896178315738,3.32878387092756,0.201273793591026,0 | |||
|short_description=p6@SYNE1 | |||
}} |
Revision as of 14:41, 22 January 2014
Short description: | p6@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYNE1_5end |
Coexpression cluster: | C4575_Neutrophils_cerebellum_Natural_CD8_Basophils_pituitary_Eosinophils |
Association with transcript: | -21bp_to_ENST00000367248_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | F5GXQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.49e-18 | 11 |
mature alpha-beta T cell | 5.26e-14 | 18 |
alpha-beta T cell | 5.26e-14 | 18 |
immature T cell | 5.26e-14 | 18 |
mature T cell | 5.26e-14 | 18 |
immature alpha-beta T cell | 5.26e-14 | 18 |
granulocyte | 4.34e-13 | 8 |
T cell | 5.64e-09 | 25 |
pro-T cell | 5.64e-09 | 25 |
blood cell | 5.70e-09 | 11 |