FFCP PHASE1:Mm9::chr17:57219670..57219708,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:57219670..57219708,+|id=chr17:57219670..57219708,+|ontology_enrichment_celltype=CL:0000117!2.60e-16!23;CL:0000337!2.60e-16!23;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000393!2.49e-10!39;CL:0000211!2.49e-10!39;CL:0000221!1.46e-09!44;CL:0000133!1.46e-09!44;CL:0002319!1.77e-09!43;CL:0000055!5.62e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-30,23;CL:0000337,1.41e-30,23;CL:0000540,1.23e-19,33;CL:0000047,1.23e-19,33;CL:0000031,1.23e-19,33;CL:0000404,1.23e-19,33;CL:0002319,4.26e-17,43;CL:0000221,1.42e-16,44;CL:0000133,1.42e-16,44;CL:0000393,8.73e-16,39;CL:0000211,8.73e-16,39;CL:0002321,2.56e-08,70;CL:0002610,1.77e-07,3;CL:0002614,2.69e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.29e-28!75;UBERON:0001016!1.29e-28!75;UBERON:0001017!3.05e-28!73;UBERON:0005743!3.05e-28!73;UBERON:0001049!4.67e-28!52;UBERON:0005068!4.67e-28!52;UBERON:0006241!4.67e-28!52;UBERON:0007135!4.67e-28!52;UBERON:0002346!1.04e-27!71;UBERON:0003075!1.04e-27!71;UBERON:0007284!1.04e-27!71;UBERON:0004121!5.08e-27!102;UBERON:0000924!5.08e-27!102;UBERON:0006601!5.08e-27!102;UBERON:0000955!6.39e-27!50;UBERON:0006238!6.39e-27!50;UBERON:0000033!1.27e-26!63;UBERON:0002616!3.75e-26!49;UBERON:0003056!3.63e-24!49;UBERON:0003080!3.99e-22!40;UBERON:0002020!8.79e-22!34;UBERON:0002780!2.83e-21!39;UBERON:0001890!2.83e-21!39;UBERON:0006240!2.83e-21!39;UBERON:0002791!2.83e-18!29;UBERON:0003528!2.83e-18!29;UBERON:0001893!2.83e-18!29;UBERON:0007811!7.64e-15!86;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0000153!2.97e-12!94;UBERON:0002619!3.94e-10!17;UBERON:0000025!1.94e-09!114;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0004111!7.90e-08!122;UBERON:0002420!6.84e-07!8;UBERON:0007245!6.84e-07!8;UBERON:0010009!6.84e-07!8;UBERON:0010011!6.84e-07!8;UBERON:0000454!6.84e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-47,73;UBERON:0000073,9.79e-47,54;UBERON:0001016,7.24e-46,75;UBERON:0001049,7.39e-43,52;UBERON:0005068,7.39e-43,52;UBERON:0006241,7.39e-43,52;UBERON:0007135,7.39e-43,52;UBERON:0002020,4.85e-40,34;UBERON:0000955,9.42e-35,47;UBERON:0006238,9.42e-35,47;UBERON:0004121,4.27e-34,95;UBERON:0000924,4.27e-34,95;UBERON:0006601,4.27e-34,95;UBERON:0002616,3.32e-33,46;UBERON:0002346,4.15e-33,64;UBERON:0003075,4.15e-33,64;UBERON:0007284,4.15e-33,64;UBERON:0003528,4.12e-32,29;UBERON:0002791,4.12e-32,29;UBERON:0001893,4.12e-32,29;UBERON:0003080,1.81e-28,40;UBERON:0010371,6.71e-28,73;UBERON:0002780,8.72e-27,39;UBERON:0001890,8.72e-27,39;UBERON:0006240,8.72e-27,39;UBERON:0003056,6.24e-22,49;UBERON:0010314,2.97e-20,92;UBERON:0000956,1.28e-19,21;UBERON:0001869,1.28e-19,21;UBERON:0000203,1.28e-19,21;UBERON:0002021,4.58e-15,10;UBERON:0000411,4.58e-15,10;UBERON:0001950,4.58e-15,10;UBERON:0000025,1.35e-14,114;UBERON:0003076,1.79e-14,12;UBERON:0003057,1.79e-14,12;UBERON:0002619,3.69e-14,17;UBERON:0002420,6.29e-14,8;UBERON:0007245,6.29e-14,8;UBERON:0010009,6.29e-14,8;UBERON:0010011,6.29e-14,8;UBERON:0000454,6.29e-14,8;UBERON:0004111,4.77e-13,122;UBERON:0011216,1.83e-11,194;UBERON:0002240,5.73e-11,6;UBERON:0005174,5.73e-11,6;UBERON:0001137,5.73e-11,6;UBERON:0002950,3.89e-09,4;UBERON:0001891,3.89e-09,4;UBERON:0009616,3.89e-09,4;UBERON:0010286,3.89e-09,4;UBERON:0001948,5.82e-09,5;UBERON:0002315,5.82e-09,5;UBERON:0000369,2.65e-08,5;UBERON:0002435,2.65e-08,5;UBERON:0000204,2.65e-08,5;UBERON:0010082,2.65e-08,5;UBERON:0004684,1.77e-07,3;UBERON:0002275,1.77e-07,3;UBERON:0002038,2.69e-07,3;UBERON:0009663,2.69e-07,3;UBERON:0009661,2.69e-07,3;UBERON:0000125,2.69e-07,3;UBERON:0002308,2.69e-07,3|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.573066879877513,0,2.22548106945558,1.5869729378161,2.53532561402472,0,0,0,0,0,1.19840044207362,6.91592949578798,1.14058573539325,1.62007125998029,1.47227472945967,5.14171771926846,3.97563373712904,0.61245399607477,0.479227355091182,1.83843757322004,8.8092704799511,8.81042632787795,9.36999852863085,1.05509030184155,1.28082701043374,3.64639359389732,13.1216009530649,7.31591393041184,7.79271063661732,2.65165726926301,2.84743361598