FFCP PHASE1:Hg19::chr9:130616926..130616944,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3349 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000545345_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_ENG_5end | |||
|id=chr9:130616926..130616944,- | |||
|ontology_enrichment_celltype=CL:0000222!6.09e-20!119;CL:0000115!1.09e-19!35;CL:0002139!1.39e-16!24;CL:0000055!6.55e-16!180;CL:0002078!6.37e-15!44;CL:0000071!5.65e-13!18;CL:0002546!5.65e-13!18;CL:0000057!1.63e-12!75;CL:0000183!6.38e-11!59;CL:0000680!6.81e-11!57;CL:0000056!6.81e-11!57;CL:0000355!6.81e-11!57;CL:0000213!2.40e-10!57;CL:0000215!2.40e-10!57;CL:0000187!5.12e-10!54;CL:0000359!1.83e-08!32;CL:0000192!1.84e-08!42;CL:0000514!1.84e-08!42;CL:0002494!6.66e-08!16;CL:1000413!1.67e-07!9;CL:0000393!2.68e-07!60;CL:0000211!2.68e-07!60;CL:0000048!4.80e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.55e-17;36!CL:0002139;9.02e-17;24!CL:0000071;4.05e-13;18!CL:0002078;7.36e-11;45!CL:0000359;2.81e-08;32!CL:0002494;5.61e-08;16!CL:1000413;1.40e-07;9!CL:0000213;3.02e-07;58!CL:0000215;3.02e-07;58!CL:0002334;8.63e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.34e-20,36;CL:0000222,1.78e-20,121;CL:0002139,9.04e-17,24;CL:0002078,9.23e-16,45;CL:0000071,4.07e-13,18;CL:0002546,4.07e-13,18;CL:0000057,5.67e-13,76;CL:0000213,6.84e-11,58;CL:0000215,6.84e-11,58;CL:0000680,7.92e-11,58;CL:0000056,7.92e-11,58;CL:0000355,7.92e-11,58;CL:0000187,6.01e-10,55;CL:0000359,1.50e-08,32;CL:0000192,2.32e-08,43;CL:0000514,2.32e-08,43;CL:0002494,5.55e-08,16;CL:1000413,1.41e-07,9;CL:0000048,3.38e-07,427;CL:0000393,5.29e-07,61;CL:0000211,5.29e-07,61;CL:0002334,8.80e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;4.05e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.80e-30!84;UBERON:0002049!1.45e-28!79;UBERON:0007798!1.45e-28!79;UBERON:0000055!5.12e-28!69;UBERON:0001009!9.66e-27!113;UBERON:0004535!2.62e-25!110;UBERON:0001981!2.43e-24!60;UBERON:0007500!2.43e-24!60;UBERON:0004537!2.43e-24!60;UBERON:0006965!2.43e-24!60;UBERON:0003914!7.08e-22!118;UBERON:0003081!1.08e-20!216;UBERON:0000468!1.20e-19!659;UBERON:0000467!6.94e-18!625;UBERON:0000480!1.60e-17!626;UBERON:0001637!1.07e-16!42;UBERON:0003509!1.07e-16!42;UBERON:0004572!1.07e-16!42;UBERON:0000477!1.09e-16!286;UBERON:0004111!4.78e-15!241;UBERON:0000025!7.72e-15!194;UBERON:0004573!6.29e-14!33;UBERON:0004571!6.29e-14!33;UBERON:0000926!7.36e-14!448;UBERON:0004120!7.36e-14!448;UBERON:0006603!7.36e-14!448;UBERON:0001986!5.65e-13!18;UBERON:0004638!5.65e-13!18;UBERON:0004852!5.65e-13!18;UBERON:0004290!7.56e-13!70;UBERON:0007100!1.01e-12!27;UBERON:0002204!1.04e-12!167;UBERON:0000490!4.38e-12!138;UBERON:0000914!4.93e-12!83;UBERON:0002329!4.93e-12!83;UBERON:0003077!4.93e-12!83;UBERON:0003059!4.93e-12!83;UBERON:0007282!4.93e-12!83;UBERON:0009618!4.93e-12!83;UBERON:0007285!4.93e-12!83;UBERON:0002385!7.56e-12!63;UBERON:0001015!7.56e-12!63;UBERON:0000383!7.56e-12!63