FFCP PHASE1:Hg19::chr17:74163159..74163190,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114804|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29402|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_BC042501_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_RNF157_5end|id=chr17:74163159..74163190,-|ontology_enrichment_celltype=CL:0000148!4.53e-09!10;CL:0000541!4.53e-09!10|ontology_enrichment_celltype_v019=CL:0000047;4.03e-11;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;1.47e-16;3!UBERON:0003057;1.47e-16;3!UBERON:0006601;1.07e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.70e-11;2|ontology_enrichment_disease_v019_2=DOID:1909,1.42e-11,2|ontology_enrichment_uberon=UBERON:0001049!1.02e-51!57;UBERON:0005068!1.02e-51!57;UBERON:0006241!1.02e-51!57;UBERON:0007135!1.02e-51!57;UBERON:0001017!1.60e-47!82;UBERON:0005743!8.92e-47!86;UBERON:0007023!1.64e-43!115;UBERON:0000073!8.40e-43!94;UBERON:0001016!8.40e-43!94;UBERON:0002616!2.52e-41!59;UBERON:0002780!2.69e-41!41;UBERON:0001890!2.69e-41!41;UBERON:0006240!2.69e-41!41;UBERON:0002020!2.93e-41!34;UBERON:0003528!2.93e-41!34;UBERON:0001893!3.18e-41!34;UBERON:0000955!4.65e-41!69;UBERON:0006238!4.65e-41!69;UBERON:0002346!2.07e-40!90;UBERON:0003080!4.24e-40!42;UBERON:0002791!2.15e-39!33;UBERON:0003075!4.18e-39!86;UBERON:0007284!4.18e-39!86;UBERON:0001869!7.93e-38!32;UBERON:0003056!2.28e-28!61;UBERON:0002619!1.05e-26!22;UBERON:0000924!1.32e-26!173;UBERON:0006601!1.32e-26!173;UBERON:0000956!1.30e-25!25;UBERON:0000203!1.30e-25!25;UBERON:0004121!2.54e-25!169;UBERON:0000153!1.32e-24!129;UBERON:0007811!1.32e-24!129;UBERON:0000033!6.51e-24!123;UBERON:0001950!7.11e-23!20;UBERON:0002308!6.84e-18!9;UBERON:0000125!6.84e-18!9;UBERON:0002420!1.06e-17!9;UBERON:0007245!1.06e-17!9;UBERON:0010009!1.06e-17!9;UBERON:0010011!1.06e-17!9;UBERON:0000454!1.06e-17!9;UBERON:0009663!3.46e-14!7;UBERON:0003076!2.10e-12!15;UBERON:0003057!2.10e-12!15;UBERON:0000349!2.67e-11!5;UBERON:0000025!4.74e-10!194;UBERON:0001871!1.33e-09!7;UBERON:0000200!1.55e-09!6;UBERON:0002298!4.63e-09!8;UBERON:0000369!5.13e-09!4;UBERON:0002435!5.13e-09!4;UBERON:0000204!5.13e-09!4;UBERON:0010082!5.13e-09!4;UBERON:0004111!1.78e-08!241;UBERON:0000064!5.88e-08!219;UBERON:0002771!9.65e-08!3;UBERON:0002240!1.28e-07!3;UBERON:0004733!1.35e-07!12;UBERON:0002028!1.35e-07!12;UBERON:0007277!1.35e-07!12;UBERON:0001872!2.46e-07!5;UBERON:0000988!4.31e-07!3;UBERON:0005383!5.18e-07!3;UBERON:0005382!5.18e-07!3;UBERON:0006331!5.51e-07!3;UBERON:0004732!6.40e-07!13;UBERON:0002021!8.10e-07!5;UBERON:0000475!8.52e-07!365|ontology_enrichment_uberon_v019=UBERON:0003528;7.78e-38;34!UBERON:0002020;7.78e-38;34!UBERON:0001893;8.80e-37;34!UBERON:0002619;2.77e-35;22!UBERON:0001869;7.22e-34;32!UBERON:0002791;4.06e-31;32!UBERON:0000956;6.73e-31;25!UBERON:0000203;6.73e-31;25!UBERON:0002780;5.71e-28;41!UBERON:0001890;5.71e-28;41!UBERON:0001950;1.45e-27;20!UBERON:0000073;9.35e-24;53!UBERON:0002616;9.35e-24;53!UBERON:0000200;1.19e-21;6!UBERON:0001017;1.86e-19;75!UBERON:0002240;1.47e-16;3!UBERON:0005174;1.47e-16;3!UBERON:0001137;1.47e-16;3!UBERON:0001016;4.48e-16;83!UBERON:0000955;2.56e-15;68!UBERON:0000125;6.50e-14;9!UBERON:0002308;6.50e-14;9!UBERON:0001954;1.24e-11;2!UBERON:0003022;1.24e-11;2!UBERON:0002421;1.24e-11;2!UBERON:0002600;1.24e-11;2!UBERON:0002771;1.34e-11;2!UBERON:0001897;4.03e-11;2!UBERON:0002148;4.03e-11;2!UBERON:0006331;4.03e-11;2!UBERON:0009662;4.03e-11;2!UBERON:0010225;4.03e-11;2!UBERON:0000349;5.42e-10;5!UBERON:0007023;6.43e-10;114!UBERON:0001872;1.08e-09;5!UBERON:0011216;2.44e-08;132!UBERON:0002298;2.47e-08;6!UBERON:0001870;3.42e-08;3!UBERON:0000988;1.07e-07;3!UBERON:0001871;3.03e-07;6!UBERON:0009663;4.74e-07;7!UBERON:0003112;9.13e-07;1!UBERON:0011158;9.13e-07;1!UBERON:0003128;9.13e-07;1!UBERON:0001703;9.13e-07;1!UBERON:0002241;9.13e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.97e-55,56;UBERON:0005068,1.97e-55,56;UBERON:0006241,1.97e-55,56;UBERON:0007135,1.97e-55,56;UBERON:0001017,5.15