FFCP PHASE1:Mm9::chr16:20621282..20621302,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=73047|HGNC=|MCL_coexpression_id=20|UniProt=B2RXL5,Q78WH7|association_with_transcript=48bp_to_NM_028420,uc007yqk.2_5end|description=CAGE_peak_6_at_Camk2n2_5end|id=chr16:20621282..20621302,-|ontology_enrichment_celltype=CL:0000221!2.35e-12!44;CL:0000133!2.35e-12!44;CL:0002319!2.63e-12!43;CL:0000117!4.40e-12!23;CL:0000337!4.40e-12!23;CL:0000540!1.39e-10!33;CL:0000047!1.39e-10!33;CL:0000031!1.39e-10!33;CL:0000404!1.39e-10!33;CL:0000055!1.62e-08!50;CL:0000393!3.49e-07!39;CL:0000211!3.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-18,23;CL:0000337,5.92e-18,23;CL:0002319,3.95e-12,43;CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0000540,4.70e-11,33;CL:0000047,4.70e-11,33;CL:0000031,4.70e-11,33;CL:0000404,4.70e-11,33;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!75;UBERON:0001016!1.99e-26!75;UBERON:0001017!5.69e-26!73;UBERON:0005743!5.69e-26!73;UBERON:0002346!6.04e-25!71;UBERON:0003075!6.04e-25!71;UBERON:0007284!6.04e-25!71;UBERON:0004121!1.43e-24!102;UBERON:0000924!1.43e-24!102;UBERON:0006601!1.43e-24!102;UBERON:0001049!9.68e-22!52;UBERON:0005068!9.68e-22!52;UBERON:0006241!9.68e-22!52;UBERON:0007135!9.68e-22!52;UBERON:0000033!2.20e-20!63;UBERON:0000955!2.85e-20!50;UBERON:0006238!2.85e-20!50;UBERON:0002616!1.21e-19!49;UBERON:0003056!9.38e-17!49;UBERON:0002020!1.23e-16!34;UBERON:0003080!1.63e-14!40;UBERON:0002780!8.81e-14!39;UBERON:0001890!8.81e-14!39;UBERON:0006240!8.81e-14!39;UBERON:0002791!4.20e-13!29;UBERON:0003528!4.20e-13!29;UBERON:0001893!4.20e-13!29;UBERON:0007811!5.04e-10!86;UBERON:0003076!3.64e-08!12;UBERON:0003057!3.64e-08!12;UBERON:0000153!3.79e-08!94;UBERON:0000956!4.82e-08!21;UBERON:0001869!4.82e-08!21;UBERON:0000203!4.82e-08!21;UBERON:0002619!4.11e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-44,54;UBERON:0001017,4.68e-41,73;UBERON:0001049,1.01e-40,52;UBERON:0005068,1.01e-40,52;UBERON:0006241,1.01e-40,52;UBERON:0007135,1.01e-40,52;UBERON:0001016,1.23e-39,75;UBERON:0002346,1.05e-32,64;UBERON:0003075,1.05e-32,64;UBERON:0007284,1.05e-32,64;UBERON:0000955,1.06e-32,47;UBERON:0006238,1.06e-32,47;UBERON:0002616,2.01e-31,46;UBERON:0004121,4.30e-30,95;UBERON:0000924,4.30e-30,95;UBERON:0006601,4.30e-30,95;UBERON:0002020,2.00e-28,34;UBERON:0010371,2.58e-27,73;UBERON:0003080,7.08e-25,40;UBERON:0002780,2.22e-23,39;UBERON:0001890,2.22e-23,39;UBERON:0006240,2.22e-23,39;UBERON:0003528,3.65e-21,29;UBERON:0002791,3.65e-21,29;UBERON:0001893,3.65e-21,29;UBERON:0010314,1.22e-20,92;UBERON:0003056,2.81e-20,49;UBERON:0003076,1.02e-16,12;UBERON:0003057,1.02e-16,12;UBERON:0000025,9.07e-13,114;UBERON:0002420,1.13e-12,8;UBERON:0007245,1.13e-12,8;UBERON:0010009,1.13e-12,8;UBERON:0010011,1.13e-12,8;UBERON:0000454,1.13e-12,8;UBERON:0002619,2.12e-12,17;UBERON:0004111,5.06e-12,122;UBERON:0002021,2.94e-11,10;UBERON:0000411,2.94e-11,10;UBERON:0001950,2.94e-11,10;UBERON:0000956,4.56e-11,21;UBERON:0001869,4.56e-11,21;UBERON:0000203,4.56e-11,21;UBERON:0002240,1.06e-10,6;UBERON:0005174,1.06e-10,6;UBERON:0001137,1.06e-10,6;UBERON:0001948,5.37e-09,5;UBERON:0002315,5.37e-09,5;UBERON:0000369,4.33e-08,5;UBERON:0002435,4.33e-08,5;UBERON:0000204,4.33e-08,5;UBERON:0010