FFCP PHASE1:Mm9::chr3:118133334..118133395,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:118133334..118133395,+|id=chr3:118133334..118133395,+|ontology_enrichment_celltype=CL:0000540!7.29e-22!33;CL:0000047!7.29e-22!33;CL:0000031!7.29e-22!33;CL:0000404!7.29e-22!33;CL:0000117!2.72e-17!23;CL:0000337!2.72e-17!23;CL:0002319!7.09e-17!43;CL:0000393!3.62e-16!39;CL:0000211!3.62e-16!39;CL:0000221!3.91e-16!44;CL:0000133!3.91e-16!44;CL:0000055!2.21e-12!50;CL:0000107!8.18e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,7.82e-34,33;CL:0000047,7.82e-34,33;CL:0000031,7.82e-34,33;CL:0000404,7.82e-34,33;CL:0000393,3.57e-27,39;CL:0000211,3.57e-27,39;CL:0002319,1.71e-25,43;CL:0000117,4.14e-25,23;CL:0000337,4.14e-25,23;CL:0000221,1.07e-24,44;CL:0000133,1.07e-24,44;CL:0002321,4.07e-12,70;CL:0000107,8.69e-11,9;CL:0000723,9.24e-07,91;CL:0000048,9.24e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.72e-36!73;UBERON:0005743!1.72e-36!73;UBERON:0000073!1.95e-36!75;UBERON:0001016!1.95e-36!75;UBERON:0002346!1.58e-29!71;UBERON:0003075!1.58e-29!71;UBERON:0007284!1.58e-29!71;UBERON:0004121!1.61e-29!102;UBERON:0000924!1.61e-29!102;UBERON:0006601!1.61e-29!102;UBERON:0001049!2.33e-27!52;UBERON:0005068!2.33e-27!52;UBERON:0006241!2.33e-27!52;UBERON:0007135!2.33e-27!52;UBERON:0000955!5.85e-26!50;UBERON:0006238!5.85e-26!50;UBERON:0002616!2.56e-25!49;UBERON:0000033!2.53e-21!63;UBERON:0002020!3.66e-21!34;UBERON:0003080!5.34e-21!40;UBERON:0002780!3.55e-20!39;UBERON:0001890!3.55e-20!39;UBERON:0006240!3.55e-20!39;UBERON:0003056!2.92e-19!49;UBERON:0002791!1.33e-17!29;UBERON:0003528!1.33e-17!29;UBERON:0001893!1.33e-17!29;UBERON:0000956!1.01e-11!21;UBERON:0001869!1.01e-11!21;UBERON:0000203!1.01e-11!21;UBERON:0007811!1.31e-11!86;UBERON:0000153!1.68e-10!94;UBERON:0002619!7.80e-10!17;UBERON:0002021!1.75e-08!10;UBERON:0000411!1.75e-08!10;UBERON:0001950!1.75e-08!10;UBERON:0002420!3.17e-07!8;UBERON:0007245!3.17e-07!8;UBERON:0010009!3.17e-07!8;UBERON:0010011!3.17e-07!8;UBERON:0000454!3.17e-07!8;UBERON:0003076!7.49e-07!12;UBERON:0003057!7.49e-07!12;UBERON:0002410!8.18e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.66e-54,73;UBERON:0001016,2.57e-52,75;UBERON:0000073,9.98e-41,54;UBERON:0004121,3.95e-38,95;UBERON:0000924,3.95e-38,95;UBERON:0006601,3.95e-38,95;UBERON:0001049,8.45e-38,52;UBERON:0005068,8.45e-38,52;UBERON:0006241,8.45e-38,52;UBERON:0007135,8.45e-38,52;UBERON:0002346,5.31e-34,64;UBERON:0003075,5.31e-34,64;UBERON:0007284,5.31e-34,64;UBERON:0002020,3.10e-33,34;UBERON:0000955,2.27e-31,47;UBERON:0006238,2.27e-31,47;UBERON:0002616,2.52e-30,46;UBERON:0010371,3.13e-28,73;UBERON:0003080,3.88e-28,40;UBERON:0003528,4.79e-27,29;UBERON:0002791,4.79e-27,29;UBERON:0001893,4.79e-27,29;UBERON:0002780,8.84e-27,39;UBERON:0001890,8.84e-27,39;UBERON:0006240,8.84e-27,39;UBERON:0010314,3.55e-23,92;UBERON:0003056,3.23e-21,49;UBERON:0002619,4.28e-17,17;UBERON:0000956,6.33e-17,21;UBERON:0001869,6.33e-17,21;UBERON:0000203,6.33e-17,21;UBERON:0002021,1.05e-13,10;UBERON:0000411,1.05e-13,10;UBERON:0001950,1.05e-13,10;UBERON:0011216,1.11e-11,194;UBERON:0002420,1.66e-11