FFCP PHASE1:Mm9::chr13:100197274..100197293,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:100197274..100197293,- | |id=chr13:100197274..100197293,- | ||
|ontology_enrichment_celltype=CL:0000540!9.39e-17!33;CL:0000047!9.39e-17!33;CL:0000031!9.39e-17!33;CL:0000404!9.39e-17!33;CL:0000117!1.59e-16!23;CL:0000337!1.59e-16!23;CL:0002319!2.39e-14!43;CL:0000221!3.52e-14!44;CL:0000133!3.52e-14!44;CL:0000393!1.06e-12!39;CL:0000211!1.06e-12!39;CL:0000055!8.88e-11!50 | |ontology_enrichment_celltype=CL:0000540!9.39e-17!33;CL:0000047!9.39e-17!33;CL:0000031!9.39e-17!33;CL:0000404!9.39e-17!33;CL:0000117!1.59e-16!23;CL:0000337!1.59e-16!23;CL:0002319!2.39e-14!43;CL:0000221!3.52e-14!44;CL:0000133!3.52e-14!44;CL:0000393!1.06e-12!39;CL:0000211!1.06e-12!39;CL:0000055!8.88e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-33,23;CL:0000337,3.32e-33,23;CL:0000540,1.33e-23,33;CL:0000047,1.33e-23,33;CL:0000031,1.33e-23,33;CL:0000404,1.33e-23,33;CL:0000393,5.05e-19,39;CL:0000211,5.05e-19,39;CL:0002319,1.09e-16,43;CL:0000221,3.59e-16,44;CL:0000133,3.59e-16,44;CL:0002321,5.06e-08,70;CL:0002609,8.28e-08,6;CL:0002610,3.06e-07,3;CL:0002612,6.27e-07,3;CL:0002613,6.27e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.89e-28!75;UBERON:0001016!7.89e-28!75;UBERON:0001017!1.88e-27!73;UBERON:0005743!1.88e-27!73;UBERON:0002346!1.89e-26!71;UBERON:0003075!1.89e-26!71;UBERON:0007284!1.89e-26!71;UBERON:0004121!4.71e-26!102;UBERON:0000924!4.71e-26!102;UBERON:0006601!4.71e-26!102;UBERON:0001049!1.43e-22!52;UBERON:0005068!1.43e-22!52;UBERON:0006241!1.43e-22!52;UBERON:0007135!1.43e-22!52;UBERON:0000033!1.72e-21!63;UBERON:0000955!1.80e-21!50;UBERON:0006238!1.80e-21!50;UBERON:0002616!5.93e-21!49;UBERON:0002020!2.91e-19!34;UBERON:0003056!1.72e-18!49;UBERON:0003080!1.16e-16!40;UBERON:0002791!3.95e-16!29;UBERON:0003528!3.95e-16!29;UBERON:0001893!3.95e-16!29;UBERON:0002780!4.98e-16!39;UBERON:0001890!4.98e-16!39;UBERON:0006240!4.98e-16!39;UBERON:0000956!8.63e-11!21;UBERON:0001869!8.63e-11!21;UBERON:0000203!8.63e-11!21;UBERON:0007811!1.22e-10!86;UBERON:0000153!1.13e-09!94;UBERON:0002619!3.32e-08!17;UBERON:0000025!3.34e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!7.89e-28!75;UBERON:0001016!7.89e-28!75;UBERON:0001017!1.88e-27!73;UBERON:0005743!1.88e-27!73;UBERON:0002346!1.89e-26!71;UBERON:0003075!1.89e-26!71;UBERON:0007284!1.89e-26!71;UBERON:0004121!4.71e-26!102;UBERON:0000924!4.71e-26!102;UBERON:0006601!4.71e-26!102;UBERON:0001049!1.43e-22!52;UBERON:0005068!1.43e-22!52;UBERON:0006241!1.43e-22!52;UBERON:0007135!1.43e-22!52;UBERON:0000033!1.72e-21!63;UBERON:0000955!1.80e-21!50;UBERON:0006238!1.80e-21!50;UBERON:0002616!5.93e-21!49;UBERON:0002020!2.91e-19!34;UBERON:0003056!1.72e-18!49;UBERON:0003080!1.16e-16!40;UBERON:0002791!3.95e-16!29;UBERON:0003528!3.95e-16!29;UBERON:0001893!3.95e-16!29;UBERON:0002780!4.98e-16!39;UBERON:0001890!4.98e-16!39;UBERON:0006240!4.98e-16!39;UBERON:0000956!8.63e-11!21;UBERON:0001869!8.63e-11!21;UBERON:0000203!8.63e-11!21;UBERON:0007811!1.22e-10!86;UBERON:0000153!1.13e-09!94;UBERON:0002619!3.32e-08!17;UBERON:0000025!3.34e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.37e-37,54;UBERON:0002020,4.62e-37,34;UBERON:0001017,2.78e-35,73;UBERON:0001016,4.50e-34,75;UBERON:0001049,5.18e-34,52;UBERON:0005068,5.18e-34,52;UBERON:0006241,5.18e-34,52;UBERON:0007135,5.18e-34,52;UBERON:0003528,1.32e-31,29;UBERON:0002791,1.32e-31,29;UBERON:0001893,1.32e-31,29;UBERON:0002346,1.29e-29,64;UBERON:0003075,1