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FFCP PHASE1:Mm9::chr6:113451944..113451957,-: Difference between revisions

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|id=chr6:113451944..113451957,-
|id=chr6:113451944..113451957,-
|ontology_enrichment_celltype=CL:0000117!3.70e-13!23;CL:0000337!3.70e-13!23;CL:0000540!4.36e-12!33;CL:0000047!4.36e-12!33;CL:0000031!4.36e-12!33;CL:0000404!4.36e-12!33;CL:0000221!2.89e-09!44;CL:0000133!2.89e-09!44;CL:0002319!9.82e-09!43;CL:0000393!1.06e-08!39;CL:0000211!1.06e-08!39
|ontology_enrichment_celltype=CL:0000117!3.70e-13!23;CL:0000337!3.70e-13!23;CL:0000540!4.36e-12!33;CL:0000047!4.36e-12!33;CL:0000031!4.36e-12!33;CL:0000404!4.36e-12!33;CL:0000221!2.89e-09!44;CL:0000133!2.89e-09!44;CL:0002319!9.82e-09!43;CL:0000393!1.06e-08!39;CL:0000211!1.06e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.03e-16,23;CL:0000337,5.03e-16,23;CL:0000540,2.07e-11,33;CL:0000047,2.07e-11,33;CL:0000031,2.07e-11,33;CL:0000404,2.07e-11,33;CL:0000393,4.76e-09,39;CL:0000211,4.76e-09,39;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44;CL:0002319,7.49e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.79e-32!73;UBERON:0005743!1.79e-32!73;UBERON:0000073!9.18e-32!75;UBERON:0001016!9.18e-32!75;UBERON:0000033!9.63e-32!63;UBERON:0001049!5.32e-29!52;UBERON:0005068!5.32e-29!52;UBERON:0006241!5.32e-29!52;UBERON:0007135!5.32e-29!52;UBERON:0004121!6.70e-29!102;UBERON:0000924!6.70e-29!102;UBERON:0006601!6.70e-29!102;UBERON:0002346!2.30e-28!71;UBERON:0003075!2.30e-28!71;UBERON:0007284!2.30e-28!71;UBERON:0000955!1.58e-27!50;UBERON:0006238!1.58e-27!50;UBERON:0003056!5.00e-27!49;UBERON:0002616!9.90e-27!49;UBERON:0003080!9.48e-23!40;UBERON:0002780!6.23e-22!39;UBERON:0001890!6.23e-22!39;UBERON:0006240!6.23e-22!39;UBERON:0002020!1.41e-19!34;UBERON:0007811!3.53e-19!86;UBERON:0000153!3.74e-17!94;UBERON:0002791!5.19e-16!29;UBERON:0003528!5.19e-16!29;UBERON:0001893!5.19e-16!29;UBERON:0000956!8.25e-11!21;UBERON:0001869!8.25e-11!21;UBERON:0000203!8.25e-11!21;UBERON:0002021!3.17e-10!10;UBERON:0000411!3.17e-10!10;UBERON:0001950!3.17e-10!10;UBERON:0002619!7.37e-09!17;UBERON:0001894!7.34e-07!10;UBERON:0006222!7.34e-07!10
|ontology_enrichment_uberon=UBERON:0001017!1.79e-32!73;UBERON:0005743!1.79e-32!73;UBERON:0000073!9.18e-32!75;UBERON:0001016!9.18e-32!75;UBERON:0000033!9.63e-32!63;UBERON:0001049!5.32e-29!52;UBERON:0005068!5.32e-29!52;UBERON:0006241!5.32e-29!52;UBERON:0007135!5.32e-29!52;UBERON:0004121!6.70e-29!102;UBERON:0000924!6.70e-29!102;UBERON:0006601!6.70e-29!102;UBERON:0002346!2.30e-28!71;UBERON:0003075!2.30e-28!71;UBERON:0007284!2.30e-28!71;UBERON:0000955!1.58e-27!50;UBERON:0006238!1.58e-27!50;UBERON:0003056!5.00e-27!49;UBERON:0002616!9.90e-27!49;UBERON:0003080!9.48e-23!40;UBERON:0002780!6.23e-22!39;UBERON:0001890!6.23e-22!39;UBERON:0006240!6.23e-22!39;UBERON:0002020!1.41e-19!34;UBERON:0007811!3.53e-19!86;UBERON:0000153!3.74e-17!94;UBERON:0002791!5.19e-16!29;UBERON:0003528!5.19e-16!29;UBERON:0001893!5.19e-16!29;UBERON:0000956!8.25e-11!21;UBERON:0001869!8.25e-11!21;UBERON:0000203!8.25e-11!21;UBERON:0002021!3.17e-10!10;UBERON:0000411!3.17e-10!10;UBERON:0001950!3.17e-10!10;UBERON:0002619!7.37e-09!17;UBERON:0001894!7.34e-07!10;UBERON:0006222!7.34e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-44,54;UBERON:0001017,9.82e-43,73;UBERON:0001016,2.49e-41,75;UBERON:0001049,2.92e-41,52;UBERON:0005068,2.92e-41,52;UBERON:0006241,2.92e-41,52;UBERON:0007135,2.92e-41,52;UBERON:0004121,7.60e-34,95;UBERON:0000924,7.60e-34,95;UBERON:0006601,7.60e-34,95;UBERON:0002346,1.08e-33,64;UBERON:0003075,1.08e-33,64;UBERON:0007284,1.08e-33,64;UBERON:0000955,1.64e-33,47;UBERON:0006238,1.64e-33,47;UBERON:0002616,5.24e-32,46;UBERON:0010371,5.56e-32,73;UBERON:0002