;UBERON:0001134!8.97e-12!61;UBERON:0002036!8.97e-12!61;UBERON:0003082!8.97e-12!61;UBERON:0000119!1.46e-11!312;UBERON:0000948!2.66e-11!24;UBERON:0005498!2.66e-11!24;UBERON:0004140!2.66e-11!24;UBERON:0009881!2.66e-11!24;UBERON:0004141!2.66e-11!24;UBERON:0003084!2.66e-11!24;UBERON:0007005!2.66e-11!24;UBERON:0004139!2.66e-11!24;UBERON:0004291!2.66e-11!24;UBERON:0000487!6.39e-11!22;UBERON:0000479!6.58e-11!787;UBERON:0000483!9.48e-11!309;UBERON:0002050!1.05e-10!605;UBERON:0005423!1.05e-10!605;UBERON:0006914!1.31e-10!25;UBERON:0000923!1.87e-10!604;UBERON:0005291!1.87e-10!604;UBERON:0006598!1.87e-10!604;UBERON:0002532!1.87e-10!604;UBERON:0000922!5.53e-10!612;UBERON:0000486!9.08e-10!82;UBERON:0000947!3.71e-09!21;UBERON:0010191!3.71e-09!21;UBERON:0005256!8.79e-09!143;UBERON:0007023!7.97e-08!115;UBERON:0003915!1.67e-07!9;UBERON:0004700!1.67e-07!9;UBERON:0001917!1.67e-07!9;UBERON:0002100!7.64e-07!216;UBERON:0003103!8.90e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;1.83e-13;65!UBERON:0001637;3.37e-13;42!UBERON:0003509;3.37e-13;42!UBERON:0004572;3.37e-13;42!UBERON:0004638;4.05e-13;18!UBERON:0001986;4.05e-13;18!UBERON:0004852;4.05e-13;18!UBERON:0004573;4.96e-13;33!UBERON:0004571;4.96e-13;33!UBERON:0007500;1.52e-12;56!UBERON:0001981;1.52e-12;56!UBERON:0004537;1.52e-12;56!UBERON:0007100;2.63e-12;25!UBERON:0000487;3.49e-11;22!UBERON:0006914;6.03e-11;25!UBERON:0000948;7.24e-11;22!UBERON:0002049;7.50e-11;75!UBERON:0007798;7.50e-11;75!UBERON:0000947;2.85e-09;21!UBERON:0010191;2.85e-09;21!UBERON:0003914;2.50e-08;74!UBERON:0001009;4.40e-08;112!UBERON:0004535;1.16e-07;109!UBERON:0003915;1.40e-07;9!UBERON:0004700;1.40e-07;9!UBERON:0001917;1.40e-07;9 | |||
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| |||
|short_description=p1@ENG | |||
}} |
Revision as of 03:26, 23 January 2014
Short description: | p1@ENG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENG_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000545345_5end |
EntrezGene: | ENG |
HGNC: | 3349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.34e-20 | 36 |
mesodermal cell | 1.78e-20 | 121 |
endothelial cell of vascular tree | 9.04e-17 | 24 |
meso-epithelial cell | 9.23e-16 | 45 |
blood vessel endothelial cell | 4.07e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.07e-13 | 18 |
fibroblast | 5.67e-13 | 76 |
lining cell | 6.84e-11 | 58 |
barrier cell | 6.84e-11 | 58 |
muscle precursor cell | 7.92e-11 | 58 |
myoblast | 7.92e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.92e-11 | 58 |
muscle cell | 6.01e-10 | 55 |
vascular associated smooth muscle cell | 1.50e-08 | 32 |
smooth muscle cell | 2.32e-08 | 43 |
smooth muscle myoblast | 2.32e-08 | 43 |
cardiocyte | 5.55e-08 | 16 |
endothelial cell of artery | 1.41e-07 | 9 |
multi fate stem cell | 3.38e-07 | 427 |
electrically responsive cell | 5.29e-07 | 61 |
electrically active cell | 5.29e-07 | 61 |
preadipocyte | 8.80e-07 | 12 |