.29e-29,64;UBERON:0007284,1.29e-29,64;UBERON:0002616,5.09e-27,46;UBERON:0000955,2.80e-26,47;UBERON:0006238,2.80e-26,47;UBERON:0004121,3.28e-26,95;UBERON:0000924,3.28e-26,95;UBERON:0006601,3.28e-26,95;UBERON:0003080,3.31e-25,40;UBERON:0010371,7.93e-25,73;UBERON:0002780,8.03e-24,39;UBERON:0001890,8.03e-24,39;UBERON:0006240,8.03e-24,39;UBERON:0003056,6.32e-21,49;UBERON:0000956,6.57e-19,21;UBERON:0001869,6.57e-19,21;UBERON:0000203,6.57e-19,21;UBERON:0010314,8.31e-18,92;UBERON:0002420,2.82e-14,8;UBERON:0007245,2.82e-14,8;UBERON:0010009,2.82e-14,8;UBERON:0010011,2.82e-14,8;UBERON:0000454,2.82e-14,8;UBERON:0002021,3.02e-13,10;UBERON:0000411,3.02e-13,10;UBERON:0001950,3.02e-13,10;UBERON:0002619,5.89e-13,17;UBERON:0000025,1.11e-11,114;UBERON:0004111,2.40e-10,122;UBERON:0000369,6.63e-10,5;UBERON:0002435,6.63e-10,5;UBERON:0000204,6.63e-10,5;UBERON:0010082,6.63e-10,5;UBERON:0003076,5.60e-09,12;UBERON:0003057,5.60e-09,12;UBERON:0002240,3.77e-08,6;UBERON:0005174,3.77e-08,6;UBERON:0001137,3.77e-08,6;UBERON:0011216,1.13e-07,194;UBERON:0002950,1.97e-07,4;UBERON:0001891,1.97e-07,4;UBERON:0009616,1.97e-07,4;UBERON:0010286,1.97e-07,4;UBERON:0004684,3.06e-07,3;UBERON:0002275,3.06e-07,3;UBERON:0002257,6.27e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,3.03474691289397,4.23192783417626,1.26766280701236,0,0,0,0,0,0.299600110518405,0,3.7328260431052,2.56511282830212,2.52389953621658,1.14260393761521,0.662605622854841,1.22490799214954,1.91690942036473,0.919218786610021,3.30347642998166,4.34136949489638,4.6081959976873,2.90149833006426,3.7509933876988,2.6045668527838,1.11673199600552,2.25105044012672,2.59757021220577,5.30331453852602,4.6982654663704,1.86399445825301,0.530083353332288,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,0.587943535678524,0.376999773989026,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,1.9472783122627,2.28750301409313,1.7591609295801,1.21677024134594,1.02286182932132,0.62336413367868,1.29793010454206,0,0.373220911830279,0.505445516867349,0.420883711772948,0.520481771850815,0.229902104433473,0.180062129805349,0.753524089178575,0.816437989815934,1.15302348256365,0.562210347358373,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0,0.329119699826961,0.32833492815819,0.0810688095458557,0,0,0,0.841159794256509,3.80747065803352,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0,0,0.469380496577004,0.167506257441816,0,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0.315508219416257,1.95219372148319,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.52308073819968,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.756037385752609,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0.496375471371293,0.583353565032143,0.129159823477731,0.675824501963113,0.234714477291508,0.5208175393758,0,0.241584120826006,0.576060012515731,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0.772758376128762,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,1.03111909406213,2.74033007908257,2.2661816921691,2.02506750069542,1.80128481289688,2.26571204492102,0,0.93408612825759,0.798049746802062,0.170733605754134,0.729320151204882,1.25767897576789,0,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.749132059759059,0.256100609619477,0.516919220600519,0,0.811190281613988,1.15745532278223,0.824171801606613,0.588795680537589,1.02860775715625,1.4198064492747,0.953744759789284,1.0174249164263,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.814824683075171,1.68342