FFCP PHASE1:Mm9::chr18:64424861..64424876,+: Difference between revisions
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|id=chr18:64424861..64424876,+ | |id=chr18:64424861..64424876,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.85e-19!23;CL:0000337!2.85e-19!23;CL:0000540!4.29e-16!33;CL:0000047!4.29e-16!33;CL:0000031!4.29e-16!33;CL:0000404!4.29e-16!33;CL:0000393!5.95e-12!39;CL:0000211!5.95e-12!39;CL:0000221!2.13e-11!44;CL:0000133!2.13e-11!44;CL:0002319!3.48e-11!43;CL:0000055!3.43e-08!50 | |ontology_enrichment_celltype=CL:0000117!2.85e-19!23;CL:0000337!2.85e-19!23;CL:0000540!4.29e-16!33;CL:0000047!4.29e-16!33;CL:0000031!4.29e-16!33;CL:0000404!4.29e-16!33;CL:0000393!5.95e-12!39;CL:0000211!5.95e-12!39;CL:0000221!2.13e-11!44;CL:0000133!2.13e-11!44;CL:0002319!3.48e-11!43;CL:0000055!3.43e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.51e-32,23;CL:0000337,7.51e-32,23;CL:0000540,1.85e-20,33;CL:0000047,1.85e-20,33;CL:0000031,1.85e-20,33;CL:0000404,1.85e-20,33;CL:0000393,1.91e-16,39;CL:0000211,1.91e-16,39;CL:0002319,2.11e-14,43;CL:0000221,5.99e-14,44;CL:0000133,5.99e-14,44;CL:0002612,2.13e-07,3;CL:0002609,5.31e-07,6;CL:0002321,7.81e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.35e-32!75;UBERON:0001016!1.35e-32!75;UBERON:0001017!3.22e-32!73;UBERON:0005743!3.22e-32!73;UBERON:0001049!1.92e-31!52;UBERON:0005068!1.92e-31!52;UBERON:0006241!1.92e-31!52;UBERON:0007135!1.92e-31!52;UBERON:0002346!2.32e-31!71;UBERON:0003075!2.32e-31!71;UBERON:0007284!2.32e-31!71;UBERON:0000033!2.00e-30!63;UBERON:0004121!3.09e-30!102;UBERON:0000924!3.09e-30!102;UBERON:0006601!3.09e-30!102;UBERON:0000955!8.80e-29!50;UBERON:0006238!8.80e-29!50;UBERON:0002616!5.04e-28!49;UBERON:0003056!5.48e-27!49;UBERON:0002020!1.46e-25!34;UBERON:0003080!1.02e-24!40;UBERON:0002780!6.35e-24!39;UBERON:0001890!6.35e-24!39;UBERON:0006240!6.35e-24!39;UBERON:0002791!1.45e-20!29;UBERON:0003528!1.45e-20!29;UBERON:0001893!1.45e-20!29;UBERON:0007811!9.37e-17!86;UBERON:0000956!2.55e-14!21;UBERON:0001869!2.55e-14!21;UBERON:0000203!2.55e-14!21;UBERON:0000153!1.07e-13!94;UBERON:0002619!2.32e-11!17;UBERON:0002021!3.53e-10!10;UBERON:0000411!3.53e-10!10;UBERON:0001950!3.53e-10!10;UBERON:0002420!1.91e-07!8;UBERON:0007245!1.91e-07!8;UBERON:0010009!1.91e-07!8;UBERON:0010011!1.91e-07!8;UBERON:0000454!1.91e-07!8;UBERON:0003076!4.17e-07!12;UBERON:0003057!4.17e-07!12;UBERON:0002240!6.35e-07!6;UBERON:0005174!6.35e-07!6;UBERON:0001137!6.35e-07!6;UBERON:0000025!7.17e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!1.35e-32!75;UBERON:0001016!1.35e-32!75;UBERON:0001017!3.22e-32!73;UBERON:0005743!3.22e-32!73;UBERON:0001049!1.92e-31!52;UBERON:0005068!1.92e-31!52;UBERON:0006241!1.92e-31!52;UBERON:0007135!1.92e-31!52;UBERON:0002346!2.32e-31!71;UBERON:0003075!2.32e-31!71;UBERON:0007284!2.32e-31!71;UBERON:0000033!2.00e-30!63;UBERON:0004121!3.09e-30!102;UBERON:0000924!3.09e-30!102;UBERON:0006601!3.09e-30!102;UBERON:0000955!8.80e-29!50;UBERON:0006238!8.80e-29!50;UBERON:0002616!5.04e-28!49;UBERON:0003056!5.48e-27!49;UBERON:0002020!1.46e-25!34;UBERON:0003080!1.02e-24!40;UBERON:0002780!6.35e-24!39;UBERON:0001890!6.35e-24!39;UBERON:0006240!6.35e-24!39;UBERON:0002791!1.45e-20!29;UBERON:0003528!1.45e-20!29;UBERON:0001893!1.45e-20!29;UBERON:0007811!9.37e-17!86;UBERON:0000956!2.55e-14!21;UBERON:0001869!2.55e