082,4.33e-08,5;UBERON:0011216,6.45e-08,194;UBERON:0002950,7.76e-08,4;UBERON:0001891,7.76e-08,4;UBERON:0009616,7.76e-08,4;UBERON:0010286,7.76e-08,4;UBERON:0004733,1.13e-07,6;UBERON:0004732,1.13e-07,6;UBERON:0002028,1.13e-07,6;UBERON:0007277,1.13e-07,6|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,2.63623419281366,2.13872888981712,0.699932108126813,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,2.53532561402472,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,0.384218305321555,0.207379224616955,0.540023753326763,0.630974884054146,12.8542942981712,10.8225585066291,0.244981598429908,0.670918297127655,0,14.3150645299205,18.5146640223522,12.7493422602682,3.69281605644543,5.39777097254217,5.73004707612436,12.8424179540635,9.00420176050688,8.55670187550137,8.83885756421003,7.54569908235246,3.91438836233131,0.302904773332736,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,0.561777680527007,2.04516387093669,1.55871602761721,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0,0.304465478312141,0.691846491768175,0.60289056221049,0.940709657085638,0,0,0.289198713839823,0,0,0,0.484875253135222,0,7.61230072230023,13.4045892360611,0.255457055208591,0,0,0.127070227073065,13.481157546434,7.32000964509802,1.50785222535437,2.08589184230732,2.81287003063364,19.5320761885986,11.0324058886075,0.101839363850316,0.124406970610093,0,0.631325567659422,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,1.03481348295606,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,1.47202963994889,1.74937841044784,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,15.0917554588524,11.4867452860359,1.3114795630134,0,0.315508219416257,0.390438744296638,0.430846795465598,0.955875191810208,0.222798674082394,0,0,0.584511715822624,0.395287777946524,2.57057053137446,0.567760340833074,0.35613120733451,0,0,0,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,0,1.70219802876894,0.18006109403131,0,0,0,0.356737635204141,1.48094118541909,9.13394847343798,0.23467170806371,0,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0,16.3174265769249,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,1.00314420807073,3.95326289831947,3.68260189205742,4.01026859407578,2.23409137046794,1.37016503954128,3.0215755895588,0,2.2516060161211,4.53142408984205,3.10656187051092,0.415149390336707,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0,0.758091635291392,0.50695859978048,0.565879024158229,0.37456602987953,0.640251524048693,0.459483751644906,0.952587382566147,1.0429589335037,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.470546902076653,0.338458431566706,0.548783918618318,1.05227884575137,0.407412341537585,0,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.701794825336225,1.50409737833809,0.956441660344217,0.441182838239031,0.463735671240843|short_description=p6@Camk2n2}} | ||
|EntrezGene=73047 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=B2RXL5,Q78WH7 | |||
|association_with_transcript=48bp_to_NM_028420,uc007yqk.2_5end | |||
|description=CAGE_peak_6_at_Camk2n2_5end | |||
|id=chr16:20621282..20621302,- | |||