681497322,0.237270036248348,0.985044823755635,0.818462086339379,0.77468420592983,0,1.49886346762768,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,3.03474691289397,4.23192783417626,1.26766280701236,0,0,0,0,0,0.299600110518405,0,3.7328260431052,2.56511282830212,2.52389953621658,1.14260393761521,0.662605622854841,1.22490799214954,1.91690942036473,0.919218786610021,3.30347642998166,4.34136949489638,4.6081959976873,2.90149833006426,3.7509933876988,2.6045668527838,1.11673199600552,2.25105044012672,2.59757021220577,5.30331453852602,4.6982654663704,1.86399445825301,0.530083353332288,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,0.587943535678524,0.376999773989026,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,1.9472783122627,2.28750301409313,1.7591609295801,1.21677024134594,1.02286182932132,0.62336413367868,1.29793010454206,0,0.373220911830279,0.505445516867349,0.420883711772948,0.520481771850815,0.229902104433473,0.180062129805349,0.753524089178575,0.816437989815934,1.15302348256365,0.562210347358373,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0,0.329119699826961,0.32833492815819,0.0810688095458557,0,0,0,0.841159794256509,3.80747065803352,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0,0,0.469380496577004,0.167506257441816,0,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0.315508219416257,1.95219372148319,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.52308073819968,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.756037385752609,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0.496375471371293,0.583353565032143,0.129159823477731,0.675824501963113,0.234714477291508,0.5208175393758,0,0.241584120826006,0.576060012515731,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0.772758376128762,0,0,0,0,1.12950368523413,2.30162618253588,2.29158205375759,1.03111909406213,2.74033007908257,2.2661816921691,2.02506750069542,1.80128481289688,2.26571204492102,0,0.93408612825759,0.798049746802062,0.170733605754134,0.729320151204882,1.25767897576789,0,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.749132059759059,0.256100609619477,0.516919220600519,0,0.811190281613988,1.15745532278223,0.824171801606613,0.588795680537589,1.02860775715625,1.4198064492747,0.953744759789284,1.0174249164263,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.814824683075171,1.68342681497322,0.237270036248348,0.985044823755635,0.818462086339379,0.77468420592983,0,1.49886346762768,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr13:100197274..100197293,- | |short_description=p@chr13:100197274..100197293,- | ||
}} | }} |
Revision as of 20:55, 13 November 2012
Short description: | p@chr13:100197274..100197293, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100197274..100197293, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.32e-33 | 23 |
neuroblast (sensu Vertebrata) | 3.32e-33 | 23 |
neuron | 1.33e-23 | 33 |
neuronal stem cell | 1.33e-23 | 33 |
neuroblast | 1.33e-23 | 33 |
electrically signaling cell | 1.33e-23 | 33 |
electrically responsive cell | 5.05e-19 | 39 |
electrically active cell | 5.05e-19 | 39 |
neural cell | 1.09e-16 | 43 |
ectodermal cell | 3.59e-16 | 44 |
neurectodermal cell | 3.59e-16 | 44 |
embryonic cell | 5.06e-08 | 70 |
neuron of cerebral cortex | 8.28e-08 | 6 |
raphe nuclei neuron | 3.06e-07 | 3 |
neuron of the ventral spinal cord | 6.27e-07 | 3 |
striatum neuron | 6.27e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.