,8;UBERON:0007245,1.66e-11,8;UBERON:0010009,1.66e-11,8;UBERON:0010011,1.66e-11,8;UBERON:0000454,1.66e-11,8;UBERON:0000025,7.14e-11,114;UBERON:0002410,8.69e-11,9;UBERON:0003076,1.15e-09,12;UBERON:0003057,1.15e-09,12;UBERON:0004111,1.91e-09,122;UBERON:0000010,1.80e-08,11;UBERON:0002240,1.80e-08,6;UBERON:0005174,1.80e-08,6;UBERON:0001137,1.80e-08,6;UBERON:0000369,5.94e-08,5;UBERON:0002435,5.94e-08,5;UBERON:0000204,5.94e-08,5;UBERON:0010082,5.94e-08,5;UBERON:0001948,2.79e-07,5;UBERON:0002315,2.79e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0,0,0,0,0,0,0,0,0,6.06949382578793,8.46385566835253,3.1691570175309,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.08004750665353,0.630974884054146,3.42781181284564,4.8591079009355,7.22695715368229,8.24271050756833,3.67687514644008,4.40463523997555,4.21368215681119,5.52983519722476,6.98997324970027,4.39140689291566,4.68822033501084,4.18774498502071,3.93933827022176,3.51435969886663,5.00868595305235,2.84743361598206,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,1.38788261412909,1.52232739156071,0,1.3565037649736,0.940709657085638,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,5.24267237916879,5.03250663100489,2.76439574648302,6.08385120672968,2.81287003063364,5.61027720310812,2.43361894601636,0,0,0,0,0,0.459804208866946,0,0.150704817835715,0.204109497453984,0.512454881139399,0.187403449119458,0.258703370739016,0.862271971731369,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.44066457330998,0,0,0.426576501070468,1.39342003116263,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.964887042726734,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.93029216480508,0,0,2.83957397474631,4.29482618726302,3.87762115919038,1.43381278771531,1.78238939265915,1.98153571552183,5.66734982344852,2.92255857911312,2.37172666767914,2.57057053137446,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,1.08036656418786,1.16422815404479,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,2.76195141904306,3.43737308063638,3.26521046453006,2.74033007908257,3.0215755895588,7.42524750254986,5.40385443869065,5.89085131679466,3.62432218226274,0.415149390336707,1.59609949360412,2.39027048055788,0,0.209613162627982,0,1.33348036680969,0.412070114477788,0.64183841918363,0.758091635291392,1.2673964994512,0.754505365544305,0.37456602987953,0.256100609619477,0.459483751644906,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,1.03039244094078,0,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.711810108745045,0.591026894253381,0,0.929621047115796,0.192906610981141,1.49886346762768,0,0.214871054048298,0,0.661774257358546,0|short_description=p@chr3:118133334..118133395,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:118133334..118133395,+ | |||
|description=CAGE_peak_at_chr3:118133334..118133395,+ | |||