|ontology_enrichment_celltype=CL:0000221!2.35e-12!44;CL:0000133!2.35e-12!44;CL:0002319!2.63e-12!43;CL:0000117!4.40e-12!23;CL:0000337!4.40e-12!23;CL:0000540!1.39e-10!33;CL:0000047!1.39e-10!33;CL:0000031!1.39e-10!33;CL:0000404!1.39e-10!33;CL:0000055!1.62e-08!50;CL:0000393!3.49e-07!39;CL:0000211!3.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-18,23;CL:0000337,5.92e-18,23;CL:0002319,3.95e-12,43;CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0000540,4.70e-11,33;CL:0000047,4.70e-11,33;CL:0000031,4.70e-11,33;CL:0000404,4.70e-11,33;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!75;UBERON:0001016!1.99e-26!75;UBERON:0001017!5.69e-26!73;UBERON:0005743!5.69e-26!73;UBERON:0002346!6.04e-25!71;UBERON:0003075!6.04e-25!71;UBERON:0007284!6.04e-25!71;UBERON:0004121!1.43e-24!102;UBERON:0000924!1.43e-24!102;UBERON:0006601!1.43e-24!102;UBERON:0001049!9.68e-22!52;UBERON:0005068!9.68e-22!52;UBERON:0006241!9.68e-22!52;UBERON:0007135!9.68e-22!52;UBERON:0000033!2.20e-20!63;UBERON:0000955!2.85e-20!50;UBERON:0006238!2.85e-20!50;UBERON:0002616!1.21e-19!49;UBERON:0003056!9.38e-17!49;UBERON:0002020!1.23e-16!34;UBERON:0003080!1.63e-14!40;UBERON:0002780!8.81e-14!39;UBERON:0001890!8.81e-14!39;UBERON:0006240!8.81e-14!39;UBERON:0002791!4.20e-13!29;UBERON:0003528!4.20e-13!29;UBERON:0001893!4.20e-13!29;UBERON:0007811!5.04e-10!86;UBERON:0003076!3.64e-08!12;UBERON:0003057!3.64e-08!12;UBERON:0000153!3.79e-08!94;UBERON:0000956!4.82e-08!21;UBERON:0001869!4.82e-08!21;UBERON:0000203!4.82e-08!21;UBERON:0002619!4.11e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-44,54;UBERON:0001017,4.68e-41,73;UBERON:0001049,1.01e-40,52;UBERON:0005068,1.01e-40,52;UBERON:0006241,1.01e-40,52;UBERON:0007135,1.01e-40,52;UBERON:0001016,1.23e-39,75;UBERON:0002346,1.05e-32,64;UBERON:0003075,1.05e-32,64;UBERON:0007284,1.05e-32,64;UBERON:0000955,1.06e-32,47;UBERON:0006238,1.06e-32,47;UBERON:0002616,2.01e-31,46;UBERON:0004121,4.30e-30,95;UBERON:0000924,4.30e-30,95;UBERON:0006601,4.30e-30,95;UBERON:0002020,2.00e-28,34;UBERON:0010371,2.58e-27,73;UBERON:0003080,7.08e-25,40;UBERON:0002780,2.22e-23,39;UBERON:0001890,2.22e-23,39;UBERON:0006240,2.22e-23,39;UBERON:0003528,3.65e-21,29;UBERON:0002791,3.65e-21,29;UBERON:0001893,3.65e-21,29;UBERON:0010314,1.22e-20,92;UBERON:0003056,2.81e-20,49;UBERON:0003076,1.02e-16,12;UBERON:0003057,1.02e-16,12;UBERON:0000025,9.07e-13,114;UBERON:0002420,1.13e-12,8;UBERON:0007245,1.13e-12,8;UBERON:0010009,1.13e-12,8;UBERON:0010011,1.13e-12,8;UBERON:0000454,1.13e-12,8;UBERON:0002619,2.12e-12,17;UBERON:0004111,5.06e-12,122;UBERON:0002021,2.94e-11,10;UBERON:0000411,2.94e-11,10;UBERON:0001950,2.94e-11,10;UBERON:0000956,4.56e-11,21;UBERON:0001869,4.56e-11,21;UBERON:0000203,4.56e-11,21;UBERON:0002240,1.06e-10,6;UBERON:0005174,1.06e-10,6;UBERON:0001137,1.06e-10,6;UBERON:0001948,5.37e-09,5;UBERON:0002315,5.37e-09,5;UBERON:0000369,4.33e-08,5;UBERON:0002435,4.33e-08,5;UBERON:0000204,4.33e-08,5;UBERON:0010082,4.33e-08,5;UBERON:0011216,6.45e-08,194;UBERON:0002950,7.76e-08,4;UBERON:0001891,7.76e-08,4;UBERON:0009616,7.76e-08,4;UBERON:0010286,7.76e-08,4;UBERON:0004733,1.13e-07,6;UBERON:0004732,1.13e-07,6;UBERON:0002028,1.13e-07,6;UBERON:0007277,1.