020,2.29e-30,34;UBERON:0003080,2.61e-27,40;UBERON:0002780,8.81e-26,39;UBERON:0001890,8.81e-26,39;UBERON:0006240,8.81e-26,39;UBERON:0010314,2.00e-23,92;UBERON:0003528,4.27e-23,29;UBERON:0002791,4.27e-23,29;UBERON:0001893,4.27e-23,29;UBERON:0003056,1.09e-22,49;UBERON:0002021,1.94e-20,10;UBERON:0000411,1.94e-20,10;UBERON:0001950,1.94e-20,10;UBERON:0002619,1.22e-15,17;UBERON:0000956,1.94e-14,21;UBERON:0001869,1.94e-14,21;UBERON:0000203,1.94e-14,21;UBERON:0004111,2.28e-14,122;UBERON:0003076,3.96e-14,12;UBERON:0003057,3.96e-14,12;UBERON:0000025,6.32e-14,114;UBERON:0011216,1.40e-10,194;UBERON:0002240,1.43e-10,6;UBERON:0005174,1.43e-10,6;UBERON:0001137,1.43e-10,6;UBERON:0002420,4.12e-10,8;UBERON:0007245,4.12e-10,8;UBERON:0010009,4.12e-10,8;UBERON:0010011,4.12e-10,8;UBERON:0000454,4.12e-10,8;UBERON:0001948,8.38e-09,5;UBERON:0002315,8.38e-09,5;UBERON:0000483,5.68e-08,174;UBERON:0000119,8.90e-08,176;UBERON:0002950,1.28e-07,4;UBERON:0001891,1.28e-07,4;UBERON:0009616,1.28e-07,4;UBERON:0010286,1.28e-07,4
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,3.80298842103708,0,0,0,0,0.7104801149461,0,0.384218305321555,0.622137673850866,0.405017814995072,0.630974884054146,4.57041575046086,3.3130281142742,0.979926393719632,0.191690942036473,0,7.70811166995721,7.91661496128164,5.9906547969935,1.45074916503213,2.01272815925301,0.52091337055676,9.21303896704557,1.68828783009504,3.20876320331301,6.18720029494702,2.70506193518296,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,9.36898550436951,4.81727425670947,0,0,0,0,7.78911324905078,10.980014467647,2.38743269014442,13.0368240144207,16.6215047264715,8.3115217823824,10.5456820994042,0.101839363850316,0,0,0.420883711772948,0.650602214813519,0.459804208866946,0.900310649026746,0.452114453507145,0.408218994907967,0.896796041993948,0.468508622798644,1.29351685369508,0,0.189106080167819,0.703804496655795,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,2.05809224758569,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,11.8807436590966,7.73597131508541,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.720244376125241,0.646793418913773,0.857348140126369,1.41872186913819,2.85390108163313,0.329098041204242,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.777804753376191,0,0,0,0.13020438484395,0.419437377702843,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2482997506608,14.7304075682297,10.8850147553485,10.6548973053086,10.2762377965596,10.5755145634558,10.1253375034771,14.4102785031751,10.4222754066367,11.39072685854,0.103787347584177,0.798049746802062,0.853668028770671,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.754505365544305,0.280924522409647,0.320125762024346,0.459483751644906,0,0.695305955669133,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.941093804153306,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.77468420592983,0.385813221962283,1.49886346762768,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.695603506861264
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,3.80298842103708,0,0,0,0,0.7104801149461,0,0.384218305321555,0.622137673850866,0.405017814995072,0.630974884054146,4.57041575046086,3.3130281142742,0.979926393719632,0.191690942036473,0,7.70811166995721,7.91661496128164,5.9906547969935,1.45074916503213,2.01272815925301,0.52091337055676,9.21303896704557,1.68828783009504,3.20876320331301,6.18720029494702,2.70506193518296,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,9.36898550436951,4.81727425670947,0,0,0,0,7.78911324905078,10.980014467647,2.38743269014442,13.0368240144207,16.6215047264715,8.3115217823824,10.5456820994042,0.101839363850316,0,0,0.420883711772948,0.650602214813519,0.459804208866946,0.900310649026746,0.452114453507145,0.408218994