-14!21;UBERON:0000203!2.55e-14!21;UBERON:0000153!1.07e-13!94;UBERON:0002619!2.32e-11!17;UBERON:0002021!3.53e-10!10;UBERON:0000411!3.53e-10!10;UBERON:0001950!3.53e-10!10;UBERON:0002420!1.91e-07!8;UBERON:0007245!1.91e-07!8;UBERON:0010009!1.91e-07!8;UBERON:0010011!1.91e-07!8;UBERON:0000454!1.91e-07!8;UBERON:0003076!4.17e-07!12;UBERON:0003057!4.17e-07!12;UBERON:0002240!6.35e-07!6;UBERON:0005174!6.35e-07!6;UBERON:0001137!6.35e-07!6;UBERON:0000025!7.17e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-48,54;UBERON:0002020,5.23e-46,34;UBERON:0001049,2.12e-45,52;UBERON:0005068,2.12e-45,52;UBERON:0006241,2.12e-45,52;UBERON:0007135,2.12e-45,52;UBERON:0001017,2.71e-44,73;UBERON:0001016,7.68e-43,75;UBERON:0002346,4.61e-37,64;UBERON:0003075,4.61e-37,64;UBERON:0007284,4.61e-37,64;UBERON:0003528,4.78e-36,29;UBERON:0002791,4.78e-36,29;UBERON:0001893,4.78e-36,29;UBERON:0000955,5.91e-36,47;UBERON:0006238,5.91e-36,47;UBERON:0002616,1.42e-34,46;UBERON:0003080,1.66e-33,40;UBERON:0004121,2.93e-33,95;UBERON:0000924,2.93e-33,95;UBERON:0006601,2.93e-33,95;UBERON:0002780,5.02e-32,39;UBERON:0001890,5.02e-32,39;UBERON:0006240,5.02e-32,39;UBERON:0010371,2.61e-31,73;UBERON:0003056,8.60e-28,49;UBERON:0000956,7.32e-26,21;UBERON:0001869,7.32e-26,21;UBERON:0000203,7.32e-26,21;UBERON:0010314,7.36e-23,92;UBERON:0002619,6.31e-20,17;UBERON:0002021,6.14e-19,10;UBERON:0000411,6.14e-19,10;UBERON:0001950,6.14e-19,10;UBERON:0000025,1.45e-15,114;UBERON:0004111,6.25e-14,122;UBERON:0002240,2.18e-12,6;UBERON:0005174,2.18e-12,6;UBERON:0001137,2.18e-12,6;UBERON:0003076,1.53e-11,12;UBERON:0003057,1.53e-11,12;UBERON:0001948,4.76e-11,5;UBERON:0002315,4.76e-11,5;UBERON:0002420,5.40e-11,8;UBERON:0007245,5.40e-11,8;UBERON:0010009,5.40e-11,8;UBERON:0010011,5.40e-11,8;UBERON:0000454,5.40e-11,8;UBERON:0011216,3.38e-10,194;UBERON:0000369,7.35e-10,5;UBERON:0002435,7.35e-10,5;UBERON:0000204,7.35e-10,5;UBERON:0010082,7.35e-10,5;UBERON:0000483,1.27e-07,174;UBERON:0000119,1.97e-07,176;UBERON:0002257,2.13e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,1.76272340924412,2.29510095163874,1.26194976810829,4.57041575046086,3.09215957332259,2.20483438586917,1.72521847832825,0.919218786610021,2.20231761998777,2.042997409363,2.15049146558741,3.82470234417562,3.7509933876988,1.04182674111352,0.558365998002762,2.25105044012672,1.83357897332172,5.00868595305235,4.8406371471695,3.72798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,2.09706895166752,3.66000482254901,2.63874139437015,2.9550134432687,2.55715457330331,1.87009240103604,1.46017136760982,0,0,0,0.210441855886474,0.780722657776222,0,1.0803727788321,0.150704817835715,0.816437989815934,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,2.77842453424068,0,0,0.213288250535234,0.928946687441754,0.644337306610467,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.667380422864376,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.28932855251423,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0.584511715822624,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38307724027652,0.18006109403131,0.129358683782755,0,0.532020700926821,0.891844088010353,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.627264888043406,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.68260189205742,4.58316410751517,7.38968684077857,1.37016503954128,2