FFCP PHASE1:Hg19::chr11:121323108..121323117,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11185 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=19bp_to_ENST00000532451_5end | |||
|coexpression_cluster_id=C3100 | |||
|description=CAGE_peak_8_at_SORL1_5end | |||
|id=chr11:121323108..121323117,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.58e-13!52;CL:0000542!5.32e-13!53;CL:0000051!5.32e-13!53;CL:0000791!1.19e-11!18;CL:0000789!1.19e-11!18;CL:0002420!1.19e-11!18;CL:0002419!1.19e-11!18;CL:0000790!1.19e-11!18;CL:0000738!1.19e-10!140;CL:0002087!1.45e-09!119;CL:0000625!4.67e-09!11;CL:0000037!4.83e-08!172;CL:0000566!4.83e-08!172;CL:0000084!1.55e-07!25;CL:0000827!1.55e-07!25;CL:0002031!4.71e-07!124;CL:0002032!5.93e-07!165;CL:0000837!5.93e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-17;18!CL:0000789;1.33e-17;18!CL:0002419;1.33e-17;18!CL:0000084;6.22e-13;25!CL:0000625;1.32e-12;11!CL:0000094;1.27e-10;8!CL:0000624;6.39e-08;6!CL:0000542;2.63e-07;53!CL:0000081;2.65e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.02e-18,18;CL:0000789,4.02e-18,18;CL:0002420,4.02e-18,18;CL:0002419,4.02e-18,18;CL:0000790,4.02e-18,18;CL:0000838,2.59e-13,52;CL:0000084,3.05e-13,25;CL:0000827,3.05e-13,25;CL:0000542,6.42e-13,53;CL:0000051,6.42e-13,53;CL:0000625,8.56e-13,11;CL:0000094,1.03e-10,8;CL:0000047,1.64e-08,8;CL:0000624,2.68e-08,6;CL:0000081,2.30e-07,11;CL:0000738,2.52e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-17;18!UBERON:0006601;2.50e-09;82!CL:0000051;2.63e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;6.60e-27;53!UBERON:0002616;6.60e-27;53!UBERON:0002619;5.34e-26;22!UBERON:0002780;2.23e-24;41!UBERON:0001890;2.23e-24;41!UBERON:0001950;1.91e-23;20!UBERON:0001893;6.13e-23;34!UBERON:0003528;2.30e-22;34!UBERON:0002020;2.30e-22;34!UBERON:0000956;3.32e-22;25!UBERON:0000203;3.32e-22;25!UBERON:0001869;3.68e-21;32!UBERON:0002791;3.70e-21;32!UBERON:0001017;1.12e-15;75!UBERON:0000955;4.87e-15;68!UBERON:0001016;5.67e-14;83!UBERON:0004732;3.14e-12;13!UBERON:0004733;4.31e-11;12!UBERON:0002028;4.31e-11;12!UBERON:0002298;1.10e-10;6!UBERON:0000178;3.04e-10;15!UBERON:0000179;3.04e-10;15!UBERON:0000463;3.04e-10;15!UBERON:0001894;6.43e-10;7!UBERON:0000200;2.69e-09;6!UBERON:0007023;2.88e-09;114!UBERON:0002021;2.44e-08;5!UBERON:0000349;2.78e-08;5!UBERON:0001872;3.85e-08;5!UBERON:0002680;4.67e-07;9!UBERON:0001895;4.67e-07;9 | |||
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| |||
|short_description=p8@SORL1 | |||
}} |
Revision as of 16:14, 10 September 2013
Short description: | p8@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SORL1_5end |
Coexpression cluster: | C3100_Neutrophils_occipital_Eosinophils_CD4_temporal_pineal_parietal |
Association with transcript: | 19bp_to_ENST00000532451_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.02e-18 | 18 |
alpha-beta T cell | 4.02e-18 | 18 |
immature T cell | 4.02e-18 | 18 |
mature T cell | 4.02e-18 | 18 |
immature alpha-beta T cell | 4.02e-18 | 18 |
lymphoid lineage restricted progenitor cell | 2.59e-13 | 52 |
T cell | 3.05e-13 | 25 |
pro-T cell | 3.05e-13 | 25 |
lymphocyte | 6.42e-13 | 53 |
common lymphoid progenitor | 6.42e-13 | 53 |
CD8-positive, alpha-beta T cell | 8.56e-13 | 11 |
granulocyte | 1.03e-10 | 8 |
neuronal stem cell | 1.64e-08 | 8 |
CD4-positive, alpha-beta T cell | 2.68e-08 | 6 |
blood cell | 2.30e-07 | 11 |
leukocyte | 2.52e-07 | 136 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.