206,2.79599168737951,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.230615497256059,0.60289056221049,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,4.39171195517321,3.97948742945565,0,0,0,0,7.48953197024113,4.57500602818627,1.50785222535437,8.16974304903699,4.60287823194595,6.85700547046548,3.0825839982874,0.203678727700633,0,0,0,0.130120442962704,0.689706313300419,0.900310649026746,0.452114453507145,0.544291993210623,0.2562274405697,0.749613796477831,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0.219550115291051,0,6.09840850835969,1.3377599609307,0,0,0,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0.387904974335251,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0.690739927463582,0,0,0,0.491764273019036,0,10.9174401191699,6.44664276257117,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,4.17717711348349,0,0.35613120733451,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0.388076051348264,0.428674070063185,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0.704015124191131,0.63549621259146,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,14.0923229527987,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,1.31377732815827,0,0,0,5.0827665835536,6.44455331110048,6.30185064783336,8.42080593484069,0.685082519770642,8.3093328712867,6.07520250208625,5.40385443869065,3.17199686288943,5.1776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.17230640686684,0,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.953744759789284,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,1.49886346762768,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421|short_description=p@chr17:57219670..57219708,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:57219670..57219708,+ | |||
|id=chr17:57219670..57219708,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.60e-16!23;CL:0000337!2.60e-16!23;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000393!2.49e-10!39;CL:0000211!2.49e-10!39;CL:0000221!1.46e-09!44;CL:0000133!1.46e-09!44;CL:0002319!1.77e-09!43;CL:0000055!5.62e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-30,23;CL:0000337,1.41e-30,23;CL:0000540,1.23e-19,33;CL:0000047,1.23e-19,33;CL:0000031,1.23e-19,33;CL:0000404,1.23e-19,33;CL:0002319,4.26e-17,43;CL:0000221,1.42e-16,44;CL:0000133,1.42e-16,44;CL:0000393,8.73e-16,39;CL:0000211,8.73e-16,39;CL:0002321,2.56e-08,70;CL:0002610,1.77e-07,3;CL:0002614,2.69e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.29e-28!75;UBERON:0001016!1.29e-28!75;UBERON:0001017!3.05e-28!73;UBERON:0005743!3.05e-28!73;UBERON:0001049!4.67e-28!52;UBERON:0005068!4.67e-28!52;UBERON:0006241!4.67e-28!52;UBERON:0007135!4.67e-28!52;UBERON:0002346!1.04e-27!71;UBERON:0003075!1.04e-27!71;UBERON:0007284!1.04e-27!71;UBERON:0004121!5.08e-27!102;UBERON:0000924!5.08e-27!102;UBERON:0006601!5.08e-27!102;UBERON:0000955!6.39e-27!50;UBERON:0006238!6.39e-27!50;UBERON:0000033!1.27e-26!63;UBERON:0002616!3.75e-26!49;UBERON:0003056!3.63e-24!49;UBERON:0003080!3.99e-22!40;UBERON:0002020!8.79e-22!34;UBERON:0002780!2.83e-21!39;UBERON:0001890!2.83e-21!39;UBERON:0006240!2.83e-21!39;UBERON:0002791!2.83e-18!29;UBERON:0003528!2.83e-18!29;UBERON:0001893!2.83e-18!29;UBERON:0007811!7.64e-15!86;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0000153!2.97e-12!94;UBERON:0002619!3.94e-10!17;UBERON:0000025!1.94e-09!114;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0004111!7.90e-08!122;UBERON:0002420!6.84e-07!8;UBERON:0007245!6.84e-07!8;UBERON:0010009!6.84e-07!8;UBERON:0010011!6.84e-07!8;UBERON:0000454!6.84e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-47,73;UBERON:0000073,9.79e-47,54;UBERON:0001016,7.24e-46,75;UBERON:0001049,7.39e-43,52;UBERON:0005068,7.39e-43,52;UBERON:0006241,7.39e-43,52;UBERON:0007135,7.39e-43,52;UBERON:0002020,4.85e-40,34;UBERON:0000955,9.42e-35,47;UBERON:0006238,9.42e-35,47;UBERON:0004121,4.27e-34,95;UBERON:0000924,4.27e-34,95;UBERON:0006601,4.27e-34,95;UBERON:0002616,3.32e-33,46;UBERON:0002346,4.15e-33,64;UBERON:0003075,4.15e-33,64;UBERON:0007284,4.15e-33,64;UBERON:0003528,4.12e-32,29;UBERON:0002791,4.12e-32,29;UBERON:0001893,4.12e-32,29;