|id=chr3:118133334..118133395,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.29e-22!33;CL:0000047!7.29e-22!33;CL:0000031!7.29e-22!33;CL:0000404!7.29e-22!33;CL:0000117!2.72e-17!23;CL:0000337!2.72e-17!23;CL:0002319!7.09e-17!43;CL:0000393!3.62e-16!39;CL:0000211!3.62e-16!39;CL:0000221!3.91e-16!44;CL:0000133!3.91e-16!44;CL:0000055!2.21e-12!50;CL:0000107!8.18e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.82e-34,33;CL:0000047,7.82e-34,33;CL:0000031,7.82e-34,33;CL:0000404,7.82e-34,33;CL:0000393,3.57e-27,39;CL:0000211,3.57e-27,39;CL:0002319,1.71e-25,43;CL:0000117,4.14e-25,23;CL:0000337,4.14e-25,23;CL:0000221,1.07e-24,44;CL:0000133,1.07e-24,44;CL:0002321,4.07e-12,70;CL:0000107,8.69e-11,9;CL:0000723,9.24e-07,91;CL:0000048,9.24e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-36!73;UBERON:0005743!1.72e-36!73;UBERON:0000073!1.95e-36!75;UBERON:0001016!1.95e-36!75;UBERON:0002346!1.58e-29!71;UBERON:0003075!1.58e-29!71;UBERON:0007284!1.58e-29!71;UBERON:0004121!1.61e-29!102;UBERON:0000924!1.61e-29!102;UBERON:0006601!1.61e-29!102;UBERON:0001049!2.33e-27!52;UBERON:0005068!2.33e-27!52;UBERON:0006241!2.33e-27!52;UBERON:0007135!2.33e-27!52;UBERON:0000955!5.85e-26!50;UBERON:0006238!5.85e-26!50;UBERON:0002616!2.56e-25!49;UBERON:0000033!2.53e-21!63;UBERON:0002020!3.66e-21!34;UBERON:0003080!5.34e-21!40;UBERON:0002780!3.55e-20!39;UBERON:0001890!3.55e-20!39;UBERON:0006240!3.55e-20!39;UBERON:0003056!2.92e-19!49;UBERON:0002791!1.33e-17!29;UBERON:0003528!1.33e-17!29;UBERON:0001893!1.33e-17!29;UBERON:0000956!1.01e-11!21;UBERON:0001869!1.01e-11!21;UBERON:0000203!1.01e-11!21;UBERON:0007811!1.31e-11!86;UBERON:0000153!1.68e-10!94;UBERON:0002619!7.80e-10!17;UBERON:0002021!1.75e-08!10;UBERON:0000411!1.75e-08!10;UBERON:0001950!1.75e-08!10;UBERON:0002420!3.17e-07!8;UBERON:0007245!3.17e-07!8;UBERON:0010009!3.17e-07!8;UBERON:0010011!3.17e-07!8;UBERON:0000454!3.17e-07!8;UBERON:0003076!7.49e-07!12;UBERON:0003057!7.49e-07!12;UBERON:0002410!8.18e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.66e-54,73;UBERON:0001016,2.57e-52,75;UBERON:0000073,9.98e-41,54;UBERON:0004121,3.95e-38,95;UBERON:0000924,3.95e-38,95;UBERON:0006601,3.95e-38,95;UBERON:0001049,8.45e-38,52;UBERON:0005068,8.45e-38,52;UBERON:0006241,8.45e-38,52;UBERON:0007135,8.45e-38,52;UBERON:0002346,5.31e-34,64;UBERON:0003075,5.31e-34,64;UBERON:0007284,5.31e-34,64;UBERON:0002020,3.10e-33,34;UBERON:0000955,2.27e-31,47;UBERON:0006238,2.27e-31,47;UBERON:0002616,2.52e-30,46;UBERON:0010371,3.13e-28,73;UBERON:0003080,3.88e-28,40;UBERON:0003528,4.79e-27,29;UBERON:0002791,4.79e-27,29;UBERON:0001893,4.79e-27,29;UBERON:0002780,8.84e-27,39;UBERON:0001890,8.84e-27,39;UBERON:0006240,8.84e-27,39;UBERON:0010314,3.55e-23,92;UBERON:0003056,3.23e-21,49;UBERON:0002619,4.28e-17,17;UBERON:0000956,6.33e-17,21;UBERON:0001869,6.33e-17,21;UBERON:0000203,6.33e-17,21;UBERON:0002021,1.05e-13,10;UBERON:0000411,1.05e-13,10;UBERON:0001950,1.05e-13,10;UBERON:0011216,1.11e-11,194;UBERON:0002420,1.66e-11,8;UBERON:0007245,1.66e-11,8;UBERON:0010009,1.66e-11,8;UBERON:0010011,1.66e-11,8;UBERON:0000454,1.66e-11,8;UBERON:0000025,7.14e-11,114;UBERON:0002410,8.69e-11,9;UBERON:0003076,1.15e-09,12;UBERON:0003057,1.15e-09,12;UBERON:0004111,1.91e-09,122;UBERON:0000010,1.80e-08,11;UBERON:0002240,1.80e-08,6;UBERON:0005174,1.80e-08,6;UBERON:0001137,1.80e-08,6;UBERON:0000369,5.94e-08,5;UBERON:0002435,5.94e-08,5;UBERON:0000204,5.94e-08,5;UBERON:0010082,5.94e-08,5;UBERON:0001948,2.79e-07,5;UBERON:0002315,2.