.2661816921691,2.70009000092722,2.70192721934532,3.17199686288943,3.10656187051092,0.726511433089237,0,0.682934423016537,0.972426868273176,0.209613162627982,0.367687016900028,1.33348036680969,0.824140228955577,0,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.512201219238954,0.631790158511746,0.476293691283074,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.73171189149109,1.31534855718921,0.135804113845862,0,0.474540072496697,0.394017929502254,0,0.309873682371932,0,1.24905288968973,0.701794825336225,0.214871054048298,0,0,0 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,1.76272340924412,2.29510095163874,1.26194976810829,4.57041575046086,3.09215957332259,2.20483438586917,1.72521847832825,0.919218786610021,2.20231761998777,2.042997409363,2.15049146558741,3.82470234417562,3.7509933876988,1.04182674111352,0.558365998002762,2.25105044012672,1.83357897332172,5.00868595305235,4.8406371471695,3.72798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,2.09706895166752,3.66000482254901,2.63874139437015,2.9550134432687,2.55715457330331,1.87009240103604,1.46017136760982,0,0,0,0.210441855886474,0.780722657776222,0,1.0803727788321,0.150704817835715,0.816437989815934,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,2.77842453424068,0,0,0.213288250535234,0.928946687441754,0.644337306610467,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.667380422864376,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.28932855251423,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0.584511715822624,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38307724027652,0.18006109403131,0.129358683782755,0,0.532020700926821,0.891844088010353,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.627264888043406,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.68260189205742,4.58316410751517,7.38968684077857,1.37016503954128,2.2661816921691,2.70009000092722,2.70192721934532,3.17199686288943,3.10656187051092,0.726511433089237,0,0.682934423016537,0.972426868273176,0.209613162627982,0.367687016900028,1.33348036680969,0.824140228955577,0,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.512201219238954,0.631790158511746,0.476293691283074,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.73171189149109,1.31534855718921,0.135804113845862,0,0.474540072496697,0.394017929502254,0,0.309873682371932,0,1.24905288968973,0.701794825336225,0.214871054048298,0,0,0 | ||
|short_description=p@chr18:64424861..64424876,+ | |short_description=p@chr18:64424861..64424876,+ | ||
}} | }} |
Revision as of 16:39, 14 November 2012
Short description: | p@chr18:64424861..64424876, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:64424861..64424876, + |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.51e-32 | 23 |
neuroblast (sensu Vertebrata) | 7.51e-32 | 23 |
neuron | 1.85e-20 | 33 |
neuronal stem cell | 1.85e-20 | 33 |
neuroblast | 1.85e-20 | 33 |
electrically signaling cell | 1.85e-20 | 33 |
electrically responsive cell | 1.91e-16 | 39 |
electrically active cell | 1.91e-16 | 39 |
neural cell | 2.11e-14 | 43 |
ectodermal cell | 5.99e-14 | 44 |
neurectodermal cell | 5.99e-14 | 44 |
neuron of the ventral spinal cord | 2.13e-07 | 3 |
neuron of cerebral cortex | 5.31e-07 | 6 |
embryonic cell | 7.81e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.