e-46,81;UBERON:0000073,3.26e-45,53;UBERON:0002616,3.26e-45,53;UBERON:0002780,1.62e-44,41;UBERON:0001890,1.62e-44,41;UBERON:0003080,1.62e-44,41;UBERON:0006240,1.62e-44,41;UBERON:0003528,8.17e-44,34;UBERON:0002020,8.17e-44,34;UBERON:0001893,9.32e-44,34;UBERON:0001869,1.27e-41,32;UBERON:0001016,6.45e-41,89;UBERON:0000955,5.28e-37,68;UBERON:0006238,5.28e-37,68;UBERON:0002791,8.38e-37,32;UBERON:0003075,2.68e-36,82;UBERON:0007284,2.68e-36,82;UBERON:0002619,1.02e-35,22;UBERON:0010371,3.06e-35,104;UBERON:0002346,2.28e-34,86;UBERON:0000956,2.80e-31,25;UBERON:0000203,2.80e-31,25;UBERON:0007023,1.34e-29,114;UBERON:0003056,1.04e-28,61;UBERON:0001950,8.09e-28,20;UBERON:0004121,7.31e-24,171;UBERON:0000924,7.31e-24,171;UBERON:0006601,7.31e-24,171;UBERON:0010314,1.87e-22,132;UBERON:0000200,9.69e-22,6;UBERON:0002240,1.97e-16,3;UBERON:0005174,1.97e-16,3;UBERON:0001137,1.97e-16,3;UBERON:0011216,3.70e-14,223;UBERON:0000125,7.41e-14,9;UBERON:0002308,7.41e-14,9;UBERON:0000025,2.18e-12,192;UBERON:0001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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114804 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29402 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC042501_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_RNF157_5end | |||
|id=chr17:74163159..74163190,- | |||
|ontology_enrichment_celltype=CL:0000148!4.53e-09!10;CL:0000541!4.53e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.03e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.47e-16;3!UBERON:0003057;1.47e-16;3!UBERON:0006601;1.07e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.42e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-51!57;UBERON:0005068!1.02e-51!57;UBERON:0006241!1.02e-51!57;UBERON:0007135!1.02e-51!57;UBERON:0001017!1.60e-47!82;UBERON:0005743!8.92e-47!86;UBERON:0007023!1.64e-43!115;UBERON:0000073!8.40e-43!94;UBERON:0001016!8.40e-43!94;UBERON:0002616!2.52e-41!59;UBERON:0002780!2.69e-41!41;UBERON:0001890!2.69e-41!41;UBERON:0006240!2.69e-41!41;UBERON:0002020!2.93e-41!34;UBERON:0003528!2.93e-41!34;UBERON:0001893!3.18e-41!34;UBERON:0000955!4.65e-41!69;UBERON:0006238!4.65e-41!69;UBERON:0002346!2.07e-40!90;UBERON:0003080!4.24e-40!42;UBERON:0002791!2.15e-39!33;UBERON:0003075!4.18e-39!86;UBERON:0007284!4.18e-39!86;UBERON:0001869!7.93e-38!32;UBERON:0003056!2.28e-28!61;UBERON:0002619!1.05e-26!22;UBERON:0000924!1.32e-26!173;UBERON:0006601!1.32e-26!173;UBERON:0000956!1.30e-25!25;UBERON:0000203!1.30e-25!25;UBERON:0004121!2.54e-25!169;UBERON:0000153!1.32e-24!129;UBERON:0007811!1.32e-24!129;UBERON:0000033!6.51e-24!123;UBERON:0001950!7.11e-23!20;UBERON:0002308!6.84e-18!9;UBERON:0000125!6.84e-18!9;UBERON:0002420!1.06e-17!9;UBERON:0007245!1.06e-17!9;UBERON:0010009!1.06e-17!9;UBERON:0010011!1.06e-17!9;UBERON:0000454!1.06e-17!9;UBERON:0009663!3.46e-14!7;UBERON:0003076!2.10e-12!15;UBERON:0003057!2.10e-12!15;UBERON:0000349!2.67e-11!5;UBERON:0000025!4.74e-10!194;UBERON:0001871!1.33e-09!7;UBERON:0000200!1.55e-09!6;UBERON:0002298!4.63e-09!8;UBERON:0000369!5.13e-09!4;UBERON:0002435!5.13e-09!4;UBERON:0000204!5.13e-09!4;UBERON:0010082!5.13e-09!4;UBERON:0004111!1.78e-08!241;UBERON:0000064!5.88e-08!219;UBERON:0002771!9.65e-08!3;UBERON:0002240!1.28e-07!3;UBERON:0004733!1.35e-07!12;UBERON:0002028!1.35e-07!12;UBERON:0007277!1.35e-07!12;UBERON:0001872!2.46e-07!5;UBERON:0000988!4.31e-07!3;UBERON:0005383!5.18e-07!3;UBERON:0005382!5.18e-07!3;UBERON:0006331!5.51e-07!3;UBERON:0004732!6.40e-07!13;UBERON:0002021!8.10e-07!5;UBERON:0000475!8.52e-07!365 | |||
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|short_description=p3@RNF157 | |||
}} |
Revision as of 15:46, 11 September 2013
Short description: | p3@RNF157 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RNF157_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_BC042501_5end |
EntrezGene: | RNF157 |
HGNC: | 29402 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 1.42e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.