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0,0,0,0,0,0,0,0,0,6.06949382578793,8.46385566835253,3.1691570175309,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.08004750665353,0.630974884054146,3.42781181284564,4.8591079009355,7.22695715368229,8.24271050756833,3.67687514644008,4.40463523997555,4.21368215681119,5.52983519722476,6.98997324970027,4.39140689291566,4.68822033501084,4.18774498502071,3.93933827022176,3.51435969886663,5.00868595305235,2.84743361598206,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,1.38788261412909,1.52232739156071,0,1.3565037649736,0.940709657085638,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,5.24267237916879,5.03250663100489,2.76439574648302,6.08385120672968,2.81287003063364,5.61027720310812,2.43361894601636,0,0,0,0,0,0.459804208866946,0,0.150704817835715,0.204109497453984,0.512454881139399,0.187403449119458,0.258703370739016,0.862271971731369,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.44066457330998,0,0,0.426576501070468,1.39342003116263,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.964887042726734,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.93029216480508,0,0,2.83957397474631,4.29482618726302,3.87762115919038,1.43381278771531,1.78238939265915,1.98153571552183,5.66734982344852,2.92255857911312,2.37172666767914,2.57057053137446,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,1.08036656418786,1.16422815404479,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,2.76195141904306,3.43737308063638,3.26521046453006,2.74033007908257,3.0215755895588,7.42524750254986,5.40385443869065,5.89085131679466,3.62432218226274,0.415149390336707,1.59609949360412,2.39027048055788,0,0.209613162627982,0,1.33348036680969,0.412070114477788,0.64183841918363,0.758091635291392,1.2673964994512,0.754505365544305,0.37456602987953,0.256100609619477,0.459483751644906,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,1.03039244094078,0,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.711810108745045,0.591026894253381,0,0.929621047115796,0.192906610981141,1.49886346762768,0,0.214871054048298,0,0.661774257358546,0 | |||
|short_description=p@chr3:118133334..118133395,+ | |||
}} |
Latest revision as of 22:38, 5 August 2015
Short description: | p@chr3:118133334..118133395, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:118133334..118133395, + |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.82e-34 | 33 |
neuronal stem cell | 7.82e-34 | 33 |
neuroblast | 7.82e-34 | 33 |
electrically signaling cell | 7.82e-34 | 33 |
electrically responsive cell | 3.57e-27 | 39 |
electrically active cell | 3.57e-27 | 39 |
neural cell | 1.71e-25 | 43 |
CNS neuron (sensu Vertebrata) | 4.14e-25 | 23 |
neuroblast (sensu Vertebrata) | 4.14e-25 | 23 |
ectodermal cell | 1.07e-24 | 44 |
neurectodermal cell | 1.07e-24 | 44 |
embryonic cell | 4.07e-12 | 70 |
autonomic neuron | 8.69e-11 | 9 |
somatic stem cell | 9.24e-07 | 91 |
multi fate stem cell | 9.24e-07 | 91 |