UBERON:0003080,1.81e-28,40;UBERON:0010371,6.71e-28,73;UBERON:0002780,8.72e-27,39;UBERON:0001890,8.72e-27,39;UBERON:0006240,8.72e-27,39;UBERON:0003056,6.24e-22,49;UBERON:0010314,2.97e-20,92;UBERON:0000956,1.28e-19,21;UBERON:0001869,1.28e-19,21;UBERON:0000203,1.28e-19,21;UBERON:0002021,4.58e-15,10;UBERON:0000411,4.58e-15,10;UBERON:0001950,4.58e-15,10;UBERON:0000025,1.35e-14,114;UBERON:0003076,1.79e-14,12;UBERON:0003057,1.79e-14,12;UBERON:0002619,3.69e-14,17;UBERON:0002420,6.29e-14,8;UBERON:0007245,6.29e-14,8;UBERON:0010009,6.29e-14,8;UBERON:0010011,6.29e-14,8;UBERON:0000454,6.29e-14,8;UBERON:0004111,4.77e-13,122;UBERON:0011216,1.83e-11,194;UBERON:0002240,5.73e-11,6;UBERON:0005174,5.73e-11,6;UBERON:0001137,5.73e-11,6;UBERON:0002950,3.89e-09,4;UBERON:0001891,3.89e-09,4;UBERON:0009616,3.89e-09,4;UBERON:0010286,3.89e-09,4;UBERON:0001948,5.82e-09,5;UBERON:0002315,5.82e-09,5;UBERON:0000369,2.65e-08,5;UBERON:0002435,2.65e-08,5;UBERON:0000204,2.65e-08,5;UBERON:0010082,2.65e-08,5;UBERON:0004684,1.77e-07,3;UBERON:0002275,1.77e-07,3;UBERON:0002038,2.69e-07,3;UBERON:0009663,2.69e-07,3;UBERON:0009661,2.69e-07,3;UBERON:0000125,2.69e-07,3;UBERON:0002308,2.69e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.573066879877513,0,2.22548106945558,1.5869729378161,2.53532561402472,0,0,0,0,0,1.19840044207362,6.91592949578798,1.14058573539325,1.62007125998029,1.47227472945967,5.14171771926846,3.97563373712904,0.61245399607477,0.479227355091182,1.83843757322004,8.8092704799511,8.81042632787795,9.36999852863085,1.05509030184155,1.28082701043374,3.64639359389732,13.1216009530649,7.31591393041184,7.79271063661732,2.65165726926301,2.84743361598206,2.79599168737951,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.230615497256059,0.60289056221049,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,4.39171195517321,3.97948742945565,0,0,0,0,7.48953197024113,4.57500602818627,1.50785222535437,8.16974304903699,4.60287823194595,6.85700547046548,3.0825839982874,0.203678727700633,0,0,0,0.130120442962704,0.689706313300419,0.900310649026746,0.452114453507145,0.544291993210623,0.2562274405697,0.749613796477831,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0.219550115291051,0,6.09840850835969,1.3377599609307,0,0,0,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0.387904974335251,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0.690739927463582,0,0,0,0.491764273019036,0,10.9174401191699,6.44664276257117,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,4.17717711348349,0,0.35613120733451,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0.388076051348264,0.428674070063185,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0.704015124191131,0.63549621259146,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,14.0923229527987,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,1.31377732815827,0,0,0,5.0827665835536,6.44455331110048,6.30185064783336,8.42080593484069,0.685082519770642,8.3093328712867,6.07520250208625,5.40385443869065,3.17199686288943,5.1776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.512201219238954,0.17230640686684,0,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.953744759789284,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,1.49886346762768,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr17:57219670..57219708,+ | |||
}} |
Revision as of 15:01, 13 September 2013
Short description: | p@chr17:57219670..57219708, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57219670..57219708, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.41e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.41e-30 | 23 |
neuron | 1.23e-19 | 33 |
neuronal stem cell | 1.23e-19 | 33 |
neuroblast | 1.23e-19 | 33 |
electrically signaling cell | 1.23e-19 | 33 |
neural cell | 4.26e-17 | 43 |
ectodermal cell | 1.42e-16 | 44 |
neurectodermal cell | 1.42e-16 | 44 |
electrically responsive cell | 8.73e-16 | 39 |
electrically active cell | 8.73e-16 | 39 |
embryonic cell | 2.56e-08 | 70 |
raphe nuclei neuron | 1.77e-07 | 3 |
neuron of the substantia nigra | 2.69e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.