907967,0.896796041993948,0.468508622798644,1.29351685369508,0,0.189106080167819,0.703804496655795,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,2.05809224758569,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,11.8807436590966,7.73597131508541,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.720244376125241,0.646793418913773,0.857348140126369,1.41872186913819,2.85390108163313,0.329098041204242,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.777804753376191,0,0,0,0.13020438484395,0.419437377702843,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2482997506608,14.7304075682297,10.8850147553485,10.6548973053086,10.2762377965596,10.5755145634558,10.1253375034771,14.4102785031751,10.4222754066367,11.39072685854,0.103787347584177,0.798049746802062,0.853668028770671,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.754505365544305,0.280924522409647,0.320125762024346,0.459483751644906,0,0.695305955669133,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.941093804153306,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.77468420592983,0.385813221962283,1.49886346762768,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.695603506861264
|short_description=p2@Prrt3
|short_description=p2@Prrt3
}}
}}

Revision as of 04:58, 14 November 2012

Short description:p2@Prrt3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prrt3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -57bp_to_ENSMUST00000057429, uc009dgq.1, uc009dgr.1, uc009dgs.1, uc009dgt.1_5end
EntrezGene:Prrt3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Prrt3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.88
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.03e-1623
neuroblast (sensu Vertebrata)5.03e-1623
neuron2.07e-1133
neuronal stem cell2.07e-1133
neuroblast2.07e-1133
electrically signaling cell2.07e-1133
electrically responsive cell4.76e-0939
electrically active cell4.76e-0939
ectodermal cell1.12e-0844
neurectodermal cell1.12e-0844
neural cell7.49e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.70e-4454
central nervous system9.82e-4373
nervous system2.49e-4175
neural tube2.92e-4152
neural rod2.92e-4152
future spinal cord2.92e-4152
neural keel2.92e-4152
ectoderm-derived structure7.60e-3495
ectoderm7.60e-3495
presumptive ectoderm7.60e-3495
neurectoderm1.08e-3364
neural plate1.08e-3364
presumptive neural plate1.08e-3364
brain1.64e-3347
future brain1.64e-3347
regional part of brain5.24e-3246
ecto-epithelium5.56e-3273
gray matter2.29e-3034
anterior neural tube2.61e-2740
regional part of forebrain8.81e-2639
forebrain8.81e-2639
future forebrain8.81e-2639
structure with developmental contribution from neural crest2.00e-2392
brain grey matter4.27e-2329
regional part of telencephalon4.27e-2329
telencephalon4.27e-2329
pre-chordal neural plate1.09e-2249
occipital lobe1.94e-2010
visual cortex1.94e-2010
neocortex1.94e-2010
regional part of cerebral cortex1.22e-1517
cerebral cortex1.94e-1421
cerebral hemisphere1.94e-1421
pallium1.94e-1421
anatomical conduit2.28e-14122
posterior neural tube3.96e-1412
chordal neural plate3.96e-1412
tube6.32e-14114
organ system subdivision1.40e-10194
spinal cord1.43e-106
dorsal region element1.43e-106
dorsum1.43e-106
basal ganglion4.12e-108
nuclear complex of neuraxis4.12e-108
aggregate regional part of brain4.12e-108
collection of basal ganglia4.12e-108
cerebral subcortex4.12e-108
regional part of spinal cord8.38e-095
gray matter of spinal cord8.38e-095
epithelium5.68e-08174
cell layer8.90e-08176
regional part of midbrain1.28e-074
midbrain1.28e-074
presumptive midbrain1.28e-074
midbrain neural tube1.28e-074







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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