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,2.63623419281366,2.13872888981712,0.699932108126813,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,2.53532561402472,0,0.889294796111139,0.449949858640699,0,0,2.09720077362883,0.384218305321555,0.207379224616955,0.540023753326763,0.630974884054146,12.8542942981712,10.8225585066291,0.244981598429908,0.670918297127655,0,14.3150645299205,18.5146640223522,12.7493422602682,3.69281605644543,5.39777097254217,5.73004707612436,12.8424179540635,9.00420176050688,8.55670187550137,8.83885756421003,7.54569908235246,3.91438836233131,0.302904773332736,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,0.561777680527007,2.04516387093669,1.55871602761721,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0,0.304465478312141,0.691846491768175,0.60289056221049,0.940709657085638,0,0,0.289198713839823,0,0,0,0.484875253135222,0,7.61230072230023,13.4045892360611,0.255457055208591,0,0,0.127070227073065,13.481157546434,7.32000964509802,1.50785222535437,2.08589184230732,2.81287003063364,19.5320761885986,11.0324058886075,0.101839363850316,0.124406970610093,0,0.631325567659422,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.612328492361951,0.512454881139399,0.468508622798644,1.03481348295606,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,1.47202963994889,1.74937841044784,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,15.0917554588524,11.4867452860359,1.3114795630134,0,0.315508219416257,0.390438744296638,0.430846795465598,0.955875191810208,0.222798674082394,0,0,0.584511715822624,0.395287777946524,2.57057053137446,0.567760340833074,0.35613120733451,0,0,0,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,0,1.70219802876894,0.18006109403131,0,0,0,0.356737635204141,1.48094118541909,9.13394847343798,0.23467170806371,0,0.441056796109924,0,0,0.0603129249281559,0.119372344003136,0,0,16.3174265769249,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,1.00314420807073,3.95326289831947,3.68260189205742,4.01026859407578,2.23409137046794,1.37016503954128,3.0215755895588,0,2.2516060161211,4.53142408984205,3.10656187051092,0.415149390336707,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0,0.758091635291392,0.50695859978048,0.565879024158229,0.37456602987953,0.640251524048693,0.459483751644906,0.952587382566147,1.0429589335037,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.470546902076653,0.338458431566706,0.548783918618318,1.05227884575137,0.407412341537585,0,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.701794825336225,1.50409737833809,0.956441660344217,0.441182838239031,0.463735671240843 | |||
|short_description=p6@Camk2n2 | |||
}} |
Revision as of 12:10, 13 September 2013
Short description: | p6@Camk2n2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Camk2n2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 48bp_to_NM_028420, uc007yqk.2_5end |
EntrezGene: | Camk2n2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.92e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.92e-18 | 23 |
neural cell | 3.95e-12 | 43 |
ectodermal cell | 1.01e-11 | 44 |
neurectodermal cell | 1.01e-11 | 44 |
neuron | 4.70e-11 | 33 |
neuronal stem cell | 4.70e-11 | 33 |
neuroblast | 4.70e-11 | 33 |
electrically signaling cell | 4.70e-11 | 33 |
electrically responsive cell | 1.19e-08 | 39 |
electrically active cell | 1.19e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.